Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1165
         (739 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    34   0.004
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    27   0.46 
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    24   4.3  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    24   4.3  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    23   7.4  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 34.3 bits (75), Expect = 0.004
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 659 CNTGYSVGFMCNATGQCECLPGVIGKK 739
           C+   S    CNA G+C+C PGV G+K
Sbjct: 399 CDPVGSRSLQCNAEGRCQCKPGVTGEK 425



 Score = 29.5 bits (63), Expect = 0.11
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +2

Query: 656  NCNTGYSVGFMCNA-TGQCECLPGVIGKK 739
            NC+   S    C+  +G C C PGV+GKK
Sbjct: 940  NCDPIGSYNASCDTYSGDCFCKPGVVGKK 968



 Score = 28.3 bits (60), Expect = 0.26
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 656  NCNTGYSVGFMCNATGQCECLPGVIGKK 739
            +C+   S G  CN  GQC C   V G++
Sbjct: 988  DCDPSGSKGSQCNQYGQCPCNDNVEGRR 1015



 Score = 23.8 bits (49), Expect = 5.6
 Identities = 9/18 (50%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
 Frame = +2

Query: 686 MCNA-TGQCECLPGVIGK 736
           +C+A  G C C P VIG+
Sbjct: 901 ICDAINGNCHCKPNVIGR 918


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 27.5 bits (58), Expect = 0.46
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +2

Query: 563 KIYYTDNVMVILYIYTKXRIEKNVKYSFSDXNCNTGYSVGFMCNATGQCECLPGVIGK 736
           K+   + V + + + T    EKN K       CN  ++  ++C   GQC+C  G IGK
Sbjct: 449 KLISNEAVELDIDLRTSCNCEKNKKPMELSELCN--FNGDYVC---GQCQCYVGWIGK 501


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 674 SVGFMCNATGQCECLPG 724
           S+ F  N +  C CLPG
Sbjct: 410 SIAFTANTSISCSCLPG 426


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 674 SVGFMCNATGQCECLPG 724
           S+ F  N +  C CLPG
Sbjct: 410 SIAFTANTSISCSCLPG 426


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +2

Query: 569 YYTDNVMVILYIYTKXRIEKNVKYSFSDXNCNTGYSVGFMCNATGQCECLPGVIGK 736
           +++D V  +L++Y    I  +  Y+FS    +T +S G M +  GQ   L  ++ K
Sbjct: 175 HHSDIVYGVLFLYQTIGIVMSATYNFS---TDTMFS-GLMLHINGQIVRLGSMVKK 226


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,605
Number of Sequences: 2352
Number of extensions: 10288
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)