Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1163
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119147-1|AAM51007.1| 1209|Drosophila melanogaster RE53611p pro...    30   3.9  
AL024484-6|CAA19668.1|  530|Drosophila melanogaster EG:96G10.7 p...    30   3.9  
AE014298-503|AAN09599.1| 1209|Drosophila melanogaster CG32498-PO...    30   3.9  
AE014298-502|AAF45858.3| 1209|Drosophila melanogaster CG32498-PB...    30   3.9  
AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    29   8.9  

>AY119147-1|AAM51007.1| 1209|Drosophila melanogaster RE53611p
           protein.
          Length = 1209

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -3

Query: 667 GGKCTSNGLKGTGGVCKLAVNQIGGCRVAAGDSEGCVK 554
           GG C++NGL  TGGV     +  GG    +G   G  K
Sbjct: 42  GGSCSANGLAATGGVGGGGGSGSGGGGCGSGSGSGSGK 79


>AL024484-6|CAA19668.1|  530|Drosophila melanogaster EG:96G10.7
           protein.
          Length = 530

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -3

Query: 667 GGKCTSNGLKGTGGVCKLAVNQIGGCRVAAGDSEGCVK 554
           GG C++NGL  TGGV     +  GG    +G   G  K
Sbjct: 49  GGSCSANGLAATGGVGGGGGSGSGGGGCGSGSGSGSGK 86


>AE014298-503|AAN09599.1| 1209|Drosophila melanogaster CG32498-PO,
           isoform O protein.
          Length = 1209

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -3

Query: 667 GGKCTSNGLKGTGGVCKLAVNQIGGCRVAAGDSEGCVK 554
           GG C++NGL  TGGV     +  GG    +G   G  K
Sbjct: 42  GGSCSANGLAATGGVGGGGGSGSGGGGCGSGSGSGSGK 79


>AE014298-502|AAF45858.3| 1209|Drosophila melanogaster CG32498-PB,
           isoform B protein.
          Length = 1209

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -3

Query: 667 GGKCTSNGLKGTGGVCKLAVNQIGGCRVAAGDSEGCVK 554
           GG C++NGL  TGGV     +  GG    +G   G  K
Sbjct: 42  GGSCSANGLAATGGVGGGGGSGSGGGGCGSGSGSGSGK 79


>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +3

Query: 558 TQPSESPAATLQPPI*FTASLQTPPVPLSPFDVHFPP 668
           T+P   P  T  PP+    + + PP P     V+ PP
Sbjct: 849 TRPPTKPPTTYLPPVTVVRTTRPPPPPTRRTTVYVPP 885


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,453,715
Number of Sequences: 53049
Number of extensions: 504376
Number of successful extensions: 1670
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1670
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)