Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1175
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001814-1|AAN71569.1|  534|Drosophila melanogaster RH35990p pro...   100   2e-21
AY058608-1|AAL13837.1|  545|Drosophila melanogaster LD30155p pro...   100   2e-21
AE014297-81|AAF52130.1|  545|Drosophila melanogaster CG14648-PA,...   100   2e-21
AE014297-82|AAN13312.1|  338|Drosophila melanogaster CG14648-PB,...    71   2e-12

>BT001814-1|AAN71569.1|  534|Drosophila melanogaster RH35990p
           protein.
          Length = 534

 Score =  100 bits (239), Expect = 2e-21
 Identities = 47/104 (45%), Positives = 67/104 (64%)
 Frame = -3

Query: 653 DLEFGLMMHMKAIKPDTVVVTTVHDCQVFDTLPAELFGPHDVPIDIIVTPTQVIETQRMS 474
           DL+ GL++ + AI P T++VT VHD QV D+LP  LF  +D P+DII TPT++I   +  
Sbjct: 172 DLDIGLLIELGAITPKTIIVTIVHDMQVVDSLPPNLFQKYDTPVDIIATPTEIIRVPKRL 231

Query: 473 QRPTGILWHLXSNRRLQLMPILGQLRDIEML*ANWSLLLKNRFT 342
             P G+ W L S RRL+++P+L QL++ E   A  S+ LK   T
Sbjct: 232 SFPNGVYWELLSERRLKILPVLQQLKEREEK-AGKSISLKEEDT 274


>AY058608-1|AAL13837.1|  545|Drosophila melanogaster LD30155p
           protein.
          Length = 545

 Score =  100 bits (239), Expect = 2e-21
 Identities = 47/104 (45%), Positives = 67/104 (64%)
 Frame = -3

Query: 653 DLEFGLMMHMKAIKPDTVVVTTVHDCQVFDTLPAELFGPHDVPIDIIVTPTQVIETQRMS 474
           DL+ GL++ + AI P T++VT VHD QV D+LP  LF  +D P+DII TPT++I   +  
Sbjct: 183 DLDIGLLIELGAITPKTIIVTIVHDMQVVDSLPPNLFQKYDTPVDIIATPTEIIRVPKRL 242

Query: 473 QRPTGILWHLXSNRRLQLMPILGQLRDIEML*ANWSLLLKNRFT 342
             P G+ W L S RRL+++P+L QL++ E   A  S+ LK   T
Sbjct: 243 SFPNGVYWELLSERRLKILPVLQQLKEREEK-AGKSISLKEEDT 285


>AE014297-81|AAF52130.1|  545|Drosophila melanogaster CG14648-PA,
           isoform A protein.
          Length = 545

 Score =  100 bits (239), Expect = 2e-21
 Identities = 47/104 (45%), Positives = 67/104 (64%)
 Frame = -3

Query: 653 DLEFGLMMHMKAIKPDTVVVTTVHDCQVFDTLPAELFGPHDVPIDIIVTPTQVIETQRMS 474
           DL+ GL++ + AI P T++VT VHD QV D+LP  LF  +D P+DII TPT++I   +  
Sbjct: 183 DLDIGLLIELGAITPKTIIVTIVHDMQVVDSLPPNLFQKYDTPVDIIATPTEIIRVPKRL 242

Query: 473 QRPTGILWHLXSNRRLQLMPILGQLRDIEML*ANWSLLLKNRFT 342
             P G+ W L S RRL+++P+L QL++ E   A  S+ LK   T
Sbjct: 243 SFPNGVYWELLSERRLKILPVLQQLKEREEK-AGKSISLKEEDT 285


>AE014297-82|AAN13312.1|  338|Drosophila melanogaster CG14648-PB,
           isoform B protein.
          Length = 338

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 34/78 (43%), Positives = 48/78 (61%)
 Frame = -3

Query: 575 QVFDTLPAELFGPHDVPIDIIVTPTQVIETQRMSQRPTGILWHLXSNRRLQLMPILGQLR 396
           QV D+LP  LF  +D P+DII TPT++I   +    P G+ W L S RRL+++P+L QL+
Sbjct: 2   QVVDSLPPNLFQKYDTPVDIIATPTEIIRVPKRLSFPNGVYWELLSERRLKILPVLQQLK 61

Query: 395 DIEML*ANWSLLLKNRFT 342
           + E   A  S+ LK   T
Sbjct: 62  EREEK-AGKSISLKEEDT 78


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,840,874
Number of Sequences: 53049
Number of extensions: 631052
Number of successful extensions: 2124
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2122
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)