Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1138
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 453 e-128
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 453 e-128
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 453 e-128
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 451 e-127
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 421 e-118
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 421 e-118
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 419 e-118
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 417 e-117
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 416 e-116
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 416 e-116
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 416 e-116
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 395 e-110
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 390 e-109
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 388 e-108
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 366 e-101
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 345 2e-95
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 221 6e-58
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 218 3e-57
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 217 6e-57
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 217 6e-57
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 217 8e-57
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 216 1e-56
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 186 2e-47
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 186 2e-47
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 121 7e-28
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 121 7e-28
Z81523-11|CAB04247.2| 403|Caenorhabditis elegans Hypothetical p... 31 1.3
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 30 1.7
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 30 1.7
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 30 1.7
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 6.8
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 6.8
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 6.8
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 6.8
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 6.8
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 6.8
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 6.8
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 6.8
Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z49913-1|CAA90142.1| 340|Caenorhabditis elegans Hypothetical pr... 28 8.9
AL021387-2|CAA16168.1| 463|Caenorhabditis elegans Hypothetical ... 28 8.9
AF273769-1|AAG15118.1| 463|Caenorhabditis elegans nuclear recep... 28 8.9
AF083222-1|AAD03680.1| 463|Caenorhabditis elegans nuclear recep... 28 8.9
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 453 bits (1116), Expect = e-128
Identities = 208/239 (87%), Positives = 221/239 (92%)
Frame = +2
Query: 83 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 262
MRE IS+HIGQAGVQIGNACWELYCLEHGIQPDGQMPSDK+LGG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 442
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+D+ LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 443 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 622
RIR+LAD CTGLQGFLVFH LLMERLSVDYGKK+KLEFSIYPAPQVSTA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 623 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSIT
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSIT 239
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 453 bits (1116), Expect = e-128
Identities = 208/239 (87%), Positives = 221/239 (92%)
Frame = +2
Query: 83 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 262
MRE IS+HIGQAGVQIGNACWELYCLEHGIQPDGQMPSDK+LGG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 442
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+D+ LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 443 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 622
RIR+LAD CTGLQGFLVFH LLMERLSVDYGKK+KLEFSIYPAPQVSTA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 623 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSIT
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSIT 239
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 453 bits (1116), Expect = e-128
Identities = 208/239 (87%), Positives = 221/239 (92%)
Frame = +2
Query: 83 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 262
MRE IS+HIGQAGVQIGNACWELYCLEHGIQPDGQMPSDK+LGG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 442
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+D+ LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 443 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 622
RIR+LAD CTGLQGFLVFH LLMERLSVDYGKK+KLEFSIYPAPQVSTA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 623 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSIT
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSIT 239
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 451 bits (1111), Expect = e-127
Identities = 207/238 (86%), Positives = 220/238 (92%)
Frame = +2
Query: 86 RECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGKH 265
RE IS+HIGQAGVQIGNACWELYCLEHGIQPDGQMPSDK+LGG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 266 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDR 445
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+D+ LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 446 IRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTAV 625
IR+LAD CTGLQGFLVFH LLMERLSVDYGKK+KLEFSIYPAPQVSTAV
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAV 180
Query: 626 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
VEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSIT
Sbjct: 181 VEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSIT 238
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 421 bits (1038), Expect = e-118
Identities = 191/239 (79%), Positives = 214/239 (89%)
Frame = +2
Query: 83 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 262
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDG MP+ T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 442
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 443 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 622
RIR+LAD C+GLQGF VFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 623 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD+ERP+YTNLNR+I Q+VSSIT
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQVVSSIT 237
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 421 bits (1038), Expect = e-118
Identities = 191/239 (79%), Positives = 214/239 (89%)
Frame = +2
Query: 83 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 262
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDG MP+ T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 442
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 443 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 622
RIR+LAD C+GLQGF VFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 623 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD+ERP+YTNLNR+I Q+VSSIT
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQVVSSIT 237
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 419 bits (1033), Expect = e-118
Identities = 190/239 (79%), Positives = 213/239 (89%)
Frame = +2
Query: 83 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 262
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDG MPSD+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 442
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 443 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 622
RIR+LAD C+GLQGF VFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 623 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL ++RP+YTNLNR+I Q+VSSIT
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIISQVVSSIT 237
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 417 bits (1028), Expect = e-117
Identities = 189/239 (79%), Positives = 212/239 (88%)
Frame = +2
Query: 83 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 262
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDG MPSD+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 442
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 443 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 622
RIR+LAD C+GLQGF VFH LLMERLSVDYGKKSKLEFSIYPAPQV TA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTA 178
Query: 623 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL ++RP+YTNLNR+I Q+VSSIT
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIISQVVSSIT 237
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 416 bits (1024), Expect = e-116
Identities = 188/239 (78%), Positives = 212/239 (88%)
Frame = +2
Query: 83 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 262
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDG MPS++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 442
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 443 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 622
RIR+LAD C+GLQGF VFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 623 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC+RNLD++RP+YTNLNR+I Q+VSSIT
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQVVSSIT 237
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 416 bits (1024), Expect = e-116
Identities = 186/240 (77%), Positives = 210/240 (87%)
Frame = +2
Query: 80 KMRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 259
+ RE IS+H+GQAGVQ+GNACWELYCLEHGIQPDG + + +LG DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 260 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVL 439
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+DVV+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 440 DRIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVST 619
DR+R+L + C GLQGFLVFH LLMERLSVDYGKKSKLEF IYPAPQVST
Sbjct: 125 DRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVST 184
Query: 620 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
++VEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLD+ RPTYTNLNRLI Q++SS+T
Sbjct: 185 SMVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDLARPTYTNLNRLIAQVISSVT 244
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 416 bits (1024), Expect = e-116
Identities = 188/239 (78%), Positives = 212/239 (88%)
Frame = +2
Query: 83 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 262
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDG MPS++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 442
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 443 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 622
RIR+LAD C+GLQGF VFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 623 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC+RNLD++RP+YTNLNR+I Q+VSSIT
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQVVSSIT 237
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 395 bits (972), Expect = e-110
Identities = 174/239 (72%), Positives = 207/239 (86%)
Frame = +2
Query: 83 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 262
MRE +S+HIGQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 442
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++DVV+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 443 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 622
R+R+L ++C LQGFL+FH L+MERLS+DYGKK+KLEFSIYPAPQ+ST+
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTS 180
Query: 623 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
+VEPYNS+LTTHTTLEHSDC+F++DNEAIY+I + NL + PTYT+LNRL+ Q+VSSIT
Sbjct: 181 MVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEITKVNLGVRSPTYTHLNRLLAQVVSSIT 239
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 390 bits (960), Expect = e-109
Identities = 178/240 (74%), Positives = 201/240 (83%), Gaps = 1/240 (0%)
Frame = +2
Query: 83 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDG-QMPSDKTLGGGDDSFNTFFSETGAG 259
MRE IS+H+GQAGVQIGNACWELYCLEHGI PDG M D G S TFFS+TG G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSMEPD----GNSGSLGTFFSDTGYG 56
Query: 260 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVL 439
+HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D L
Sbjct: 57 RHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTL 116
Query: 440 DRIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVST 619
DRIR+LA+ C GLQGF VFH +LMERLS +YGKKSKLEFSIYPAPQ+ST
Sbjct: 117 DRIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQIST 176
Query: 620 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
+VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNL + RPTY NLNR+I Q+VSSIT
Sbjct: 177 SVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLRVSRPTYNNLNRIISQVVSSIT 236
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 388 bits (956), Expect = e-108
Identities = 174/238 (73%), Positives = 200/238 (84%)
Frame = +2
Query: 86 RECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGKH 265
RE IS+H+GQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 266 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDR 445
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++DVV+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 446 IRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTAV 625
+++LA+ C GLQGF++FH LLMERLS +YGKK KLEF+IYPAPQVST++
Sbjct: 128 VKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSM 187
Query: 626 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
VEPYNSIL THTTLEHSDC FMVDNEAIYDICRRNLD+ RPTYTNLNRL+ QI+SSIT
Sbjct: 188 VEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSIT 245
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 366 bits (900), Expect = e-101
Identities = 166/238 (69%), Positives = 194/238 (81%)
Frame = +2
Query: 86 RECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGKH 265
REC+S+HIGQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 266 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDR 445
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++DVVLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 446 IRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTAV 625
IRK + C GLQGFLVFH LLMERLSV++GKKSKLEFS+YPAPQVST+V
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSV 184
Query: 626 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
VEPYNSILTTHTTLE SDC+FMVDNEAIYD+CR+ L +ERP+Y+NLNRLI Q+VSSIT
Sbjct: 185 VEPYNSILTTHTTLELSDCSFMVDNEAIYDLCRQKLHVERPSYSNLNRLIAQVVSSIT 242
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 345 bits (848), Expect = 2e-95
Identities = 155/217 (71%), Positives = 180/217 (82%)
Frame = +2
Query: 149 LYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 328
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 329 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDRIRKLADQCTGLQGFLVFHXXX 508
YR LFHPEQL++GKEDAAN YARG YTIG+E++DVV+DR+++LA+ C GLQGF++FH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 509 XXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAF 688
LLMERLS +YGKK KLEF+IYPAPQVST++VEPYNSIL THTTLEHSDC F
Sbjct: 121 GGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTF 180
Query: 689 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
MVDNEAIYDICRRNLD+ RPTYTNLNRL+ QI+SSIT
Sbjct: 181 MVDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSIT 217
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 221 bits (539), Expect = 6e-58
Identities = 106/239 (44%), Positives = 146/239 (61%)
Frame = +2
Query: 83 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 262
MRE + V GQ G QIG WE+ EHGIQPDG + L + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 442
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 443 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 622
+RK A+ C LQGF + H LL+ ++ +Y + FS+ P+P+VS
Sbjct: 119 VVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDT 178
Query: 623 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
VVEPYN+ L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLSNPTYGDLNHLVSVTMSGVT 237
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 218 bits (533), Expect = 3e-57
Identities = 105/239 (43%), Positives = 147/239 (61%)
Frame = +2
Query: 83 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 262
MRE + V GQ G QIG+ WE+ EHGIQPDG + L + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 442
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 443 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 622
IRK A+ C LQGF + H LL+ ++ +Y + FS+ P+P+VS
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDT 178
Query: 623 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVT 237
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 217 bits (531), Expect = 6e-57
Identities = 104/239 (43%), Positives = 146/239 (61%)
Frame = +2
Query: 83 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 262
MRE + + GQ G QIG+ WE+ EHGI P GQ D L + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 442
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 443 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 622
+RK A+ LQGF + H LL+ ++ +Y + FS+ P+P+VS
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 623 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
VVEPYN+ L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVT 237
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 217 bits (531), Expect = 6e-57
Identities = 104/239 (43%), Positives = 146/239 (61%)
Frame = +2
Query: 83 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 262
MRE + + GQ G QIG+ WE+ EHGI P GQ D L + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 442
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 443 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 622
+RK A+ LQGF + H LL+ ++ +Y + FS+ P+P+VS
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 623 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
VVEPYN+ L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVT 237
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 217 bits (530), Expect = 8e-57
Identities = 104/239 (43%), Positives = 147/239 (61%)
Frame = +2
Query: 83 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 262
MRE + V GQ G QIG+ WE+ EHGIQPDG + L + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 442
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 443 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 622
IRK A+ C LQGF + H LL+ ++ ++ + FS+ P+P+VS
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDT 178
Query: 623 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVT 237
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 216 bits (528), Expect = 1e-56
Identities = 103/239 (43%), Positives = 143/239 (59%)
Frame = +2
Query: 83 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 262
MRE + + GQ G QIG WE+ EHGI P G D L + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 442
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 443 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 622
+RK A+ C LQGF + H LL+ ++ +Y + + FS+ P+P+VS
Sbjct: 119 VVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDT 178
Query: 623 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
VVEPYN+ L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMTMSGVT 237
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 186 bits (453), Expect = 2e-47
Identities = 98/240 (40%), Positives = 140/240 (58%), Gaps = 1/240 (0%)
Frame = +2
Query: 83 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 262
M+E I+V +GQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 442
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 443 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 622
IR+ A+ L+GF + H LL+ +L +Y K+ SI P+ +VS
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDT 178
Query: 623 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE-RPTYTNLNRLIGQIVSSIT 799
VVEPYN+IL+ +++ D F +DNEAI+DIC+ NL +E R TY +LN L +S IT
Sbjct: 179 VVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALSGIT 238
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 186 bits (453), Expect = 2e-47
Identities = 98/240 (40%), Positives = 140/240 (58%), Gaps = 1/240 (0%)
Frame = +2
Query: 83 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 262
M+E I+V +GQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 442
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 443 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 622
IR+ A+ L+GF + H LL+ +L +Y K+ SI P+ +VS
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDT 178
Query: 623 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE-RPTYTNLNRLIGQIVSSIT 799
VVEPYN+IL+ +++ D F +DNEAI+DIC+ NL +E R TY +LN L +S IT
Sbjct: 179 VVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALSGIT 238
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 121 bits (291), Expect = 7e-28
Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 4/239 (1%)
Frame = +2
Query: 95 ISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGKHVPR 274
++VH+GQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 275 AVFVDLEPTVVDEV-RTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDVVLDR 445
AV VDLEP V++ + ++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 446 IRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVST-A 622
I + A+ L G L H LL+ERL + KK +S++ ST
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 623 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
VV PYN +L+ +E+ D ++DN A++ + + PT+ ++N L+ +I+S+ T
Sbjct: 184 VVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTST 242
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 121 bits (291), Expect = 7e-28
Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 4/239 (1%)
Frame = +2
Query: 95 ISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGKHVPR 274
++VH+GQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 275 AVFVDLEPTVVDEV-RTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDVVLDR 445
AV VDLEP V++ + ++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 446 IRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVST-A 622
I + A+ L G L H LL+ERL + KK +S++ ST
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 623 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 799
VV PYN +L+ +E+ D ++DN A++ + + PT+ ++N L+ +I+S+ T
Sbjct: 184 VVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTST 242
>Z81523-11|CAB04247.2| 403|Caenorhabditis elegans Hypothetical
protein F32H2.7 protein.
Length = 403
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Frame = +3
Query: 96 SPFTSVKPAYRLATPAGSC----TASSMESSLMVRCRQIRPSAVE-TTPLTRSS 242
SP T V A +ATP+GSC TA +ES +R Q +AVE T ++RSS
Sbjct: 334 SPTTGVLTAQSIATPSGSCQSVFTAKEIES---IRSSQDVLTAVEILTDMSRSS 384
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 30.3 bits (65), Expect = 1.7
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +2
Query: 38 AFFF*VVFLRKSSYKM--RECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLG 211
AFF V L KS + R+ +VH QI +C CL +G++P G P +
Sbjct: 34 AFFRRTVALTKSFKCITGRDDCNVHYSMH--QICRSCRHKKCLSNGMKPGGVQPKKPNIE 91
Query: 212 GGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDE 313
G FF+++G ++ F ++ P DE
Sbjct: 92 TG----RAFFTKSGLKRN---KKFANVSPQTADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 30.3 bits (65), Expect = 1.7
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +2
Query: 38 AFFF*VVFLRKSSYKM--RECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLG 211
AFF V L KS + R+ +VH QI +C CL +G++P G P +
Sbjct: 52 AFFRRTVALTKSFKCITGRDDCNVHYSMH--QICRSCRHKKCLSNGMKPGGVQPKKPNIE 109
Query: 212 GGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDE 313
G FF+++G ++ F ++ P DE
Sbjct: 110 TG----RAFFTKSGLKRN---KKFANVSPQTADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 30.3 bits (65), Expect = 1.7
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +2
Query: 38 AFFF*VVFLRKSSYKM--RECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLG 211
AFF V L KS + R+ +VH QI +C CL +G++P G P +
Sbjct: 34 AFFRRTVALTKSFKCITGRDDCNVHYSMH--QICRSCRHKKCLSNGMKPGGVQPKKPNIE 91
Query: 212 GGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDE 313
G FF+++G ++ F ++ P DE
Sbjct: 92 TG----RAFFTKSGLKRN---KKFANVSPQTADE 118
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 302 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDR 445
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 302 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDR 445
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 302 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDR 445
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 302 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDR 445
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 302 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDR 445
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 302 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDR 445
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 302 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDR 445
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 302 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDR 445
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
>Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = +3
Query: 198 IRPSAVETTPLTRSSARPARESTCHELSLLIWNQL*STRFVPALTVNCS----TPSSSSL 365
I P T ++ + H ++L+ L ST PALT + + P++S
Sbjct: 221 ITPKHTNLTTTATTTKKVTTTERAHLENILLTIPLKSTTQSPALTSSSAKPTKPPTTSET 280
Query: 366 AKRMLPITMPEDTIPLARRS 425
+K P T+P +P+ S
Sbjct: 281 SKPTFPSTLPAYVLPMTTTS 300
>Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = +3
Query: 198 IRPSAVETTPLTRSSARPARESTCHELSLLIWNQL*STRFVPALTVNCS----TPSSSSL 365
I P T ++ + H ++L+ L ST PALT + + P++S
Sbjct: 221 ITPKHTNLTTTATTTKKVTTTERAHLENILLTIPLKSTTQSPALTSSSAKPTKPPTTSET 280
Query: 366 AKRMLPITMPEDTIPLARRS 425
+K P T+P +P+ S
Sbjct: 281 SKPTFPSTLPAYVLPMTTTS 300
>Z49913-1|CAA90142.1| 340|Caenorhabditis elegans Hypothetical
protein ZK938.2 protein.
Length = 340
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 231 TRSSARPARESTCHELSLLIWNQL*STRFV---PALTVNCSTPSSSSLAKRMLPITMPED 401
+R+ P R+ H L +++Q S+ + AL VN + S+ S+ +LP T+PE+
Sbjct: 213 SRNQLTPCRKFDSHSCPLSVYHQTNSSNCIGEATALKVNVAPYSTKSI---ILPFTIPEE 269
>AL021387-2|CAA16168.1| 463|Caenorhabditis elegans Hypothetical
protein H01A20.1 protein.
Length = 463
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 74 SYKMRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPS-DKT 205
+Y R I +AG + +C CLE G++PD P DKT
Sbjct: 86 NYVCRYSKKCRIDKAGRNVCRSCRFQKCLEVGMEPDAIRPDRDKT 130
>AF273769-1|AAG15118.1| 463|Caenorhabditis elegans nuclear receptor
NHR-3 protein.
Length = 463
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 74 SYKMRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPS-DKT 205
+Y R I +AG + +C CLE G++PD P DKT
Sbjct: 86 NYVCRYSKKCRIDKAGRNVCRSCRFQKCLEVGMEPDAIRPDRDKT 130
>AF083222-1|AAD03680.1| 463|Caenorhabditis elegans nuclear receptor
NHR-3 protein.
Length = 463
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 74 SYKMRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPS-DKT 205
+Y R I +AG + +C CLE G++PD P DKT
Sbjct: 86 NYVCRYSKKCRIDKAGRNVCRSCRFQKCLEVGMEPDAIRPDRDKT 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,887,362
Number of Sequences: 27780
Number of extensions: 420331
Number of successful extensions: 1280
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -