Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1140
(824 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D13636-1|BAA02800.1| 911|Homo sapiens KIAA0011 protein. 36 0.24
BT009799-1|AAP88801.1| 911|Homo sapiens general transcription f... 36 0.24
BC020981-1|AAH20981.1| 911|Homo sapiens general transcription f... 36 0.24
BC000212-1|AAH00212.1| 585|Homo sapiens GTF3C2 protein protein. 36 0.24
AC109828-1|AAY24049.1| 534|Homo sapiens unknown protein. 36 0.24
AY871801-1|AAX62803.1| 483|Homo sapiens cytochrome P450 family ... 33 1.3
AK128142-1|BAC87295.1| 209|Homo sapiens protein ( Homo sapiens ... 31 3.8
>D13636-1|BAA02800.1| 911|Homo sapiens KIAA0011 protein.
Length = 911
Score = 35.5 bits (78), Expect = 0.24
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +3
Query: 474 ELLEMIPTSRFYHRTARHRSRVHPYYLEPLRSPTVRFQRSFLPRTIRLW--NELPS-TVF 644
E E IP + +H + + PY + +SP QR LP L+ N S T
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383
Query: 645 PERYDMSFFKRG-LW 686
PER+D+SFF G LW
Sbjct: 384 PERWDVSFFTGGPLW 398
>BT009799-1|AAP88801.1| 911|Homo sapiens general transcription
factor IIIC, polypeptide 2, beta 110kDa protein.
Length = 911
Score = 35.5 bits (78), Expect = 0.24
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +3
Query: 474 ELLEMIPTSRFYHRTARHRSRVHPYYLEPLRSPTVRFQRSFLPRTIRLW--NELPS-TVF 644
E E IP + +H + + PY + +SP QR LP L+ N S T
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383
Query: 645 PERYDMSFFKRG-LW 686
PER+D+SFF G LW
Sbjct: 384 PERWDVSFFTGGPLW 398
>BC020981-1|AAH20981.1| 911|Homo sapiens general transcription
factor IIIC, polypeptide 2, beta 110kDa protein.
Length = 911
Score = 35.5 bits (78), Expect = 0.24
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +3
Query: 474 ELLEMIPTSRFYHRTARHRSRVHPYYLEPLRSPTVRFQRSFLPRTIRLW--NELPS-TVF 644
E E IP + +H + + PY + +SP QR LP L+ N S T
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383
Query: 645 PERYDMSFFKRG-LW 686
PER+D+SFF G LW
Sbjct: 384 PERWDVSFFTGGPLW 398
>BC000212-1|AAH00212.1| 585|Homo sapiens GTF3C2 protein protein.
Length = 585
Score = 35.5 bits (78), Expect = 0.24
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +3
Query: 474 ELLEMIPTSRFYHRTARHRSRVHPYYLEPLRSPTVRFQRSFLPRTIRLW--NELPS-TVF 644
E E IP + +H + + PY + +SP QR LP L+ N S T
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383
Query: 645 PERYDMSFFKRG-LW 686
PER+D+SFF G LW
Sbjct: 384 PERWDVSFFTGGPLW 398
>AC109828-1|AAY24049.1| 534|Homo sapiens unknown protein.
Length = 534
Score = 35.5 bits (78), Expect = 0.24
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +3
Query: 474 ELLEMIPTSRFYHRTARHRSRVHPYYLEPLRSPTVRFQRSFLPRTIRLW--NELPS-TVF 644
E E IP + +H + + PY + +SP QR LP L+ N S T
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383
Query: 645 PERYDMSFFKRG-LW 686
PER+D+SFF G LW
Sbjct: 384 PERWDVSFFTGGPLW 398
>AY871801-1|AAX62803.1| 483|Homo sapiens cytochrome P450 family 1
subfamily A polypeptide 1 protein.
Length = 483
Score = 33.1 bits (72), Expect = 1.3
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +3
Query: 429 SLCILYRMFHGECSEELLEMIPTSRFYHRTARHRSRVHPYYLEPLRSPTVRFQRSFLPRT 608
S ++Y + + ++ E + T R R R HP Y+E T R SF+P T
Sbjct: 327 SWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHPPYMEAFILETFR-HSSFVPFT 385
Query: 609 I---RLWNELPSTVFPERY 656
I +LW PS PER+
Sbjct: 386 IPHKKLWVN-PSEFLPERF 403
>AK128142-1|BAC87295.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ46263 fis, clone TESTI4025908. ).
Length = 209
Score = 31.5 bits (68), Expect = 3.8
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +1
Query: 442 CTACSMASALRNCSR*YQRLVFTIAPPATGVEFIHTTWSHCG-HPQCVSRDLFCHVPSGY 618
CT C+ L N QR + PP E +T H H CV + P G
Sbjct: 133 CTVCTQRKCLLN-----QRAHISSPPPCVRRESASSTREHTYLHLHCVYAEKVPPQPEGT 187
Query: 619 GMSSPPRC 642
+SSPP C
Sbjct: 188 QISSPPPC 195
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,759,225
Number of Sequences: 237096
Number of extensions: 2898320
Number of successful extensions: 5673
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5673
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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