Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1176
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         262   6e-72
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         262   6e-72
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         262   6e-72
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          238   1e-64
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        23   7.0  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   9.2  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  262 bits (643), Expect = 6e-72
 Identities = 123/132 (93%), Positives = 123/132 (93%)
 Frame = -3

Query: 692 PXGQVITIGNERFRCPEXXFPTFVLGMEACGIHETTYNSIMKCDVDIXKDLYANTVLSGG 513
           P GQVITIGNERFRCPE  F    LGMEACGIHETTYNSIMKCDVDI KDLYANTVLSGG
Sbjct: 244 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 303

Query: 512 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEY 333
           TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363

Query: 332 DESGPSIVHRKC 297
           DESGPSIVHRKC
Sbjct: 364 DESGPSIVHRKC 375


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  262 bits (643), Expect = 6e-72
 Identities = 123/132 (93%), Positives = 123/132 (93%)
 Frame = -3

Query: 692 PXGQVITIGNERFRCPEXXFPTFVLGMEACGIHETTYNSIMKCDVDIXKDLYANTVLSGG 513
           P GQVITIGNERFRCPE  F    LGMEACGIHETTYNSIMKCDVDI KDLYANTVLSGG
Sbjct: 244 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 303

Query: 512 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEY 333
           TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363

Query: 332 DESGPSIVHRKC 297
           DESGPSIVHRKC
Sbjct: 364 DESGPSIVHRKC 375


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  262 bits (643), Expect = 6e-72
 Identities = 123/132 (93%), Positives = 123/132 (93%)
 Frame = -3

Query: 692 PXGQVITIGNERFRCPEXXFPTFVLGMEACGIHETTYNSIMKCDVDIXKDLYANTVLSGG 513
           P GQVITIGNERFRCPE  F    LGMEACGIHETTYNSIMKCDVDI KDLYANTVLSGG
Sbjct: 244 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 303

Query: 512 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEY 333
           TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363

Query: 332 DESGPSIVHRKC 297
           DESGPSIVHRKC
Sbjct: 364 DESGPSIVHRKC 375


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  238 bits (583), Expect = 1e-64
 Identities = 111/132 (84%), Positives = 116/132 (87%)
 Frame = -3

Query: 692 PXGQVITIGNERFRCPEXXFPTFVLGMEACGIHETTYNSIMKCDVDIXKDLYANTVLSGG 513
           P GQVITIGNERFR PE  F    LGME+ GIHET YNSIM+CDVDI KDLYAN+VLSGG
Sbjct: 244 PDGQVITIGNERFRAPEALFQPSFLGMESTGIHETVYNSIMRCDVDIRKDLYANSVLSGG 303

Query: 512 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEY 333
           TTMYPGIADRMQKEIT+LAPST+KIKIIAPPERKYSVWIGGSILASL TFQ MWISK EY
Sbjct: 304 TTMYPGIADRMQKEITSLAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQTMWISKHEY 363

Query: 332 DESGPSIVHRKC 297
           DE GP IVHRKC
Sbjct: 364 DEGGPGIVHRKC 375


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -1

Query: 313 LYTGSAXKRTARRCLQQPAAGCSIQA 236
           LY GSA +    R LQQ  +G + QA
Sbjct: 78  LYEGSASRSETERELQQALSGGNSQA 103


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 390  IDPRLPLYLPTDVDLETGVRRVW 322
            +DP + LYL T+  L+ G +  W
Sbjct: 1188 LDPDIRLYLKTNTYLQWGDKLFW 1210


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,682
Number of Sequences: 2352
Number of extensions: 12848
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)