Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1176
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 255 2e-68
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 255 2e-68
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 255 2e-68
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 255 2e-68
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 255 2e-68
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 255 2e-68
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 255 2e-68
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 255 2e-68
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 255 2e-68
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 249 1e-66
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 246 1e-65
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 130 1e-30
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 111 6e-25
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 109 1e-24
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 87 9e-18
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 81 6e-16
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 63 2e-10
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 45 6e-05
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.60
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.60
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.60
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 29 3.2
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 29 3.2
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL110484-22|CAB54414.2| 305|Caenorhabditis elegans Hypothetical... 28 7.4
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 255 bits (625), Expect = 2e-68
Identities = 118/132 (89%), Positives = 122/132 (92%)
Frame = -3
Query: 692 PXGQVITIGNERFRCPEXXFPTFVLGMEACGIHETTYNSIMKCDVDIXKDLYANTVLSGG 513
P GQVIT+GNERFRCPE F LGME+ GIHET+YNSIMKCD+DI KDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 512 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEY 333
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 332 DESGPSIVHRKC 297
DESGPSIVHRKC
Sbjct: 364 DESGPSIVHRKC 375
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 255 bits (625), Expect = 2e-68
Identities = 118/132 (89%), Positives = 122/132 (92%)
Frame = -3
Query: 692 PXGQVITIGNERFRCPEXXFPTFVLGMEACGIHETTYNSIMKCDVDIXKDLYANTVLSGG 513
P GQVIT+GNERFRCPE F LGME+ GIHET+YNSIMKCD+DI KDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 512 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEY 333
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 332 DESGPSIVHRKC 297
DESGPSIVHRKC
Sbjct: 364 DESGPSIVHRKC 375
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 255 bits (625), Expect = 2e-68
Identities = 118/132 (89%), Positives = 122/132 (92%)
Frame = -3
Query: 692 PXGQVITIGNERFRCPEXXFPTFVLGMEACGIHETTYNSIMKCDVDIXKDLYANTVLSGG 513
P GQVIT+GNERFRCPE F LGME+ GIHET+YNSIMKCD+DI KDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 512 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEY 333
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 332 DESGPSIVHRKC 297
DESGPSIVHRKC
Sbjct: 364 DESGPSIVHRKC 375
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 255 bits (625), Expect = 2e-68
Identities = 118/132 (89%), Positives = 122/132 (92%)
Frame = -3
Query: 692 PXGQVITIGNERFRCPEXXFPTFVLGMEACGIHETTYNSIMKCDVDIXKDLYANTVLSGG 513
P GQVIT+GNERFRCPE F LGME+ GIHET+YNSIMKCD+DI KDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 512 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEY 333
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 332 DESGPSIVHRKC 297
DESGPSIVHRKC
Sbjct: 364 DESGPSIVHRKC 375
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 255 bits (625), Expect = 2e-68
Identities = 118/132 (89%), Positives = 122/132 (92%)
Frame = -3
Query: 692 PXGQVITIGNERFRCPEXXFPTFVLGMEACGIHETTYNSIMKCDVDIXKDLYANTVLSGG 513
P GQVIT+GNERFRCPE F LGME+ GIHET+YNSIMKCD+DI KDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 512 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEY 333
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 332 DESGPSIVHRKC 297
DESGPSIVHRKC
Sbjct: 364 DESGPSIVHRKC 375
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 255 bits (625), Expect = 2e-68
Identities = 118/132 (89%), Positives = 122/132 (92%)
Frame = -3
Query: 692 PXGQVITIGNERFRCPEXXFPTFVLGMEACGIHETTYNSIMKCDVDIXKDLYANTVLSGG 513
P GQVIT+GNERFRCPE F LGME+ GIHET+YNSIMKCD+DI KDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 512 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEY 333
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 332 DESGPSIVHRKC 297
DESGPSIVHRKC
Sbjct: 364 DESGPSIVHRKC 375
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 255 bits (625), Expect = 2e-68
Identities = 118/132 (89%), Positives = 122/132 (92%)
Frame = -3
Query: 692 PXGQVITIGNERFRCPEXXFPTFVLGMEACGIHETTYNSIMKCDVDIXKDLYANTVLSGG 513
P GQVIT+GNERFRCPE F LGME+ GIHET+YNSIMKCD+DI KDLYANTVLSGG
Sbjct: 200 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 259
Query: 512 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEY 333
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEY
Sbjct: 260 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 319
Query: 332 DESGPSIVHRKC 297
DESGPSIVHRKC
Sbjct: 320 DESGPSIVHRKC 331
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 255 bits (625), Expect = 2e-68
Identities = 118/132 (89%), Positives = 122/132 (92%)
Frame = -3
Query: 692 PXGQVITIGNERFRCPEXXFPTFVLGMEACGIHETTYNSIMKCDVDIXKDLYANTVLSGG 513
P GQVIT+GNERFRCPE F LGME+ GIHET+YNSIMKCD+DI KDLYANTVLSGG
Sbjct: 230 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 289
Query: 512 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEY 333
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEY
Sbjct: 290 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 349
Query: 332 DESGPSIVHRKC 297
DESGPSIVHRKC
Sbjct: 350 DESGPSIVHRKC 361
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 255 bits (625), Expect = 2e-68
Identities = 118/132 (89%), Positives = 122/132 (92%)
Frame = -3
Query: 692 PXGQVITIGNERFRCPEXXFPTFVLGMEACGIHETTYNSIMKCDVDIXKDLYANTVLSGG 513
P GQVIT+GNERFRCPE F LGME+ GIHET+YNSIMKCD+DI KDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 512 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEY 333
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 332 DESGPSIVHRKC 297
DESGPSIVHRKC
Sbjct: 364 DESGPSIVHRKC 375
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 249 bits (610), Expect = 1e-66
Identities = 117/132 (88%), Positives = 121/132 (91%)
Frame = -3
Query: 692 PXGQVITIGNERFRCPEXXFPTFVLGMEACGIHETTYNSIMKCDVDIXKDLYANTVLSGG 513
P GQVIT+GNERFRCPE F LGME+ GIHET+YNSIMKCD+DI KDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 512 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEY 333
TTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 332 DESGPSIVHRKC 297
DESGPSIVHRKC
Sbjct: 363 DESGPSIVHRKC 374
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 246 bits (602), Expect = 1e-65
Identities = 115/132 (87%), Positives = 118/132 (89%)
Frame = -3
Query: 692 PXGQVITIGNERFRCPEXXFPTFVLGMEACGIHETTYNSIMKCDVDIXKDLYANTVLSGG 513
P GQVITIGNERFRCPE F +GME GIHETTY SIMKCDVDI KDLYANTVLSGG
Sbjct: 243 PDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGG 302
Query: 512 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEY 333
T+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEY
Sbjct: 303 TSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 332 DESGPSIVHRKC 297
DESGPSIVHRKC
Sbjct: 363 DESGPSIVHRKC 374
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 130 bits (313), Expect = 1e-30
Identities = 61/131 (46%), Positives = 84/131 (64%)
Frame = -3
Query: 692 PXGQVITIGNERFRCPEXXFPTFVLGMEACGIHETTYNSIMKCDVDIXKDLYANTVLSGG 513
P I I N FR PE F ++G E G+ SIMKCDVD+ + LY+N VLSGG
Sbjct: 242 PDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGG 301
Query: 512 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEY 333
TT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY
Sbjct: 302 TTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEY 361
Query: 332 DESGPSIVHRK 300
++ G S +H++
Sbjct: 362 EDMGASAMHKR 372
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 111 bits (266), Expect = 6e-25
Identities = 57/137 (41%), Positives = 80/137 (58%), Gaps = 13/137 (9%)
Frame = -3
Query: 692 PXGQVITIGNERFRCPEXXFPTFVLGMEACGIHETTYNSIMKCDVDIXKDLYANTVLSGG 513
P G+VI +G ERF PE F ++ +E G+ E + I D+D D Y + VLSGG
Sbjct: 247 PDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGG 306
Query: 512 TTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL-- 372
TTMYPG+ R++KE+ L A KI+I APP RK+ V++GG++LA+L
Sbjct: 307 TTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMK 366
Query: 371 XTFQQMWISKQEYDESG 321
Q W+SK+EY+E G
Sbjct: 367 DRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 109 bits (263), Expect = 1e-24
Identities = 57/140 (40%), Positives = 76/140 (54%), Gaps = 8/140 (5%)
Frame = -3
Query: 692 PXGQVITIGNERFRCPEXXFPTFVLGMEA-----CGIHETTYNSIMKCDVDIXKDLYANT 528
P G G ER + PE F L E + + S D+DI L++N
Sbjct: 296 PNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLFSNV 355
Query: 527 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLXTFQQ 357
++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL TFQQ
Sbjct: 356 TVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQ 415
Query: 356 MWISKQEYDESGPSIVHRKC 297
MW+SK EYDESG SIV +KC
Sbjct: 416 MWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 87.4 bits (207), Expect = 9e-18
Identities = 37/112 (33%), Positives = 68/112 (60%)
Frame = -3
Query: 671 IGNERFRCPEXXFPTFVLGMEACGIHETTYNSIMKCDVDIXKDLYANTVLSGGTTMYPGI 492
I N RF C E F G++ G+H+ + +I++C +D + LY N L+GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 491 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQE 336
A+++++E++ + P+T+ ++ P R + ++G I+AS TF+ IS Q+
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 81.4 bits (192), Expect = 6e-16
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 17/139 (12%)
Frame = -3
Query: 677 ITIGNERFRCPEXXF-PTFVLGMEACGIHETTYNSIMKCDVDIXKDLYANTVLSGGTTMY 501
+ +G ERF PE F P F I +T I +C +D+ + LY N VLSGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 500 PGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLX 369
A ++Q+++ L+ P + +++I+ ++Y+VW GGS+LAS
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 368 TFQQMWISKQEYDESGPSI 312
F Q+ +K EY E GPSI
Sbjct: 396 EFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 63.3 bits (147), Expect = 2e-10
Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Frame = -3
Query: 677 ITIGNERFRCPEXXFPTFVLGMEACGIHETTYNSIMKCDVDIXKDLYANTVLSGGTTMYP 498
I +G ERF PE F + ++ CG+ E SI +C + L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 497 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLXTFQQMWISKQEYDE 327
G +R+++E+ ++ P+ + + + P+ W G L L + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 326 SGPSI 312
G S+
Sbjct: 379 RGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 63.3 bits (147), Expect = 2e-10
Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Frame = -3
Query: 677 ITIGNERFRCPEXXFPTFVLGMEACGIHETTYNSIMKCDVDIXKDLYANTVLSGGTTMYP 498
I +G ERF PE F + ++ CG+ E SI +C + L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 497 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLXTFQQMWISKQEYDE 327
G +R+++E+ ++ P+ + + + P+ W G L L + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 326 SGPSI 312
G S+
Sbjct: 379 RGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 44.8 bits (101), Expect = 6e-05
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 10/91 (10%)
Frame = -3
Query: 575 IMKCDVDIXKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 411
+ KC +D+ K L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 410 ----YSVWIGGSILASL-XTFQQMWISKQEY 333
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.60
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 399 PYGVLPLWRSNDLNLHCRWGESCD 470
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.60
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 399 PYGVLPLWRSNDLNLHCRWGESCD 470
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.60
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 399 PYGVLPLWRSNDLNLHCRWGESCD 470
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 235 KPELSSRPRAAGGSDARCVXKHFLCTMEGPD 327
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 235 KPELSSRPRAAGGSDARCVXKHFLCTMEGPD 327
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 338 EYDESGPSIVHRKCX*THRASLPPAARGRLLNSG 237
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>AL110484-22|CAB54414.2| 305|Caenorhabditis elegans Hypothetical
protein Y38E10A.22 protein.
Length = 305
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +1
Query: 373 REARIDPPIHTEYF--LSGGAMILIFIVDGARAVISFCIRSAIPGYMVVPPDNTVLAYKS 546
++A D P+ T Y L A + I+ + IS +RS +P Y+ N + A +
Sbjct: 26 QQAIADSPLFTAYMKLLKRQAELSPRILSALLSAISSIVRSHLPAYLKFQAKNGLTATEK 85
Query: 547 LXMST 561
L ST
Sbjct: 86 LIQST 90
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,011,448
Number of Sequences: 27780
Number of extensions: 271010
Number of successful extensions: 620
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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