Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1181
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071743-1|AAL49365.2|  198|Drosophila melanogaster RH48588p pro...    81   1e-15
AY113564-1|AAM29569.1|  179|Drosophila melanogaster RH09246p pro...    81   2e-15
AE013599-3623|AAM68253.1|  179|Drosophila melanogaster CG30185-P...    81   2e-15
AY118522-1|AAM49891.1|  225|Drosophila melanogaster LD18692p pro...    30   2.6  
AE013599-2712|AAF57679.1|  225|Drosophila melanogaster CG5224-PA...    30   2.6  

>AY071743-1|AAL49365.2|  198|Drosophila melanogaster RH48588p
           protein.
          Length = 198

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 7/172 (4%)
 Frame = -3

Query: 662 MSINNVDVIKMIGKYLDVSVGAVCYNTDKVPXAVL-ENKNVEGFVTIILSMAS--KCGTA 492
           +++ +V  ++ I   L V+ G V  N ++V      + K+V GF +I+ S+AS  K  TA
Sbjct: 18  LTMCDVATVQKIANCLGVNPGKVQLNEEQVVTRTSGQKKSVAGFASILESLASESKSETA 77

Query: 491 ----SSEEQRLLTYQWLEYXSMFSNXAVANSTFAFKXLQEINRAXQSNXYXTGQFLTIAD 324
               +S E     YQW+E+  ++      +   + + L + N+   S  Y  G F+T+AD
Sbjct: 78  QNSRASREVEAQVYQWIEFSVLYVAPGSKDKYVSKQLLADFNKLFASKSYLVGHFITLAD 137

Query: 323 VALYYIVYPLLEHMXVAEXDAFVXLCRWSKHIQAQPRVCHNXPPLPLNAVSL 168
           +A+YY +Y L++ +   + + ++ L RW  H+Q +  V    P L    + L
Sbjct: 138 LAVYYAIYDLVKSLSPVDKEVYLNLSRWFDHLQNRADVHQGEPLLNFTTIYL 189


>AY113564-1|AAM29569.1|  179|Drosophila melanogaster RH09246p
           protein.
          Length = 179

 Score = 80.6 bits (190), Expect = 2e-15
 Identities = 48/168 (28%), Positives = 84/168 (50%), Gaps = 7/168 (4%)
 Frame = -3

Query: 650 NVDVIKMIGKYLDVSVGAVCYNTDKVPXAVL-ENKNVEGFVTIILSMAS--KCGTA---- 492
           +V  ++ I   L V+ G V  N ++V      + K+V GF +I+ S+AS  K  TA    
Sbjct: 3   DVATVQKIANCLGVNPGKVQLNEEQVVTRTSGQKKSVAGFASILESLASESKSETAQNSR 62

Query: 491 SSEEQRLLTYQWLEYXSMFSNXAVANSTFAFKXLQEINRAXQSNXYXTGQFLTIADVALY 312
           +S E     YQW+E+  ++      +   + + L + N+   S  Y  G F+T+AD+A+Y
Sbjct: 63  ASREVEAQVYQWIEFSVLYVAPGSKDKYVSKQLLADFNKLFASKSYLVGHFITLADLAVY 122

Query: 311 YIVYPLLEHMXVAEXDAFVXLCRWSKHIQAQPRVCHNXPPLPLNAVSL 168
           Y +Y L++ +   + + ++ L RW  H+Q +  V    P L    + L
Sbjct: 123 YAIYDLVKSLSPVDKEVYLNLSRWFDHLQNRADVHQGEPLLNFTTIYL 170


>AE013599-3623|AAM68253.1|  179|Drosophila melanogaster CG30185-PA
           protein.
          Length = 179

 Score = 80.6 bits (190), Expect = 2e-15
 Identities = 48/168 (28%), Positives = 84/168 (50%), Gaps = 7/168 (4%)
 Frame = -3

Query: 650 NVDVIKMIGKYLDVSVGAVCYNTDKVPXAVL-ENKNVEGFVTIILSMAS--KCGTA---- 492
           +V  ++ I   L V+ G V  N ++V      + K+V GF +I+ S+AS  K  TA    
Sbjct: 3   DVATVQKIANCLGVNPGKVQLNEEQVVTRTSGQKKSVAGFASILESLASESKSETAQNSR 62

Query: 491 SSEEQRLLTYQWLEYXSMFSNXAVANSTFAFKXLQEINRAXQSNXYXTGQFLTIADVALY 312
           +S E     YQW+E+  ++      +   + + L + N+   S  Y  G F+T+AD+A+Y
Sbjct: 63  ASREVEAQVYQWIEFSVLYVAPGSKDKYVSKQLLADFNKLFASKSYLVGHFITLADLAVY 122

Query: 311 YIVYPLLEHMXVAEXDAFVXLCRWSKHIQAQPRVCHNXPPLPLNAVSL 168
           Y +Y L++ +   + + ++ L RW  H+Q +  V    P L    + L
Sbjct: 123 YAIYDLVKSLSPVDKEVYLNLSRWFDHLQNRADVHQGEPLLNFTTIYL 170


>AY118522-1|AAM49891.1|  225|Drosophila melanogaster LD18692p
           protein.
          Length = 225

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = -3

Query: 356 YXTGQFLTIADVALYYIVYPLLEHMXVAEXDAFVXLCRWSKHIQAQP 216
           Y  G  LTIAD++    V    E     E D F  L +W K IQA P
Sbjct: 153 YLVGDKLTIADLSCIASV-STAEAFAPIEPDQFPRLVQWVKRIQALP 198


>AE013599-2712|AAF57679.1|  225|Drosophila melanogaster CG5224-PA
           protein.
          Length = 225

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = -3

Query: 356 YXTGQFLTIADVALYYIVYPLLEHMXVAEXDAFVXLCRWSKHIQAQP 216
           Y  G  LTIAD++    V    E     E D F  L +W K IQA P
Sbjct: 153 YLVGDKLTIADLSCIASV-STAEAFAPIEPDQFPRLVQWVKRIQALP 198


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,285,793
Number of Sequences: 53049
Number of extensions: 468169
Number of successful extensions: 687
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)