Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1173
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145630-1|AAD38605.1|  550|Drosophila melanogaster BcDNA.GH0574...    42   7e-04
AE014297-1244|AAF54592.1|  550|Drosophila melanogaster CG4757-PA...    42   7e-04
AE014134-1663|AAF52792.1|  593|Drosophila melanogaster CG4382-PA...    41   0.001
AE014297-2769|AAF55745.3| 1314|Drosophila melanogaster CG34139-P...    36   0.048
BT010207-1|AAQ23525.1| 1248|Drosophila melanogaster RH63339p pro...    33   0.44 
AF251479-1|AAF68455.1| 1248|Drosophila melanogaster neuroligin p...    33   0.44 
AE014134-1184|AAF52450.2| 1248|Drosophila melanogaster CG13772-P...    33   0.44 
BT003545-1|AAO39549.1|  664|Drosophila melanogaster RE03380p pro...    31   1.0  
AY128457-1|AAM75050.1|  524|Drosophila melanogaster RE02195p pro...    31   1.0  
AE014297-3336|AAN13950.1|  524|Drosophila melanogaster CG10175-P...    31   1.0  
AE014297-3335|AAF56142.2|  644|Drosophila melanogaster CG10175-P...    31   1.0  
AE014297-3334|AAN13949.1|  659|Drosophila melanogaster CG10175-P...    31   1.0  
BT024213-1|ABC86275.1| 1354|Drosophila melanogaster RE29404p pro...    30   3.1  
BT011155-1|AAR82823.1|  745|Drosophila melanogaster AT29074p pro...    30   3.1  
AE014297-634|AAF53998.3| 1354|Drosophila melanogaster CG31146-PD...    30   3.1  
BT011427-1|AAR99085.1| 1253|Drosophila melanogaster SD06669p pro...    29   7.2  
BT001300-1|AAN71055.1| 1253|Drosophila melanogaster AT12326p pro...    29   7.2  

>AF145630-1|AAD38605.1|  550|Drosophila melanogaster BcDNA.GH05741
           protein.
          Length = 550

 Score = 41.9 bits (94), Expect = 7e-04
 Identities = 14/42 (33%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
 Frame = -3

Query: 444 GVRWPEYDPAKQQYLDVGDRLTVRK-NYAEDRFQLWDELYPI 322
           G+ WP Y+   + YL++G+ LT +   +  +R+Q+W++L+P+
Sbjct: 505 GLNWPLYNAQDKGYLEIGNNLTAKSGGFFLNRYQIWEDLFPL 546


>AE014297-1244|AAF54592.1|  550|Drosophila melanogaster CG4757-PA
           protein.
          Length = 550

 Score = 41.9 bits (94), Expect = 7e-04
 Identities = 14/42 (33%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
 Frame = -3

Query: 444 GVRWPEYDPAKQQYLDVGDRLTVRK-NYAEDRFQLWDELYPI 322
           G+ WP Y+   + YL++G+ LT +   +  +R+Q+W++L+P+
Sbjct: 505 GLNWPLYNAQDKGYLEIGNNLTAKSGGFFLNRYQIWEDLFPL 546


>AE014134-1663|AAF52792.1|  593|Drosophila melanogaster CG4382-PA
           protein.
          Length = 593

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 12/42 (28%), Positives = 26/42 (61%)
 Frame = -3

Query: 441 VRWPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYPIQY 316
           +RW  +   K+ YLD+G  +T+ +N   + +++W  L+P+ +
Sbjct: 545 IRWRPFSFKKRYYLDIGKHITLEENLNAENYEIWKRLFPLNW 586


>AE014297-2769|AAF55745.3| 1314|Drosophila melanogaster CG34139-PA
           protein.
          Length = 1314

 Score = 35.9 bits (79), Expect = 0.048
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -3

Query: 441 VRWPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYP 325
           + W  YDP  Q+YL++G +  ++ ++   +  +W  L P
Sbjct: 682 ITWENYDPLHQKYLEIGMKPRIKNHFRAHQLSIWLRLIP 720


>BT010207-1|AAQ23525.1| 1248|Drosophila melanogaster RH63339p
           protein.
          Length = 1248

 Score = 32.7 bits (71), Expect = 0.44
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -3

Query: 435 WPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYP 325
           W  YD   Q Y+++G++  ++ +Y   +  +W  L P
Sbjct: 787 WDAYDVVNQLYVELGNKANIQSHYRGHKLSMWLNLIP 823


>AF251479-1|AAF68455.1| 1248|Drosophila melanogaster neuroligin
           protein.
          Length = 1248

 Score = 32.7 bits (71), Expect = 0.44
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -3

Query: 435 WPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYP 325
           W  YD   Q Y+++G++  ++ +Y   +  +W  L P
Sbjct: 787 WDAYDVVNQLYVELGNKANIQSHYRGHKLSMWLNLIP 823


>AE014134-1184|AAF52450.2| 1248|Drosophila melanogaster CG13772-PA
           protein.
          Length = 1248

 Score = 32.7 bits (71), Expect = 0.44
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -3

Query: 435 WPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYP 325
           W  YD   Q Y+++G++  ++ +Y   +  +W  L P
Sbjct: 787 WDAYDVVNQLYVELGNKANIQSHYRGHKLSMWLNLIP 823


>BT003545-1|AAO39549.1|  664|Drosophila melanogaster RE03380p
           protein.
          Length = 664

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = -3

Query: 453 PEIGVRWPEYDPAKQQ----YLDVGDRLTVRKNYAEDRFQLWDELY 328
           P +  +W   DP        Y+D+   L ++ N   +R + WDE+Y
Sbjct: 611 PMLTTKWAPIDPTNVMNSLNYMDISANLAMKTNPEPERQRFWDEMY 656


>AY128457-1|AAM75050.1|  524|Drosophila melanogaster RE02195p
           protein.
          Length = 524

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = -3

Query: 453 PEIGVRWPEYDPAKQQ----YLDVGDRLTVRKNYAEDRFQLWDELY 328
           P +  +W   DP        Y+D+   L ++ N   +R + WDE+Y
Sbjct: 471 PMLTTKWAPIDPTNVMNSLNYMDISANLAMKTNPEPERQRFWDEMY 516


>AE014297-3336|AAN13950.1|  524|Drosophila melanogaster CG10175-PB,
           isoform B protein.
          Length = 524

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = -3

Query: 453 PEIGVRWPEYDPAKQQ----YLDVGDRLTVRKNYAEDRFQLWDELY 328
           P +  +W   DP        Y+D+   L ++ N   +R + WDE+Y
Sbjct: 471 PMLTTKWAPIDPTNVMNSLNYMDISANLAMKTNPEPERQRFWDEMY 516


>AE014297-3335|AAF56142.2|  644|Drosophila melanogaster CG10175-PA,
           isoform A protein.
          Length = 644

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = -3

Query: 453 PEIGVRWPEYDPAKQQ----YLDVGDRLTVRKNYAEDRFQLWDELY 328
           P +  +W   DP        Y+D+   L ++ N   +R + WDE+Y
Sbjct: 591 PMLTTKWAPIDPTNVMNSLNYMDISANLAMKTNPEPERQRFWDEMY 636


>AE014297-3334|AAN13949.1|  659|Drosophila melanogaster CG10175-PC,
           isoform C protein.
          Length = 659

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = -3

Query: 453 PEIGVRWPEYDPAKQQ----YLDVGDRLTVRKNYAEDRFQLWDELY 328
           P +  +W   DP        Y+D+   L ++ N   +R + WDE+Y
Sbjct: 606 PMLTTKWAPIDPTNVMNSLNYMDISANLAMKTNPEPERQRFWDEMY 651


>BT024213-1|ABC86275.1| 1354|Drosophila melanogaster RE29404p
           protein.
          Length = 1354

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 435 WPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYP 325
           WPE++   Q YL++G   TV   Y +     W++  P
Sbjct: 679 WPEFNRRAQAYLNIGIPPTVGYKYRQIYMNFWNKELP 715


>BT011155-1|AAR82823.1|  745|Drosophila melanogaster AT29074p
           protein.
          Length = 745

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 435 WPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYP 325
           WPE++   Q YL++G   TV   Y +     W++  P
Sbjct: 70  WPEFNRRAQAYLNIGIPPTVGYKYRQIYMNFWNKELP 106


>AE014297-634|AAF53998.3| 1354|Drosophila melanogaster CG31146-PD
           protein.
          Length = 1354

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 435 WPEYDPAKQQYLDVGDRLTVRKNYAEDRFQLWDELYP 325
           WPE++   Q YL++G   TV   Y +     W++  P
Sbjct: 679 WPEFNRRAQAYLNIGIPPTVGYKYRQIYMNFWNKELP 715


>BT011427-1|AAR99085.1| 1253|Drosophila melanogaster SD06669p
           protein.
          Length = 1253

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +3

Query: 384 VCLPRPGTAAWRGRTPATGPRSPGVSPAXVWI 479
           V LP P  AA     PAT P +P V+P  +W+
Sbjct: 212 VSLPIPKPAA----APATSPTTPSVNPIFLWV 239


>BT001300-1|AAN71055.1| 1253|Drosophila melanogaster AT12326p
           protein.
          Length = 1253

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +3

Query: 384 VCLPRPGTAAWRGRTPATGPRSPGVSPAXVWI 479
           V LP P  AA     PAT P +P V+P  +W+
Sbjct: 212 VSLPIPKPAA----APATSPTTPSVNPIFLWV 239


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,831,571
Number of Sequences: 53049
Number of extensions: 454565
Number of successful extensions: 1111
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)