Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1141
(610 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC577.12 |mug71||endoribonuclease |Schizosaccharomyces pombe|c... 30 0.30
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 1.2
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 28 1.2
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 27 1.6
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.1
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 27 2.1
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 27 2.1
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.8
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 27 2.8
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 27 2.8
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 26 3.7
SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|ch... 26 5.0
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 26 5.0
SPBC31F10.16 |||ChAPs family protein|Schizosaccharomyces pombe|c... 25 6.5
SPAC24H6.03 |cul3|pcu3|cullin 3|Schizosaccharomyces pombe|chr 1|... 25 6.5
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 25 6.5
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 25 6.5
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 25 6.5
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 25 6.5
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 6.5
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 8.7
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 25 8.7
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 25 8.7
>SPBC577.12 |mug71||endoribonuclease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 606
Score = 29.9 bits (64), Expect = 0.30
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 456 NIPAIRTGYESFDKYEDQIISIINDLKNTYGFNNIEASKQIVVRSS 593
N+ A + Y +F + I+ +N+L TYG++N V+ SS
Sbjct: 312 NVVATKGSYNTFQGEAESAINNLNELLGTYGYSNKNVYFVTVILSS 357
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.9 bits (59), Expect = 1.2
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 364 TPPNIHIRSCMTLTSN*KTPTYTSTTRNATITSPPSGLGMNPSTNTRTKSSVSSMT*RTH 543
TPP S +S+ T TS T + +I PP+G P T T +S S+ T+
Sbjct: 369 TPPPPASTSSTGTSSSPLLSTSTSCTTSTSI--PPTGNSTTPVTPTVPPTSSSTPLTTTN 426
Query: 544 MDSTTSKP 567
++TS P
Sbjct: 427 CTTSTSVP 434
Score = 27.5 bits (58), Expect = 1.6
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 403 TSN*KTPTYTSTTRNATITS-PPSGLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASKS 579
T +P T++T T TS PP+G P T T +S SS + ST+S S S
Sbjct: 271 TDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSS 330
Score = 27.5 bits (58), Expect = 1.6
Identities = 24/72 (33%), Positives = 32/72 (44%)
Frame = +1
Query: 364 TPPNIHIRSCMTLTSN*KTPTYTSTTRNATITSPPSGLGMNPSTNTRTKSSVSSMT*RTH 543
TPP S +S+ T TS T + +I PP+G P T T +S SS +
Sbjct: 315 TPPPPASTSSTGTSSSPLPSTSTSCTTSTSI--PPTGNSTTPVTPTVPPTSTSSTSTPPP 372
Query: 544 MDSTTSKPASKS 579
ST+S S S
Sbjct: 373 PASTSSTGTSSS 384
Score = 25.8 bits (54), Expect = 5.0
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +1
Query: 364 TPPNIHIRSCMTLTSN*KTPTYT-STTRNATITSPPSGLGMNPSTNTRTKSSVS-SMT*R 537
+P I SC T TS TP T ST+ ++ ++ S PST+T +S S T
Sbjct: 68 SPVEITSTSCTTDTSA-STPIITESTSSTSSASTTGSSSSPLPSTSTSCTTSTSIPPTGG 126
Query: 538 THMDST----TSKPASKSLFDLPVXP 603
+ ST T P S S +P+ P
Sbjct: 127 SSSLSTPITPTVPPTSTSSTSIPIPP 152
Score = 25.0 bits (52), Expect = 8.7
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +1
Query: 418 TPTYTSTTRNATITSPPSGLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASKSLFDLPV 597
TPT T+ ++T T PP +++T T SS T + ST+ P S PV
Sbjct: 302 TPTVPPTSTSSTSTPPPPA----STSSTGTSSSPLPSTSTSCTTSTSIPPTGNS--TTPV 355
Query: 598 XP 603
P
Sbjct: 356 TP 357
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.9 bits (59), Expect = 1.2
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 421 PTYTSTTRNATITSPPSGLGMNPSTNTRTK-SSVSSMT*RTH-MDSTTSKPASKS 579
PT +STT +++ TS + G+N ++ T S SS+T + DS TS A S
Sbjct: 819 PTVSSTTSSSSTTSLAANKGVNSNSITSLNLESTSSVTSTAYTTDSVTSTTALTS 873
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 5 HVAFQXRRVFTPSPAQXAAKDLHEACDLG 91
HV R +FTP+ Q ++ +LHEA G
Sbjct: 230 HVQGPPRDIFTPADNQPSSAELHEAQKFG 258
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/59 (25%), Positives = 34/59 (57%)
Frame = +1
Query: 418 TPTYTSTTRNATITSPPSGLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASKSLFDLP 594
+PT +S+T +++ +SP S + ++++++ SS SS + S+++ +S S P
Sbjct: 335 SPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRP 393
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/50 (26%), Positives = 29/50 (58%)
Frame = +1
Query: 433 STTRNATITSPPSGLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASKSL 582
S++ ++T+TS PST++ + S+ SS++ + + +S +S S+
Sbjct: 223 SSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSI 272
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 27.1 bits (57), Expect = 2.1
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
Frame = +1
Query: 88 GTRNGSSGPNR------PSPCRTXRTYASSVLMQISRGTSEIAMNSKFPTN 222
G +NG+S PN P P + T SS ++S +A N K P+N
Sbjct: 51 GCKNGTSEPNVFKARPIPPPRQVSSTIGSSTGRKVSGSIQRLASNFKNPSN 101
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 27.1 bits (57), Expect = 2.1
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
Frame = +3
Query: 258 SNAKTYKDIVVPLVSHLIDSLKSKHITDVKVFLVGHTSKYPYPILYDTDLK--LKNAHVH 431
S AK+ + P +SH +DS KS +D+ + HT+ Y L T KN
Sbjct: 201 SRAKSTESTSSPELSHSLDSSKS-IASDMPIHRASHTTGYAAASLTSTSFTPVTKNERAI 259
Query: 432 FDDKERYNNIPAIR-TGYESFDKYEDQI-ISIINDLKNTYGFNNIEASKQIVVRSS 593
+++ N I+ GY +I I + D +N ++ +KQ R++
Sbjct: 260 IAEEDYMLNHTRIKHKGYARIVTNHGEINIELHTDYAPHAVYNFVQLAKQGYYRNT 315
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 415 KTPTYTSTTRNATITSPPSGLGMNPSTNTRTKSS 516
KTP +T + T+TSP SG +PS + + S
Sbjct: 572 KTPEKGTTVVSRTVTSPKSGAYASPSKASYNQDS 605
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 26.6 bits (56), Expect = 2.8
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Frame = +1
Query: 397 TLTSN*KTPTYTSTTRNATIT-SPPSGLGMNPST---NTRTKSSVSSMT*RTHMDSTTSK 564
TLT T TY S T TIT SP + + +T ++ KSS+ T ++ TS
Sbjct: 420 TLTETILTTTYDSHTFLTTITPSPSNSISYTNNTFIPSSSIKSSIVYSVTPTSAENYTSS 479
Query: 565 PASKSLFDLPVXP 603
A + L V P
Sbjct: 480 EAFSTSSSLVVIP 492
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 26.6 bits (56), Expect = 2.8
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +1
Query: 421 PTYTSTTRNATITSPPSGLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASKSL 582
PT S T +++ S S+ TR+ S+VSS + + + +SKP+S ++
Sbjct: 540 PTRRSRTPIRSLSGRSSVASSRNSSRTRSYSNVSSASSNSLISIISSKPSSSTV 593
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.2 bits (55), Expect = 3.7
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +1
Query: 388 SCMTLTSN*KTPTYTSTTRNATITSPPSGLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKP 567
S T N TP+ T+ NA +TS + ++ T T +++ +ST SKP
Sbjct: 259 SASTSPRNTPTPSNNGTSINANVTSSLTSNSTGKTSKT-TDLLIAASKKSLPSNSTPSKP 317
Query: 568 ASKSLFDLP 594
+ S F+ P
Sbjct: 318 -NTSFFETP 325
>SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 463
Score = 25.8 bits (54), Expect = 5.0
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 424 TYTSTT---RNATITSPPSGLGMNPSTNTRTKSSVSSMT 531
TY STT N+T T PP+ ST T T+++ + T
Sbjct: 175 TYNSTTSSYHNSTSTPPPTITSTKASTVTSTEATTVTTT 213
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 25.8 bits (54), Expect = 5.0
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 403 TSN*KTPTYTSTTRNATITSP-PSGL--GMNPSTNTRTKSSVSSMT 531
T+N T T T+TT T T+P P+ N ST+ T++ S+ T
Sbjct: 145 TANRTTSTPTTTTARTTRTTPRPTATTNTSNQSTSNSTRNGTSAAT 190
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 397 TLTSN*KTPTYTSTTRNATITSPPSGLGMNPSTNTRTKSS 516
T T+N + +++TRN T + +G G T +SS
Sbjct: 168 TATTNTSNQSTSNSTRNGTSAATSNGTGTGAGTGASHRSS 207
>SPBC31F10.16 |||ChAPs family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 679
Score = 25.4 bits (53), Expect = 6.5
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +3
Query: 300 SHLIDSLKSKHITDVKVFLVGHTSKYPYPILYDTDLKLKNAHVHFDDKERYNNIP 464
++ ID KHI D +++ + S+ +LY D + F R+N IP
Sbjct: 155 TYAIDENGQKHIVDARMWTEAYMSEVLRSLLYSDD-----TNSRFAGHRRFNPIP 204
>SPAC24H6.03 |cul3|pcu3|cullin 3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 785
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 219 KQADIILSVETTESNAKTYKDIVVPLVSHLIDSLKSKHITDV 344
K+A+ E S + I PL+S + D L SKH+ D+
Sbjct: 258 KKAEKRFEEEKERSKNYLFTKIASPLLSVVEDELLSKHLDDL 299
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 557 VVESICVLQVIDDTDDLVLVFVEGFIPSPDGG 462
++E +C +V+ D +L E IPS DGG
Sbjct: 50 LLEYLCKPEVLSQLIDYILEVDETEIPSADGG 81
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 25.4 bits (53), Expect = 6.5
Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +1
Query: 373 NIHIRSCMTLTSN*KTPTYTSTTRNATITSPPSG---LGMNPSTNTRTKSSVSSMT*RTH 543
++++ L + + + +STT +++ +SP S +PS+++ + SS SS + +
Sbjct: 114 SVYLTGNGVLQTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSS 173
Query: 544 MDSTTSKPASKS 579
S++S +S S
Sbjct: 174 SSSSSSSSSSSS 185
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.4 bits (53), Expect = 6.5
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +1
Query: 418 TPTYTSTTRNATITSPPSGLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASKS 579
TP YT A + S S P T+ + S + T +S++S PAS +
Sbjct: 113 TPLYTMDNVTAPVWSNTSVPVSTPETSATSSSEFFTSYPATSSESSSSYPASST 166
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 25.4 bits (53), Expect = 6.5
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +1
Query: 388 SCMTLTSN*KTPTYTSTTRNATITSPPSGLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKP 567
S T +S+ TP STT +++ +S S + S+++ +KSS S + RT TTS
Sbjct: 130 SSTTSSSSSATP---STTSSSSSSSSSSSSSSSKSSSSSSKSSSRSSS-RTTSHRTTSHK 185
Query: 568 AS 573
+S
Sbjct: 186 SS 187
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 429 HFDDKERYNNIPAIRTGYESFDKYEDQIISIINDLKNTYG 548
+FD + Y+ IP+ TG SF + D I TYG
Sbjct: 962 NFDFRRPYSVIPSRMTGRSSFTQLSDDSDETIILASATYG 1001
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 25.0 bits (52), Expect = 8.7
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 418 TPTYTSTTRNATITSPPSGLGMNPSTNTRTKSSVSSMT*RT--HMDS 552
TP T + NA + PPS G N +TN+ + S + ++ H+D+
Sbjct: 82 TPKTTPVSLNAGV--PPSNTGANITTNSNNNAQTISSSSQSVGHIDN 126
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 584 NNDLLAGFDVVESICVLQVIDD 519
N D + D+++SI VLQ IDD
Sbjct: 858 NQDEIIAADLMKSITVLQFIDD 879
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 25.0 bits (52), Expect = 8.7
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 430 TSTTRNATITSPPSGLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASKS 579
T T+ + ITS S + S+++ + SS SS + + S++S +SKS
Sbjct: 139 TRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKS 188
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,604,547
Number of Sequences: 5004
Number of extensions: 57017
Number of successful extensions: 204
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 268287866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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