Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1163
(750 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 5.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 5.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 5.3
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 5.3
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 5.3
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 5.3
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 5.3
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 5.3
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 7.1
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 7.1
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 7.1
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 22 7.1
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 21 9.3
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 21 9.3
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 98 NHLFKLHKQKNHQTIF*INI 157
N L K++K K H T+ +NI
Sbjct: 181 NVLTKINKIKEHDTVLVVNI 200
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 98 NHLFKLHKQKNHQTIF*INI 157
N L K++K K H T+ +NI
Sbjct: 181 NVLTKINKIKEHDTVLVVNI 200
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 98 NHLFKLHKQKNHQTIF*INI 157
N L K++K K H T+ +NI
Sbjct: 181 NVLTKINKIKEHDTVLVVNI 200
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 98 NHLFKLHKQKNHQTIF*INI 157
N L K++K K H T+ +NI
Sbjct: 170 NVLTKINKIKEHDTVLVVNI 189
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 98 NHLFKLHKQKNHQTIF*INI 157
N L K++K K H T+ +NI
Sbjct: 186 NVLTKINKIKEHDTVLVVNI 205
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 98 NHLFKLHKQKNHQTIF*INI 157
N L K++K K H T+ +NI
Sbjct: 181 NVLTKINKIKEHDTVLVVNI 200
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 98 NHLFKLHKQKNHQTIF*INI 157
N L K++K K H T+ +NI
Sbjct: 181 NVLTKINKIKEHDTVLVVNI 200
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 208 DYLCPSIDRRLLGKTNRKSK 267
DY P + RRL+ + R SK
Sbjct: 781 DYRIPEVMRRLMSEDKRLSK 800
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.8 bits (44), Expect = 7.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 165 YSNKKLLKNSYFLHRLSMSIHR*AFIRKNKP 257
Y K L YFL R+S + + A NKP
Sbjct: 262 YFLHKQLMTRYFLERMSNDLGKTAEFDWNKP 292
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.8 bits (44), Expect = 7.1
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 165 YSNKKLLKNSYFLHRLS 215
YS+K LL N Y+L RLS
Sbjct: 261 YSHKLLL-NRYYLERLS 276
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.8 bits (44), Expect = 7.1
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 165 YSNKKLLKNSYFLHRLS 215
YS+K LL N Y+L RLS
Sbjct: 261 YSHKLLL-NRYYLERLS 276
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.8 bits (44), Expect = 7.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 165 YSNKKLLKNSYFLHRLSMSIHR*AFIRKNKP 257
Y K L YFL R+S + + A NKP
Sbjct: 262 YFLHKQLMTRYFLERMSNDLGKTAEFDWNKP 292
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 459 LFNVLDSVKVNYYVF 415
L+ +DS K+NY +F
Sbjct: 508 LYGSIDSSKINYRIF 522
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.4 bits (43), Expect = 9.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 301 G*LFFFLNRYLVLIFGLFFLINAYL 227
G L FL RY GL FL+ A L
Sbjct: 67 GFLMTFLRRYGQSAVGLTFLLGAIL 91
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,426
Number of Sequences: 438
Number of extensions: 3858
Number of successful extensions: 34
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -