Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1184
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   4.0  
AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding pr...    24   5.3  
AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-li...    24   5.3  
U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...    23   9.2  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    23   9.2  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 543 QFVFDSVSSYIVIEPFFYDRYVLDG 617
           QF FD     + + P+ Y+R V  G
Sbjct: 115 QFAFDLKCDSVCVNPYHYERVVSPG 139


>AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP5 protein.
          Length = 156

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 236 YDFILQLVSLFFL*Y*DDEC 177
           +DFIL LV+ FF+ +   EC
Sbjct: 14  WDFILGLVAFFFIPFPSVEC 33


>AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-like
           protein protein.
          Length = 219

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -3

Query: 608 NIPVIEKWLDDYVARYGVKD 549
           N+P+   W+DD++ +  + D
Sbjct: 194 NVPMFRGWIDDHLRQRNITD 213


>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/47 (21%), Positives = 23/47 (48%)
 Frame = -2

Query: 558 SQRRIVGSKXMISQSL*IRWVLTILKFIEMHYLVYLKRNASLKGSEK 418
           S   ++ +K ++  ++ +       ++ E HYL+ L +   LK  E+
Sbjct: 15  SNNELIRTKTLVKNAIIVIDASPFRQWYESHYLLPLGKKRELKAGEE 61


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/20 (45%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +3

Query: 558 SVSSYIVI-EPFFYDRYVLD 614
           ++  YI + +PFFY +YV D
Sbjct: 154 ALERYIALAKPFFYHKYVTD 173


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,265
Number of Sequences: 2352
Number of extensions: 9830
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)