Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1180
(690 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 134 8e-32
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 133 1e-31
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 133 1e-31
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 133 1e-31
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 133 1e-31
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 130 1e-30
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 128 3e-30
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 127 9e-30
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 118 6e-27
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 62 3e-10
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 59 4e-09
12_02_1282 + 27528159-27529148,27529549-27529614 58 5e-09
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 52 3e-07
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 46 3e-05
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 45 5e-05
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 44 2e-04
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 34 0.12
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 31 1.1
07_03_0752 - 21241883-21242233,21242336-21242486,21242586-212428... 30 1.5
07_03_0008 + 12303536-12303893,12303910-12304176,12304635-123049... 30 2.0
08_02_0238 + 14665813-14668798,14669088-14669125 29 3.5
11_06_0126 - 20378611-20379719,20380081-20381239 29 4.6
05_01_0179 - 1240271-1241600,1241713-1241765 29 4.6
12_01_0748 - 6728221-6728305,6728788-6728842,6729202-6729289,672... 28 6.1
04_04_1402 + 33287844-33287963,33288049-33288155,33288877-332889... 28 6.1
09_04_0436 - 17558603-17559265,17559322-17559384 28 8.0
09_02_0456 - 9525067-9525422,9525679-9528226 28 8.0
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 134 bits (323), Expect = 8e-32
Identities = 61/67 (91%), Positives = 64/67 (95%)
Frame = -3
Query: 496 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGP 317
GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASL TFQQMWISK EYDESGP
Sbjct: 307 GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGP 366
Query: 316 SIVHRKC 296
SIVHRKC
Sbjct: 367 SIVHRKC 373
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/65 (49%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = -2
Query: 689 GQVITIGNERFRCPXAXFPTFVLGMEACGIXETT**LHP*SATWTSVR-TCTPTPVLSGG 513
GQVITIG ERFRCP F ++GMEA GI ETT + +R VLSGG
Sbjct: 244 GQVITIGAERFRCPEVLFQPSLIGMEAPGIHETT--YNSIMKCDVDIRKDLYGNIVLSGG 301
Query: 512 TTHVP 498
TT P
Sbjct: 302 TTMFP 306
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 133 bits (322), Expect = 1e-31
Identities = 60/67 (89%), Positives = 64/67 (95%)
Frame = -3
Query: 496 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGP 317
GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASL TFQQMWISK EYDESGP
Sbjct: 310 GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGP 369
Query: 316 SIVHRKC 296
+IVHRKC
Sbjct: 370 AIVHRKC 376
Score = 51.2 bits (117), Expect = 8e-07
Identities = 32/65 (49%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = -2
Query: 689 GQVITIGNERFRCPXAXFPTFVLGMEACGIXETT**LHP*SATWTSVR-TCTPTPVLSGG 513
GQVITIG ERFRCP F ++GMEA GI ETT + +R VLSGG
Sbjct: 247 GQVITIGAERFRCPEVLFQPSMIGMEAAGIHETT--YNSIMKCDVDIRKDLYGNIVLSGG 304
Query: 512 TTHVP 498
TT P
Sbjct: 305 TTMFP 309
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 133 bits (322), Expect = 1e-31
Identities = 60/67 (89%), Positives = 64/67 (95%)
Frame = -3
Query: 496 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGP 317
GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASL TFQQMWISK EYDESGP
Sbjct: 310 GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGP 369
Query: 316 SIVHRKC 296
+IVHRKC
Sbjct: 370 AIVHRKC 376
Score = 51.6 bits (118), Expect = 6e-07
Identities = 31/65 (47%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = -2
Query: 689 GQVITIGNERFRCPXAXFPTFVLGMEACGIXETT**LHP*SATWTSVR-TCTPTPVLSGG 513
GQVITIG+ERFRCP F ++GME+ GI ETT + +R VLSGG
Sbjct: 247 GQVITIGSERFRCPEVLFQPSMIGMESAGIHETT--YNSIMKCDVDIRKDLYGNVVLSGG 304
Query: 512 TTHVP 498
TT P
Sbjct: 305 TTMFP 309
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 133 bits (321), Expect = 1e-31
Identities = 60/67 (89%), Positives = 64/67 (95%)
Frame = -3
Query: 496 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGP 317
GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASL TFQQMWISK EYDESGP
Sbjct: 313 GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGP 372
Query: 316 SIVHRKC 296
+IVHRKC
Sbjct: 373 AIVHRKC 379
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -2
Query: 689 GQVITIGNERFRCPXAXFPTFVLGMEACGIXETT 588
GQVITIG ERFRCP F ++GMEA GI ETT
Sbjct: 250 GQVITIGAERFRCPEVLFQPSLVGMEAAGIHETT 283
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1
Query: 573 MKCDVDIRKDLYAN 532
MKCDVDIRKDLY N
Sbjct: 288 MKCDVDIRKDLYGN 301
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 133 bits (321), Expect = 1e-31
Identities = 60/67 (89%), Positives = 64/67 (95%)
Frame = -3
Query: 496 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGP 317
GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASL TFQQMWI+K EYDESGP
Sbjct: 310 GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGP 369
Query: 316 SIVHRKC 296
SIVHRKC
Sbjct: 370 SIVHRKC 376
Score = 50.4 bits (115), Expect = 1e-06
Identities = 32/65 (49%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = -2
Query: 689 GQVITIGNERFRCPXAXFPTFVLGMEACGIXETT**LHP*SATWTSVR-TCTPTPVLSGG 513
GQVITIG ERFRCP F +GMEA GI ETT + +R VLSGG
Sbjct: 247 GQVITIGAERFRCPEVLFQPSFIGMEAAGIHETT--YNSIMKCDVDIRKDLYGNIVLSGG 304
Query: 512 TTHVP 498
TT P
Sbjct: 305 TTMFP 309
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 130 bits (314), Expect = 1e-30
Identities = 58/67 (86%), Positives = 64/67 (95%)
Frame = -3
Query: 496 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGP 317
GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASL TFQQMWIS+ EY+ESGP
Sbjct: 310 GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESGP 369
Query: 316 SIVHRKC 296
+IVHRKC
Sbjct: 370 AIVHRKC 376
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -2
Query: 689 GQVITIGNERFRCPXAXFPTFVLGMEACGIXETT 588
GQVITIG ERFRCP F ++GMEA GI ETT
Sbjct: 247 GQVITIGAERFRCPEVMFQPSLIGMEAPGIHETT 280
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1
Query: 573 MKCDVDIRKDLYAN 532
MKCDVDIRKDLY N
Sbjct: 285 MKCDVDIRKDLYGN 298
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 128 bits (310), Expect = 3e-30
Identities = 58/67 (86%), Positives = 62/67 (92%)
Frame = -3
Query: 496 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGP 317
GIADRM KEIT+LAPS+MK+K+IAPPERKYSVWIGGSILASL TFQQMWISK EYDESGP
Sbjct: 309 GIADRMSKEITSLAPSSMKVKVIAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGP 368
Query: 316 SIVHRKC 296
IVH KC
Sbjct: 369 GIVHMKC 375
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = -2
Query: 689 GQVITIGNERFRCPXAXFPTFVLGMEACGIXETT 588
GQVITIG+ERFRCP F ++GME+ GI E T
Sbjct: 246 GQVITIGSERFRCPEVLFQPSLVGMESPGIHEAT 279
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1
Query: 573 MKCDVDIRKDLYAN 532
MKCDVDIRKDLY N
Sbjct: 284 MKCDVDIRKDLYGN 297
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 127 bits (306), Expect = 9e-30
Identities = 57/67 (85%), Positives = 60/67 (89%)
Frame = -3
Query: 496 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGP 317
GI DRM KEITALAP +MKIK++APPERKYSVWIGGSILASL TFQQMWISK EYDESGP
Sbjct: 309 GIGDRMSKEITALAPGSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGP 368
Query: 316 SIVHRKC 296
IVH KC
Sbjct: 369 GIVHMKC 375
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -2
Query: 689 GQVITIGNERFRCPXAXFPTFVLGMEACGIXETT 588
GQVITIG ERFRCP F +GMEA GI E T
Sbjct: 246 GQVITIGAERFRCPEVLFQPSFIGMEAPGIHEAT 279
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1
Query: 573 MKCDVDIRKDLYAN 532
MKCDVDIRKDLY N
Sbjct: 284 MKCDVDIRKDLYGN 297
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 118 bits (283), Expect = 6e-27
Identities = 60/81 (74%), Positives = 64/81 (79%), Gaps = 14/81 (17%)
Frame = -3
Query: 496 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQ-------------- 359
GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASL TFQ
Sbjct: 310 GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNLTPTLYEVARM 369
Query: 358 QMWISKQEYDESGPSIVHRKC 296
QMWISK EYDESGP+IVHRKC
Sbjct: 370 QMWISKGEYDESGPAIVHRKC 390
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = -2
Query: 689 GQVITIGNERFRCPXAXFPTFVLGMEACGIXETT 588
GQVITIG ERFRCP F +GMEA GI ETT
Sbjct: 247 GQVITIGAERFRCPEVLFQPSFIGMEAPGIHETT 280
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1
Query: 573 MKCDVDIRKDLYAN 532
MKCDVDIRKDLY N
Sbjct: 285 MKCDVDIRKDLYGN 298
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Frame = -3
Query: 496 GIADRMQKEITALAPSTMKIKIIAPPE------RKYSVWIGGSILASLXTFQQMWISKQE 335
G DR Q+E L+ S + ++ PPE +YS W+GG+ILA + Q ++K +
Sbjct: 326 GFEDRFQREAN-LSASAICPSLVKPPEYMPENLARYSAWLGGAILAKVVFPQNQHVTKGD 384
Query: 334 YDESGPSIVHRKC 296
YDE+GPSIVH+KC
Sbjct: 385 YDETGPSIVHKKC 397
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2
Query: 689 GQVITIGNERFRCPXAXFPTFVLGMEACGI 600
GQVITI ER+ A F +LG+E GI
Sbjct: 263 GQVITIEKERYIVGEALFQPHILGLEDYGI 292
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/56 (46%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
Frame = -3
Query: 493 IADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLXTFQQMWISKQE 335
+ +R++KE+ + ++K++A ER++SVWIGGSILASL +FQQMW SK +
Sbjct: 414 LKERLEKEVLEESSGNTRVKVLASGNSVERRFSVWIGGSILASLGSFQQMWFSKAD 469
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 58.4 bits (135), Expect = 5e-09
Identities = 37/67 (55%), Positives = 39/67 (58%)
Frame = -3
Query: 496 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGP 317
GIADRM KEITALAPS+MKIK MWI+K EYDESGP
Sbjct: 310 GIADRMSKEITALAPSSMKIK--------------------------MWIAKAEYDESGP 343
Query: 316 SIVHRKC 296
SIVHRKC
Sbjct: 344 SIVHRKC 350
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/65 (49%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = -2
Query: 689 GQVITIGNERFRCPXAXFPTFVLGMEACGIXETT**LHP*SATWTSVR-TCTPTPVLSGG 513
GQVITIG ERFRCP F +GMEA GI ETT + +R VLSGG
Sbjct: 247 GQVITIGAERFRCPEVLFQPSFVGMEAAGIHETT--YNSIMKCDVDIRKDLYGNIVLSGG 304
Query: 512 TTHVP 498
TT P
Sbjct: 305 TTMFP 309
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = -3
Query: 487 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIV 308
+R++KE+ L P ++KIIA + W GGS+LA F+ M I+K EY+E G
Sbjct: 364 ERLEKELRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRC 423
Query: 307 HRK 299
R+
Sbjct: 424 RRR 426
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/45 (40%), Positives = 31/45 (68%)
Frame = -3
Query: 445 MKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSI 311
+++ +++ P ++Y+VW GGS+LAS F + +K EY+E G SI
Sbjct: 418 IEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 462
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/71 (30%), Positives = 44/71 (61%), Gaps = 7/71 (9%)
Frame = -3
Query: 496 GIADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSILASLXTFQQMW-ISKQEYDE 326
G+++R++KE+ L P+ + I++I PP S W G +++++ TF + W I K+++ +
Sbjct: 412 GLSERLEKELRELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVSTFTEAWCIKKKQFRQ 471
Query: 325 ----SGPSIVH 305
+GPS V+
Sbjct: 472 KTRRNGPSFVN 482
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = -3
Query: 445 MKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSI 311
+++ ++A P + Y+ W GGS+ AS F + +K+EY+E G SI
Sbjct: 385 VEVNVVAHPIQSYAAWFGGSVAASNPEFYESCHTKEEYEEHGASI 429
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = -3
Query: 496 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGP 317
G+ R++ I P +K++ + W G + A+ F + S +Y E G
Sbjct: 637 GMIPRLESGIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAASSKFGRHTFSLADYREHGE 696
Query: 316 SIVHRK 299
++ HRK
Sbjct: 697 NLFHRK 702
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -2
Query: 680 ITIGNERFRCPXAXFPTFVLGMEACGIXE 594
I+IG ERFRCP F ++G++ GI E
Sbjct: 575 ISIGIERFRCPEILFQPGMIGIDQAGIDE 603
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/25 (40%), Positives = 20/25 (80%)
Frame = -3
Query: 445 MKIKIIAPPERKYSVWIGGSILASL 371
++++I PP RK+ V++GG++LA +
Sbjct: 366 LRLRIEDPPRRKHMVYLGGAVLAGI 390
>07_03_0752 -
21241883-21242233,21242336-21242486,21242586-21242823,
21242917-21243127,21243214-21243344,21245046-21245931,
21246087-21246140,21246397-21246461,21246842-21246892,
21246960-21247029,21247493-21247597
Length = 770
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 258 RAAGGSDARCVXKHFLCTMEGPDS 329
RAAGG ARC+ LC E P S
Sbjct: 675 RAAGGEIARCIHVGLLCVQENPAS 698
>07_03_0008 +
12303536-12303893,12303910-12304176,12304635-12304951,
12304975-12305819,12305859-12306069
Length = 665
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +3
Query: 258 RAAGGSDARCVXKHFLCTM----EGPDSSYSCFEIHICWK 365
RA G CV + FLCT+ +G + C E H+ WK
Sbjct: 301 RALGWDKFACVDEPFLCTLLKVGDGVNFRLFCKEYHLSWK 340
>08_02_0238 + 14665813-14668798,14669088-14669125
Length = 1007
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 389 STDPYGVLPLWRSNDLNLHCRW-GESC 466
S DP G L W+ ND CRW G +C
Sbjct: 62 SNDPGGFLGSWKQNDSIGFCRWPGVTC 88
>11_06_0126 - 20378611-20379719,20380081-20381239
Length = 755
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 389 STDPYGVLPLWRSNDLNLHCRW-GESCDFLLHTVGDSRVHGWY 514
++DP G+L W+ +D + CRW G +C L V ++G Y
Sbjct: 48 TSDPLGLLTSWKEDDHDC-CRWRGVTCSNLTGHVLRLHLNGGY 89
>05_01_0179 - 1240271-1241600,1241713-1241765
Length = 460
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 600 PR-DHIITPSMKCDVDIRKDLYANPRIVRWYHPCTLESPTVC 478
PR +H++ K + + L+ RIV + PCTLE VC
Sbjct: 409 PRLEHVLESGRKAPLLVDISLFHLGRIVPFARPCTLEEYLVC 450
>12_01_0748 -
6728221-6728305,6728788-6728842,6729202-6729289,
6729681-6729818,6729978-6730142,6730235-6730354,
6730555-6730631,6730738-6731113,6731523-6732617
Length = 732
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 356 LLEGXEGGEDRSTDPYGVLPLWRSNDLNLHCRWG 457
+L+ E S P +LPL NDL+ RWG
Sbjct: 402 VLDAIEKQNYESPPPVSILPLGTGNDLSRVMRWG 435
>04_04_1402 +
33287844-33287963,33288049-33288155,33288877-33288956,
33289133-33289225,33289332-33289471,33289580-33289672,
33289769-33289836,33290108-33290111
Length = 234
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +2
Query: 407 VLPLWRSNDLNLHCRWGESCDFLLHTVGDSRVHGWYHRTIRGLAY 541
+LP W +L C W ++ F + + + VH +T+R + Y
Sbjct: 54 LLPGWAGGELAETCSWADTERFRGNRLPELSVHAMIDKTLRTIMY 98
>09_04_0436 - 17558603-17559265,17559322-17559384
Length = 241
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -2
Query: 569 SATWTSVRTCTPTPVLSGGTTHVPWNRRPYAKGNHSSR 456
SAT + TPTP LS TT P R P ++ + + R
Sbjct: 168 SATPPPNASATPTPSLSWRTTPPPCQRHPSSRASRAVR 205
>09_02_0456 - 9525067-9525422,9525679-9528226
Length = 967
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +2
Query: 392 TDPYGVLPLWRSNDLNLHCRWGE-SCDFLL--HTVGDSRVHGWY 514
TDP L WR +DL CRW +CD V D V G Y
Sbjct: 46 TDPTAALSAWRGDDL---CRWPHVACDAAAGNAAVSDGVVAGLY 86
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,110,463
Number of Sequences: 37544
Number of extensions: 378182
Number of successful extensions: 929
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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