Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1162
(750 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 28 0.081
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 2.3
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 23 3.1
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 7.1
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 7.1
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 7.1
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 7.1
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 7.1
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 9.3
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 9.3
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 28.3 bits (60), Expect = 0.081
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 456 NRNAKKTVDKEAQIFCHNTNMAVKYDN-NNLQMLDK 352
N++ +K + +E FC N +KYD+ ++ LDK
Sbjct: 323 NQDVQKKLREEINTFCPKNNKELKYDDIKEMEYLDK 358
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.3
Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
Frame = -1
Query: 504 NWKSYVQYENDCKINKNRNAKKTVDKEAQIFC-------HNTNMAVKYDNNN 370
N + Y +Y K A++ +E +I HN N Y+NNN
Sbjct: 51 NEREYRKYRETSKERSRDRAERERSREPKIISSLSNNTIHNNNYKYNYNNNN 102
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 23.0 bits (47), Expect = 3.1
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 417 IFCHNTNMAVKYDNNNLQMLDKDSCQVFLPS 325
I C N+ +Y NN++++ KD + PS
Sbjct: 330 IGCWNSEHFFEYGGNNIEIIVKDPETLQFPS 360
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 7.1
Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 7/52 (13%)
Frame = -1
Query: 504 NWKSYVQYENDCKINKNRNAKKTVDKEAQIFC-------HNTNMAVKYDNNN 370
N + Y +Y K ++ +E +I HN N Y+NNN
Sbjct: 51 NEREYRKYRETSKERSRDRTERERSREPKIISSLSNNTIHNNNYKYNYNNNN 102
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.1
Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 7/52 (13%)
Frame = -1
Query: 504 NWKSYVQYENDCKINKNRNAKKTVDKEAQIFC-------HNTNMAVKYDNNN 370
N + Y +Y K ++ +E +I HN N Y+NNN
Sbjct: 52 NEREYRKYRETSKERSRDRTERERSREPKIISSLSNNTIHNNNYKYNYNNNN 103
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.1
Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 7/52 (13%)
Frame = -1
Query: 504 NWKSYVQYENDCKINKNRNAKKTVDKEAQIFC-------HNTNMAVKYDNNN 370
N + Y +Y K ++ +E +I HN N Y+NNN
Sbjct: 52 NEREYRKYRETSKERSRDRTERERSREPKIISSLSNNTIHNNNYKYNYNNNN 103
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.1
Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 7/52 (13%)
Frame = -1
Query: 504 NWKSYVQYENDCKINKNRNAKKTVDKEAQIFC-------HNTNMAVKYDNNN 370
N + Y +Y K ++ +E +I HN N Y+NNN
Sbjct: 52 NEREYRKYRETSKERSRDRTERERSREPKIISSLSNNTIHNNNYKYNYNNNN 103
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.1
Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 7/52 (13%)
Frame = -1
Query: 504 NWKSYVQYENDCKINKNRNAKKTVDKEAQIFC-------HNTNMAVKYDNNN 370
N + Y +Y K ++ +E +I HN N Y+NNN
Sbjct: 52 NEREYRKYRETSKERSRDRTERERSREPKIISSLSNNTIHNNNYKYNYNNNN 103
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.4 bits (43), Expect = 9.3
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -2
Query: 590 CGYRKYSLHY*ICFL*IFISNLHHHFLEITGNHTFNTKMTA 468
CG Y+L+ + F+ +SNL LE K TA
Sbjct: 25 CGRDTYALNQSLHFVRASLSNLDMSVLECADRSAPRVKKTA 65
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.4 bits (43), Expect = 9.3
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -2
Query: 590 CGYRKYSLHY*ICFL*IFISNLHHHFLEITGNHTFNTKMTA 468
CG Y+L+ + F+ +SNL LE K TA
Sbjct: 115 CGRDTYALNQSLHFVRASLSNLDMSVLECADRSAPRVKKTA 155
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,095
Number of Sequences: 438
Number of extensions: 4082
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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