Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1158
         (730 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0391 - 23740603-23740665,23740805-23740927,23741009-237411...    33   0.23 

>03_05_0391 -
           23740603-23740665,23740805-23740927,23741009-23741148,
           23741209-23741264,23742005-23742262,23743290-23743627
          Length = 325

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
 Frame = +1

Query: 127 RDILLVRRNE-I*NISHFYALYLNCDTFMRYNINMRKIRLKQINANIFLNVEFVNDFIRD 303
           +D+ L++ +E +    H +  Y+N     +  +++ ++ + QI+  +    +F+ND + D
Sbjct: 208 QDVTLLKNSEELTKKEHPFITYINKTEVNKVMVHIEEVEVNQISMKVLTQPQFLNDDVMD 267

Query: 304 LYEMMIL*K*SVLSQEDQSN*WVLQLKLPI*NENTDGDEVE 426
            Y   +  K   +  + ++    L+L L I   N +G  VE
Sbjct: 268 AYIQCLRYKEKEIRGDGKA---FLELALKIGLLNVEGAHVE 305


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,950,755
Number of Sequences: 37544
Number of extensions: 269792
Number of successful extensions: 513
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)