Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1152
         (790 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   3.2  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   3.2  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   3.2  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   3.2  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   7.5  

>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 119 LFIVCWFIYCDYTY 78
           LFI  WFI C +++
Sbjct: 7   LFIAAWFIACTHSF 20


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 119 LFIVCWFIYCDYTY 78
           LFI  WFI C +++
Sbjct: 7   LFIAAWFIACTHSF 20


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 119 LFIVCWFIYCDYTY 78
           LFI  WFI C +++
Sbjct: 7   LFIAAWFIACTHSF 20


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/17 (64%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
 Frame = -1

Query: 142 LGCSTATTYLL-FVGLS 95
           L CSTAT Y++  VGLS
Sbjct: 157 LACSTATVYVMSVVGLS 173


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/43 (23%), Positives = 23/43 (53%)
 Frame = -1

Query: 214 RINSNSVNRLVTFFCNFME*HILNLGCSTATTYLLFVGLSTVI 86
           R+N+++   L+     F E HI+++   +    +  +G +TV+
Sbjct: 17  RVNNSNYTELLPIDMRFNEGHIVSIVFYSVLMIISAIGNTTVL 59


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,117
Number of Sequences: 438
Number of extensions: 4060
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)