Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1173
         (650 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC113551-1|AAI13552.1|  816|Homo sapiens neuroligin 4, Y-linked ...    36   0.17 
BC113525-1|AAI13526.1|  816|Homo sapiens neuroligin 4, Y-linked ...    36   0.17 
BC051715-1|AAH51715.1|  828|Homo sapiens neuroligin 3 protein.         36   0.17 
BC034018-1|AAH34018.1|  816|Homo sapiens neuroligin 4, X-linked ...    36   0.17 
AY358562-1|AAQ88925.1|  816|Homo sapiens NLGN4 protein.                36   0.17 
AK074814-1|BAC11226.1|  335|Homo sapiens protein ( Homo sapiens ...    36   0.17 
AF376804-1|AAM46113.1|  816|Homo sapiens neuroligin Y protein.         36   0.17 
AF376803-1|AAM46112.1|  816|Homo sapiens neuroligin X protein.         36   0.17 
AF217413-2|AAF71232.1|  828|Homo sapiens neuroligin 3 isoform pr...    36   0.17 
AF217413-1|AAF71233.1|  848|Homo sapiens neuroligin 3 isoform pr...    36   0.17 
AF217411-1|AAF71230.1|  828|Homo sapiens neuroligin 3 isoform HN...    36   0.17 
AB040913-1|BAA96004.1|  682|Homo sapiens KIAA1480 protein protein.     36   0.17 
AB033086-1|BAA86574.1|  817|Homo sapiens KIAA1260 protein protein.     36   0.17 
AB023168-1|BAA76795.2|  679|Homo sapiens KIAA0951 protein protein.     36   0.17 
AF376802-1|AAM46111.1|  835|Homo sapiens neuroligin 2 protein.         35   0.29 
AB037787-1|BAA92604.1|  550|Homo sapiens KIAA1366 protein protein.     35   0.29 
BC032555-1|AAH32555.1|  823|Homo sapiens neuroligin 1 protein.         34   0.51 
AK074522-1|BAC11039.1|  509|Homo sapiens protein ( Homo sapiens ...    34   0.51 
AB028993-1|BAA83022.2|  826|Homo sapiens KIAA1070 protein protein.     34   0.51 

>BC113551-1|AAI13552.1|  816|Homo sapiens neuroligin 4, Y-linked
           protein.
          Length = 816

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 441 VRWPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYP 325
           V W +Y+P  Q YL +G +  VR +Y   +   W EL P
Sbjct: 557 VAWSKYNPKDQLYLHIGLKPRVRDHYRATKVAFWLELVP 595


>BC113525-1|AAI13526.1|  816|Homo sapiens neuroligin 4, Y-linked
           protein.
          Length = 816

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 441 VRWPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYP 325
           V W +Y+P  Q YL +G +  VR +Y   +   W EL P
Sbjct: 557 VAWSKYNPKDQLYLHIGLKPRVRDHYRATKVAFWLELVP 595


>BC051715-1|AAH51715.1|  828|Homo sapiens neuroligin 3 protein.
          Length = 828

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 441 VRWPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYPIQY 316
           V W +Y+P  Q YL +G +  VR +Y   +   W  L P  Y
Sbjct: 571 VAWSKYNPRDQLYLHIGLKPRVRDHYRATKVAFWKHLVPHLY 612


>BC034018-1|AAH34018.1|  816|Homo sapiens neuroligin 4, X-linked
           protein.
          Length = 816

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 441 VRWPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYP 325
           V W +Y+P  Q YL +G +  VR +Y   +   W EL P
Sbjct: 557 VAWSKYNPKDQLYLHIGLKPRVRDHYRATKVAFWLELVP 595


>AY358562-1|AAQ88925.1|  816|Homo sapiens NLGN4 protein.
          Length = 816

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 441 VRWPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYP 325
           V W +Y+P  Q YL +G +  VR +Y   +   W EL P
Sbjct: 557 VAWSKYNPKDQLYLHIGLKPRVRDHYRATKVAFWLELVP 595


>AK074814-1|BAC11226.1|  335|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90333 fis, clone NT2RP2002188, highly similar to
           Rattus norvegicus neuroligin 3 mRNA. ).
          Length = 335

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 441 VRWPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYPIQY 316
           V W +Y+P  Q YL +G +  VR +Y   +   W  L P  Y
Sbjct: 78  VAWSKYNPRDQLYLHIGLKPRVRDHYRATKVAFWKHLVPHLY 119


>AF376804-1|AAM46113.1|  816|Homo sapiens neuroligin Y protein.
          Length = 816

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 441 VRWPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYP 325
           V W +Y+P  Q YL +G +  VR +Y   +   W EL P
Sbjct: 557 VAWSKYNPKDQLYLHIGLKPRVRDHYRATKVAFWLELVP 595


>AF376803-1|AAM46112.1|  816|Homo sapiens neuroligin X protein.
          Length = 816

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 441 VRWPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYP 325
           V W +Y+P  Q YL +G +  VR +Y   +   W EL P
Sbjct: 557 VAWSKYNPKDQLYLHIGLKPRVRDHYRATKVAFWLELVP 595


>AF217413-2|AAF71232.1|  828|Homo sapiens neuroligin 3 isoform
           protein.
          Length = 828

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 441 VRWPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYPIQY 316
           V W +Y+P  Q YL +G +  VR +Y   +   W  L P  Y
Sbjct: 571 VAWSKYNPRDQLYLHIGLKPRVRDHYRATKVAFWKHLVPHLY 612


>AF217413-1|AAF71233.1|  848|Homo sapiens neuroligin 3 isoform
           protein.
          Length = 848

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 441 VRWPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYPIQY 316
           V W +Y+P  Q YL +G +  VR +Y   +   W  L P  Y
Sbjct: 591 VAWSKYNPRDQLYLHIGLKPRVRDHYRATKVAFWKHLVPHLY 632


>AF217411-1|AAF71230.1|  828|Homo sapiens neuroligin 3 isoform HNL3
           protein.
          Length = 828

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 441 VRWPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYPIQY 316
           V W +Y+P  Q YL +G +  VR +Y   +   W  L P  Y
Sbjct: 571 VAWSKYNPRDQLYLHIGLKPRVRDHYRATKVAFWKHLVPHLY 612


>AB040913-1|BAA96004.1|  682|Homo sapiens KIAA1480 protein protein.
          Length = 682

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 441 VRWPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYPIQY 316
           V W +Y+P  Q YL +G +  VR +Y   +   W  L P  Y
Sbjct: 425 VAWSKYNPRDQLYLHIGLKPRVRDHYRATKVAFWKHLVPHLY 466


>AB033086-1|BAA86574.1|  817|Homo sapiens KIAA1260 protein protein.
          Length = 817

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 441 VRWPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYP 325
           V W +Y+P  Q YL +G +  VR +Y   +   W EL P
Sbjct: 558 VAWSKYNPKDQLYLHIGLKPRVRDHYRATKVAFWLELVP 596


>AB023168-1|BAA76795.2|  679|Homo sapiens KIAA0951 protein protein.
          Length = 679

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 441 VRWPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYP 325
           V W +Y+P  Q YL +G +  VR +Y   +   W EL P
Sbjct: 420 VAWSKYNPKDQLYLHIGLKPRVRDHYRATKVAFWLELVP 458


>AF376802-1|AAM46111.1|  835|Homo sapiens neuroligin 2 protein.
          Length = 835

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -3

Query: 441 VRWPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYP 325
           V W +++  ++QYL +G +  VR NY  ++   W EL P
Sbjct: 568 VVWSKFNSKEKQYLHIGLKPRVRDNYRANKVAFWLELVP 606


>AB037787-1|BAA92604.1|  550|Homo sapiens KIAA1366 protein protein.
          Length = 550

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -3

Query: 441 VRWPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYP 325
           V W +++  ++QYL +G +  VR NY  ++   W EL P
Sbjct: 283 VVWSKFNSKEKQYLHIGLKPRVRDNYRANKVAFWLELVP 321


>BC032555-1|AAH32555.1|  823|Homo sapiens neuroligin 1 protein.
          Length = 823

 Score = 33.9 bits (74), Expect = 0.51
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -3

Query: 441 VRWPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYP 325
           V W  Y    Q YL +G +  V+++Y  ++  LW EL P
Sbjct: 573 VAWTRYSQKDQLYLHIGLKPRVKEHYRANKVNLWLELVP 611


>AK074522-1|BAC11039.1|  509|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90041 fis, clone HEMBA1002167, highly similar to
           Rattus norvegicus neuroligin I mRNA. ).
          Length = 509

 Score = 33.9 bits (74), Expect = 0.51
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -3

Query: 441 VRWPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYP 325
           V W  Y    Q YL +G +  V+++Y  ++  LW EL P
Sbjct: 259 VAWTRYSQKDQLYLHIGLKPRVKEHYRANKVNLWLELVP 297


>AB028993-1|BAA83022.2|  826|Homo sapiens KIAA1070 protein protein.
          Length = 826

 Score = 33.9 bits (74), Expect = 0.51
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -3

Query: 441 VRWPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYP 325
           V W  Y    Q YL +G +  V+++Y  ++  LW EL P
Sbjct: 576 VAWTRYSQKDQLYLHIGLKPRVKEHYRANKVNLWLELVP 614


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,012,363
Number of Sequences: 237096
Number of extensions: 1569160
Number of successful extensions: 3894
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3892
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)