Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1175
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC112059-1|AAI12060.1|  383|Homo sapiens methenyltetrahydrofolat...    82   2e-15
BC112057-1|AAI12058.1|  383|Homo sapiens methenyltetrahydrofolat...    82   2e-15
AK023955-1|BAB14739.1|  382|Homo sapiens protein ( Homo sapiens ...    82   2e-15
AK023060-1|BAB14383.1|  371|Homo sapiens protein ( Homo sapiens ...    82   2e-15
BC071589-1|AAH71589.1| 1131|Homo sapiens ADNP homeobox 2 protein.      31   3.0  
AK022688-1|BAB14180.1|  651|Homo sapiens protein ( Homo sapiens ...    31   3.0  
AB020670-1|BAA74886.2| 1181|Homo sapiens KIAA0863 protein protein.     31   3.0  

>BC112059-1|AAI12060.1|  383|Homo sapiens methenyltetrahydrofolate
           synthetase domain containing protein.
          Length = 383

 Score = 82.2 bits (194), Expect = 2e-15
 Identities = 40/86 (46%), Positives = 54/86 (62%)
 Frame = -3

Query: 653 DLEFGLMMHMKAIKPDTVVVTTVHDCQVFDTLPAELFGPHDVPIDIIVTPTQVIETQRMS 474
           DLE+ +M+ M A+  +T VVT VHDCQV D +P EL   HD+ +D I+TPT+VI T    
Sbjct: 159 DLEYAMMVSMGAVSKETPVVTIVHDCQVVD-IPEELVEEHDITVDYILTPTRVIATGCKR 217

Query: 473 QRPTGILWHLXSNRRLQLMPILGQLR 396
            +P GI W   S   ++ +PIL  LR
Sbjct: 218 PKPMGITWFKISLEMMEKIPILRSLR 243


>BC112057-1|AAI12058.1|  383|Homo sapiens methenyltetrahydrofolate
           synthetase domain containing protein.
          Length = 383

 Score = 82.2 bits (194), Expect = 2e-15
 Identities = 40/86 (46%), Positives = 54/86 (62%)
 Frame = -3

Query: 653 DLEFGLMMHMKAIKPDTVVVTTVHDCQVFDTLPAELFGPHDVPIDIIVTPTQVIETQRMS 474
           DLE+ +M+ M A+  +T VVT VHDCQV D +P EL   HD+ +D I+TPT+VI T    
Sbjct: 159 DLEYAMMVSMGAVSKETPVVTIVHDCQVVD-IPEELVEEHDITVDYILTPTRVIATGCKR 217

Query: 473 QRPTGILWHLXSNRRLQLMPILGQLR 396
            +P GI W   S   ++ +PIL  LR
Sbjct: 218 PKPMGITWFKISLEMMEKIPILRSLR 243


>AK023955-1|BAB14739.1|  382|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13893 fis, clone THYRO1001661. ).
          Length = 382

 Score = 82.2 bits (194), Expect = 2e-15
 Identities = 40/86 (46%), Positives = 54/86 (62%)
 Frame = -3

Query: 653 DLEFGLMMHMKAIKPDTVVVTTVHDCQVFDTLPAELFGPHDVPIDIIVTPTQVIETQRMS 474
           DLE+ +M+ M A+  +T VVT VHDCQV D +P EL   HD+ +D I+TPT+VI T    
Sbjct: 158 DLEYAMMVSMGAVSKETPVVTIVHDCQVVD-IPEELVEEHDITVDYILTPTRVIATGCKR 216

Query: 473 QRPTGILWHLXSNRRLQLMPILGQLR 396
            +P GI W   S   ++ +PIL  LR
Sbjct: 217 PKPMGITWFKISLEMMEKIPILRSLR 242


>AK023060-1|BAB14383.1|  371|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12998 fis, clone NT2RP3000267. ).
          Length = 371

 Score = 82.2 bits (194), Expect = 2e-15
 Identities = 40/86 (46%), Positives = 54/86 (62%)
 Frame = -3

Query: 653 DLEFGLMMHMKAIKPDTVVVTTVHDCQVFDTLPAELFGPHDVPIDIIVTPTQVIETQRMS 474
           DLE+ +M+ M A+  +T VVT VHDCQV D +P EL   HD+ +D I+TPT+VI T    
Sbjct: 159 DLEYAMMVSMGAVSKETPVVTIVHDCQVVD-IPEELVEEHDITVDYILTPTRVIATGCKR 217

Query: 473 QRPTGILWHLXSNRRLQLMPILGQLR 396
            +P GI W   S   ++ +PIL  LR
Sbjct: 218 PKPMGITWFKISLEMMEKIPILRSLR 243


>BC071589-1|AAH71589.1| 1131|Homo sapiens ADNP homeobox 2 protein.
          Length = 1131

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +3

Query: 309  VPIIFIPRAYICKSILKE*TPISLQHFDISELSKYRHEL 425
            V   F  R YIC   +K   P  L  FD+SEL   +H L
Sbjct: 1087 VASFFGKRRYICMKAIKNHKPSVLLGFDMSELKNVKHRL 1125


>AK022688-1|BAB14180.1|  651|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12626 fis, clone NT2RM4001810, weakly similar to
           AGGRECAN CORE PROTEIN PRECURSOR. ).
          Length = 651

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +3

Query: 309 VPIIFIPRAYICKSILKE*TPISLQHFDISELSKYRHEL 425
           V   F  R YIC   +K   P  L  FD+SEL   +H L
Sbjct: 607 VASFFGKRRYICMKAIKNHKPSVLLGFDMSELKNVKHRL 645


>AB020670-1|BAA74886.2| 1181|Homo sapiens KIAA0863 protein protein.
          Length = 1181

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +3

Query: 309  VPIIFIPRAYICKSILKE*TPISLQHFDISELSKYRHEL 425
            V   F  R YIC   +K   P  L  FD+SEL   +H L
Sbjct: 1137 VASFFGKRRYICMKAIKNHKPSVLLGFDMSELKNVKHRL 1175


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,654,869
Number of Sequences: 237096
Number of extensions: 2080137
Number of successful extensions: 4287
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4283
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)