Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1151
(500 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical pr... 40 8e-04
X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein. 40 0.001
U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of l... 40 0.001
U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of l... 40 0.001
U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of l... 40 0.001
Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical pr... 39 0.002
AF039047-10|AAB94229.2| 400|Caenorhabditis elegans Hypothetical... 38 0.003
AL117202-18|CAB57896.3| 765|Caenorhabditis elegans Hypothetical... 36 0.022
U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical pr... 34 0.067
U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical pr... 34 0.067
Z77654-2|CAB01130.1| 308|Caenorhabditis elegans Hypothetical pr... 32 0.27
U72208-1|AAD00182.1| 308|Caenorhabditis elegans inhibitor of ap... 32 0.27
AF067217-1|AAY55828.1| 191|Caenorhabditis elegans Hypothetical ... 31 0.62
Z82266-6|CAB05176.1| 393|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 30 1.1
AL023844-10|CAA19530.3| 503|Caenorhabditis elegans Hypothetical... 29 1.9
AL023844-9|CAH04760.1| 512|Caenorhabditis elegans Hypothetical ... 29 1.9
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 28 3.3
U28734-4|AAR30209.1| 477|Caenorhabditis elegans K (potassium) v... 27 5.8
U28734-3|AAR25654.1| 495|Caenorhabditis elegans K (potassium) v... 27 5.8
U28734-2|AAB52604.3| 490|Caenorhabditis elegans K (potassium) v... 27 5.8
Z73911-8|CAL64005.1| 367|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z73911-7|CAA98142.2| 483|Caenorhabditis elegans Hypothetical pr... 27 7.6
>Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical
protein F16A11.1 protein.
Length = 673
Score = 40.3 bits (90), Expect = 8e-04
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 225 EKHLDDSKICKICYSEERNVCFVPCGHVVACAKCALSTDKCPMCXQDVXE 374
++H+ + C IC++ + +PC H C+ C D CP+C + + E
Sbjct: 556 KEHIPED-YCTICFAAPGSTTLLPCNHDGFCSDCCNMMDHCPLCRKPIEE 604
>X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein.
Length = 582
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Frame = +3
Query: 246 KICKICYSEERNVCFVPCGHVVACAKCALS-------TDKCPMCXQDV 368
++CKIC E+N+ PCGH++ CAKC + + CP C ++
Sbjct: 388 ELCKICDDNEKNIKIEPCGHLL-CAKCLANWQDSDGGGNTCPFCRYEI 434
>U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform a protein.
Length = 582
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Frame = +3
Query: 246 KICKICYSEERNVCFVPCGHVVACAKCALS-------TDKCPMCXQDV 368
++CKIC E+N+ PCGH++ CAKC + + CP C ++
Sbjct: 388 ELCKICDDNEKNIKIEPCGHLL-CAKCLANWQDSDGGGNTCPFCRYEI 434
>U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform b protein.
Length = 565
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Frame = +3
Query: 246 KICKICYSEERNVCFVPCGHVVACAKCALS-------TDKCPMCXQDV 368
++CKIC E+N+ PCGH++ CAKC + + CP C ++
Sbjct: 371 ELCKICDDNEKNIKIEPCGHLL-CAKCLANWQDSDGGGNTCPFCRYEI 417
>U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform c protein.
Length = 523
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Frame = +3
Query: 246 KICKICYSEERNVCFVPCGHVVACAKCALS-------TDKCPMCXQDV 368
++CKIC E+N+ PCGH++ CAKC + + CP C ++
Sbjct: 371 ELCKICDDNEKNIKIEPCGHLL-CAKCLANWQDSDGGGNTCPFCRYEI 417
>Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical
protein C11H1.3 protein.
Length = 529
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Frame = +3
Query: 237 DDSKI-CKICYSEERNVCFVPCGHVVACAKCALST----DKCPMC 356
DDS + C IC S+ R+ +PC H+ C+ CA S + CP+C
Sbjct: 263 DDSGLECIICLSDIRDTVILPCRHLCVCSNCADSLRYKHNNCPIC 307
>AF039047-10|AAB94229.2| 400|Caenorhabditis elegans Hypothetical
protein K11D12.9 protein.
Length = 400
Score = 38.3 bits (85), Expect = 0.003
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +3
Query: 252 CKICYSEERNVCFVPCGHVVACAKCALSTD--KCPMCXQDV 368
C IC + + ++ F+PC H++ C+ C ++D +CP C +
Sbjct: 352 CCICLATKPSIVFMPCRHLITCSGCYDASDFRECPTCRSTI 392
>AL117202-18|CAB57896.3| 765|Caenorhabditis elegans Hypothetical
protein Y47D3A.22 protein.
Length = 765
Score = 35.5 bits (78), Expect = 0.022
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 261 CYSEERNVCFVPCGHVVACAKCA--LSTDKCPMCXQDVXE 374
C + V PCGH VAC C ++ +CP+C Q + E
Sbjct: 611 CLNSVATVKLDPCGHRVACVDCTEKVAIRRCPVCRQFINE 650
>U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical
protein F10D7.5c protein.
Length = 437
Score = 33.9 bits (74), Expect = 0.067
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = +3
Query: 222 GEKHLDDSKICKICYSEERNVCFVPCGHVVACAKCA--LSTDK--CPMCXQDVXE 374
G + +++ C IC N CGH+ C +C L T K CP+C V +
Sbjct: 376 GAQEVNEGDECTICMDAPVNSVLYTCGHMCMCFECGRRLLTTKGTCPICRAPVQD 430
>U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical
protein F10D7.5a protein.
Length = 617
Score = 33.9 bits (74), Expect = 0.067
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = +3
Query: 222 GEKHLDDSKICKICYSEERNVCFVPCGHVVACAKCA--LSTDK--CPMCXQDVXE 374
G + +++ C IC N CGH+ C +C L T K CP+C V +
Sbjct: 556 GAQEVNEGDECTICMDAPVNSVLYTCGHMCMCFECGRRLLTTKGTCPICRAPVQD 610
>Z77654-2|CAB01130.1| 308|Caenorhabditis elegans Hypothetical
protein C50B8.2 protein.
Length = 308
Score = 31.9 bits (69), Expect = 0.27
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 9 KCFYCDGGLKDWESDDVPWEQHARWFDRCAYVQLVK 116
KC +C L ESDD PWE+H ++ C +++L K
Sbjct: 210 KCPFCLVELDFDESDD-PWEEHQKFSASCDFIKLGK 244
>U72208-1|AAD00182.1| 308|Caenorhabditis elegans inhibitor of
apoptosis homolog protein.
Length = 308
Score = 31.9 bits (69), Expect = 0.27
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 9 KCFYCDGGLKDWESDDVPWEQHARWFDRCAYVQLVK 116
KC +C L ESDD PWE+H ++ C +++L K
Sbjct: 210 KCPFCLVELDFDESDD-PWEEHQKFSASCDFIKLGK 244
>AF067217-1|AAY55828.1| 191|Caenorhabditis elegans Hypothetical
protein F56A6.5 protein.
Length = 191
Score = 30.7 bits (66), Expect = 0.62
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 6/44 (13%)
Frame = +3
Query: 252 CKICYSE----ERNVCFVPCGHVVACAKCALS--TDKCPMCXQD 365
C ICY E + C CGH + C +C L +CP C ++
Sbjct: 6 CSICYDEYDHDTQIPCIGTCGHTI-CDRCRLQLLNKRCPHCKRE 48
>Z82266-6|CAB05176.1| 393|Caenorhabditis elegans Hypothetical
protein F23B2.10 protein.
Length = 393
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +3
Query: 243 SKICKICYSEERNVCFVPCGHVVACAKC--ALSTDKCPMCXQ 362
SK KI +R +C CGH + C C S+D C +C Q
Sbjct: 10 SKCEKIYDDNKRKICSGKCGHSI-CESCFDRKSSDICSICNQ 50
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +3
Query: 237 DDSKICKICYSEERNVCFVPCGHVVA--CAKCALS-TDKCPMC 356
D+ C +C C + CGH C + L+ +KCP+C
Sbjct: 3 DEDFCCAVCLDFFVEPCIIECGHSYCRFCIESHLNINEKCPLC 45
>AL023844-10|CAA19530.3| 503|Caenorhabditis elegans Hypothetical
protein Y48A6B.6a protein.
Length = 503
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 164 RYRSGLRLHLLNVVTSFHQLHVRAAVEPSGVLFPRNVIAF 45
RY SGL++ + SF QL + A V +GV+F ++ F
Sbjct: 365 RYSSGLQMFGKTLKASFRQLGMMAMVVMTGVIFFSTLVYF 404
>AL023844-9|CAH04760.1| 512|Caenorhabditis elegans Hypothetical
protein Y48A6B.6b protein.
Length = 512
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 164 RYRSGLRLHLLNVVTSFHQLHVRAAVEPSGVLFPRNVIAF 45
RY SGL++ + SF QL + A V +GV+F ++ F
Sbjct: 401 RYSSGLQMFGKTLKASFRQLGMMAMVVMTGVIFFSTLVYF 440
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 219 EGEKHLDDSKICKICYSEERNVCFVPCGHVV--ACAKCALSTDK-CPMCXQDV 368
+GE+ D +C + + ++ + C HV C L +K CPMC +++
Sbjct: 425 DGEEDEDTCTVCLSSFEDGESIQKLRCNHVFHPECIYKWLDINKRCPMCREEI 477
>U28734-4|AAR30209.1| 477|Caenorhabditis elegans K (potassium)
voltage-gated sensorychannel subunit protein 1, isoform
c protein.
Length = 477
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -1
Query: 224 ALLSDVLSRIIGXGLFFFASRYRSGLRLHLLNVVTSFHQLHVRAAVEPSGVLFPRNVIAF 45
ALL + R++ RY SG+R L + +S QL + V +GV+F ++ F
Sbjct: 342 ALLVVRVLRVLRVVRILKLGRYSSGMRTFALTLKSSARQLGMMGMVLSTGVVFFSTLLYF 401
>U28734-3|AAR25654.1| 495|Caenorhabditis elegans K (potassium)
voltage-gated sensorychannel subunit protein 1, isoform
b protein.
Length = 495
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -1
Query: 224 ALLSDVLSRIIGXGLFFFASRYRSGLRLHLLNVVTSFHQLHVRAAVEPSGVLFPRNVIAF 45
ALL + R++ RY SG+R L + +S QL + V +GV+F ++ F
Sbjct: 347 ALLVVRVLRVLRVVRILKLGRYSSGMRTFALTLKSSARQLGMMGMVLSTGVVFFSTLLYF 406
>U28734-2|AAB52604.3| 490|Caenorhabditis elegans K (potassium)
voltage-gated sensorychannel subunit protein 1, isoform
a protein.
Length = 490
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -1
Query: 224 ALLSDVLSRIIGXGLFFFASRYRSGLRLHLLNVVTSFHQLHVRAAVEPSGVLFPRNVIAF 45
ALL + R++ RY SG+R L + +S QL + V +GV+F ++ F
Sbjct: 342 ALLVVRVLRVLRVVRILKLGRYSSGMRTFALTLKSSARQLGMMGMVLSTGVVFFSTLLYF 401
>Z73911-8|CAL64005.1| 367|Caenorhabditis elegans Hypothetical
protein T12A7.2b protein.
Length = 367
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 192 NDSTKNVAQEGEKHLDDSKICKICYSEERNVCFVPCGH 305
ND+ A +G+ +D +I K S E N+ F PC H
Sbjct: 44 NDAHTEYAMKGQAQVDWQEIYKNHASIEDNLGFDPCRH 81
>Z73911-7|CAA98142.2| 483|Caenorhabditis elegans Hypothetical
protein T12A7.2a protein.
Length = 483
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 192 NDSTKNVAQEGEKHLDDSKICKICYSEERNVCFVPCGH 305
ND+ A +G+ +D +I K S E N+ F PC H
Sbjct: 44 NDAHTEYAMKGQAQVDWQEIYKNHASIEDNLGFDPCRH 81
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,758,517
Number of Sequences: 27780
Number of extensions: 204452
Number of successful extensions: 577
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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