Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1137
(810 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 68 2e-12
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 45 1e-05
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 44 3e-05
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 44 3e-05
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 43 4e-05
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 43 4e-05
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 43 6e-05
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 42 1e-04
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 41 2e-04
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 40 4e-04
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 38 0.002
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 38 0.002
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 38 0.002
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 37 0.003
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 37 0.003
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 37 0.004
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 36 0.005
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 36 0.007
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 36 0.009
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 35 0.012
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 35 0.016
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 33 0.036
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 33 0.048
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 32 0.084
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 31 0.15
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 31 0.19
SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi... 31 0.26
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 31 0.26
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 30 0.34
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 29 0.59
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 29 0.59
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 29 0.78
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 28 1.4
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 28 1.8
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 27 2.4
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 27 2.4
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 27 3.2
SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3 |Schiz... 27 3.2
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 26 5.5
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 26 5.5
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 26 7.3
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 26 7.3
SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation co... 26 7.3
SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosacc... 26 7.3
SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomy... 25 9.6
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 67.7 bits (158), Expect = 2e-12
Identities = 35/96 (36%), Positives = 55/96 (57%)
Frame = +2
Query: 221 AVPDSPYAIQCNVHPADLNTLINAILKETSPSFEKAVIFDFLVCGELLCASLAEHLQEKG 400
AV D+P + ++ L+ ++N +LK EK FDFLV G+LL +L E++ + G
Sbjct: 23 AVGDTPIFVPTSLKRYGLSQIVNHLLKT-----EKPTPFDFLVQGQLLKTTLDEYIVQNG 77
Query: 401 VSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQAT 508
+STE L++EY++ P HDDW+S +Q T
Sbjct: 78 LSTESILDIEYIQSTLPPAYLASFSHDDWISGIQLT 113
Score = 40.3 bits (90), Expect = 3e-04
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +1
Query: 508 SSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
S IL+ SYD +W G+ K G S +K+ SW +F++ S DQ W
Sbjct: 114 SDTILTSSYDGIARVWDKSGEIKFQSTGCGSSLKSASW---HIPNQSFLTASLDQKIFHW 170
Query: 688 VWNVPKNSVD 717
V P++ +D
Sbjct: 171 VIEEPESMLD 180
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 44.8 bits (101), Expect = 1e-05
Identities = 28/69 (40%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 484 LGVSCSGHSSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSG 660
L V+ S S W LSGS D S+ W + GQ L GH + V + V F D F SG
Sbjct: 542 LSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVIS---VCFSPDGRQFASG 598
Query: 661 SHDQTAILW 687
S D A +W
Sbjct: 599 SGDLRARIW 607
Score = 37.9 bits (84), Expect = 0.002
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +1
Query: 490 VSCSGHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHD 669
++ S + +I GS D + +WS G + GH V + ++F D + +SGS D
Sbjct: 449 IAISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHKESVYS---IAFSPDSSILLSGSLD 505
Query: 670 QTAILW 687
+T +W
Sbjct: 506 KTIKVW 511
Score = 31.5 bits (68), Expect = 0.15
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 490 VSCSGHSSWILSGSYDNSLHIWSTKGQH-KLAIPGHTSPVKAVSWVSFQGDQATFVSGSH 666
++ S ++++G+ D + +W Q + GH + ++ F + VSGS
Sbjct: 366 IAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLD---FSHNGRFIVSGSG 422
Query: 667 DQTAILW 687
D+TA LW
Sbjct: 423 DRTARLW 429
Score = 26.2 bits (55), Expect = 5.5
Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Frame = +1
Query: 490 VSCSGHSSWILSGSYDNSLHIWSTKGQHKLAIPG----------HTSPVKAVSWVSFQGD 639
++ S SS +LSGS D ++ +W + + + +T V V+ D
Sbjct: 490 IAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPD 549
Query: 640 QATFVSGSHDQTAILWVWNVPKNSVDC 720
+SGS D++ W ++ + C
Sbjct: 550 SRWGLSGSKDRSMQFWDLQTGQSYLTC 576
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 44.0 bits (99), Expect = 3e-05
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +1
Query: 484 LGVSCSGHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGS 663
LGV+ S +S ++ +GS D ++++WS G + +PGH +V+ V F Q +S S
Sbjct: 273 LGVAWSRNSRFVGAGSSDKNVYVWSATGDLRYVLPGHEG---SVNHVDFHPHQDIILSCS 329
Query: 664 HDQTAIL 684
D+T L
Sbjct: 330 SDRTIFL 336
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 44.0 bits (99), Expect = 3e-05
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +1
Query: 484 LGVSCSGHSSWILSGSYDNSLHIWSTKGQH-KLAIPGHTSPVKAVSWVSFQGDQATFVSG 660
L V+ S WI+SGS D ++ WS H +L + GH + V +V+ VS G F +G
Sbjct: 516 LSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVA-VSPNGH--CFATG 572
Query: 661 SHDQTAILW 687
S D A +W
Sbjct: 573 SGDLRARIW 581
Score = 37.1 bits (82), Expect = 0.003
Identities = 23/66 (34%), Positives = 31/66 (46%)
Frame = +1
Query: 490 VSCSGHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHD 669
V S +I +GS D + IW++ G + GH V + V+F D VSGS D
Sbjct: 423 VMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYS---VAFSPDGKYLVSGSLD 479
Query: 670 QTAILW 687
T LW
Sbjct: 480 NTIKLW 485
Score = 33.5 bits (73), Expect = 0.036
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 490 VSCSGHSSWILSGSYDNSLHIW--STKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGS 663
V+ S ++ +G D + IW + K ++L + GH + ++ F D T VSGS
Sbjct: 340 VAFSPDGKYLATGVEDQQIRIWDIAQKRVYRL-LTGHEQEIYSLD---FSKDGKTLVSGS 395
Query: 664 HDQTAILW 687
D+T LW
Sbjct: 396 GDRTVCLW 403
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 43.2 bits (97), Expect = 4e-05
Identities = 23/75 (30%), Positives = 43/75 (57%)
Frame = +1
Query: 508 SSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
S+ ++SGS D ++ +W G ++ + GHT PV +V + D+ +SGS D T +
Sbjct: 363 STLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIR---DRGLVLSGSDDST--IK 417
Query: 688 VWNVPKNSVDCMITY 732
+W++ N+ C+ T+
Sbjct: 418 IWSLETNT--CLHTF 430
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 517 ILSGSYDNSLHIWSTKGQHKLAI-PGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
+ SGSYD ++ +W+ ++A+ GH+S V + Q DQ +SGS D+T +W
Sbjct: 286 LASGSYDATIRLWNLATFQQVALLEGHSSGVTCL-----QFDQCKLISGSMDKTIRIW 338
Score = 35.9 bits (79), Expect = 0.007
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 466 LFNARRLGVSCSGHSSW-ILSGSYDNSLHIWSTKGQHKLAI-PGHTSPVKAVSWVSFQGD 639
L GV+C ++SGS D ++ IW+ + ++I GHT V +++ D
Sbjct: 308 LLEGHSSGVTCLQFDQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTF-----D 362
Query: 640 QATFVSGSHDQTAILW 687
VSGS D T LW
Sbjct: 363 STLLVSGSADCTVKLW 378
Score = 30.3 bits (65), Expect = 0.34
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 517 ILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVW 693
++SG++D + +W + H L H+ PV +V+ GD VSGS D LW++
Sbjct: 487 LISGAHDGVVKVWEACECVHTLK--NHSEPVTSVAL----GD-CEVVSGSEDGKIYLWLF 539
Query: 694 NVPKN 708
N N
Sbjct: 540 NNAPN 544
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 43.2 bits (97), Expect = 4e-05
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 517 ILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
+ SGS DN++ IW+ K + L + GHT+P+ V W G Q S S+D+T +W
Sbjct: 242 LASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRW----GGQNWIYSSSYDKTIRIW 295
Score = 36.3 bits (80), Expect = 0.005
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 499 SGHSSWILSGSYDNSLHIWSTKGQH-KLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQT 675
S S ++S S D +L +W + + K +PGH V AV W D SG D+
Sbjct: 440 STDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDW---SPDGQRVASGGADKA 496
Query: 676 AILW 687
+W
Sbjct: 497 VRIW 500
Score = 33.1 bits (72), Expect = 0.048
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 502 GHSSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQT 675
G +WI S SYD ++ IW K G+ + GH + V +S + SG++D T
Sbjct: 278 GGQNWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLS----LSTEHVLRSGAYDHT 332
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 42.7 bits (96), Expect = 6e-05
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 487 GVSCSGHSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGS 663
G + S + ++LS S D S +WS + L A GHT PV V++ F G F + S
Sbjct: 384 GTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPF-GHY--FATAS 440
Query: 664 HDQTAILW 687
HDQTA LW
Sbjct: 441 HDQTAQLW 448
Score = 32.3 bits (70), Expect = 0.084
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 502 GHSSWILSGSYDNSLHIWSTKGQHKLAI-PGHTSPVKAVSWVSFQGDQATFVSGSHDQTA 678
GH + + S+D + +WS + L + GH S V V+ F + A ++GS D+T
Sbjct: 433 GH--YFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVT---FHPNSAYVLTGSSDKTC 487
Query: 679 ILW 687
LW
Sbjct: 488 RLW 490
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 41.5 bits (93), Expect = 1e-04
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Frame = +1
Query: 487 GVSC------SGHSSWILSGSYDNSLHIWSTKGQHKL--AIPGHTSPVKAVSWVSFQGDQ 642
G+SC SGH +LSGS DN + IW L GH P++ +S F D
Sbjct: 268 GISCLRFFPISGHL--LLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLS---FSQDG 322
Query: 643 ATFVSGSHDQTAILW 687
+F+S S D+T LW
Sbjct: 323 RSFLSTSFDKTIKLW 337
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 40.7 bits (91), Expect = 2e-04
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +1
Query: 433 LGKVPCTNSTGLFNARRLGVSCSGHSSWILSGSYDNSLHIWSTKGQHKLAIP--GHTSPV 606
L K CT+ + L VS S + ++SGS D ++ IW+ G K I GH+ V
Sbjct: 92 LEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWV 151
Query: 607 KAVSWVSFQGDQATFVSGSHDQTAILW 687
V + S D TFVS D+ +W
Sbjct: 152 SCVRF-SPNPDNLTFVSAGWDKAVKVW 177
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 39.9 bits (89), Expect = 4e-04
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 487 GVSCSGHSSWILSGSYDNSLHIWSTKGQHKLA-IPGHTSPVKAVSWVSFQGDQATFVSGS 663
GVS S +ILS S D +WS + + GH +P+ V + F F + S
Sbjct: 408 GVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFG---YYFATAS 464
Query: 664 HDQTAILW 687
HDQTA LW
Sbjct: 465 HDQTARLW 472
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 37.9 bits (84), Expect = 0.002
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 487 GVSCSGHSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGS 663
G++ S++LSGS D ++ +W+ K + + IP S V+A+ WV+ Q ++ +
Sbjct: 194 GLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHS-VEAIGWVNGQPEEKILYTAG 252
Query: 664 HDQTAILWVW 693
+ W W
Sbjct: 253 EGNLILAWDW 262
Score = 28.3 bits (60), Expect = 1.4
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Frame = +1
Query: 484 LGVSCSGHSSWILSGSYDNSLHIWSTKGQHKL-----AIPGHTSPVKAVSW--VSFQGDQ 642
L + S W+ +G+ DN++ +W+ + + GHT+ V AV+ + G
Sbjct: 368 LTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYP 427
Query: 643 ATFVSGSHDQT 675
S S D+T
Sbjct: 428 TFLASSSQDRT 438
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 37.9 bits (84), Expect = 0.002
Identities = 21/67 (31%), Positives = 37/67 (55%)
Frame = +1
Query: 505 HSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAIL 684
+S I++GS+D++ +W+ GQ K + GH S V W + F++GS D+ ++
Sbjct: 108 NSETIITGSWDSTARVWAL-GQCKYVLKGHQSSV----WAVLALGEDIFITGSADK--LI 160
Query: 685 WVWNVPK 705
+WN K
Sbjct: 161 KIWNGEK 167
Score = 29.9 bits (64), Expect = 0.45
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +1
Query: 523 SGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
S S D + +W++ G+ + GHTS V +++++ +Q S D+T +W
Sbjct: 191 SCSNDGVIKLWTSDGEFLYELHGHTSFVYSLTYIH---NQQLIASCGEDRTIRIW 242
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 37.5 bits (83), Expect = 0.002
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +1
Query: 484 LGVSCSGHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGS 663
+ V S +SGSYD ++ I++ + H + HT ++ V+ V F D SGS
Sbjct: 277 MSVDFSPTGQEFVSGSYDKTIRIYNVREGHSRDVY-HTKRMQRVTAVKFSMDAQYIFSGS 335
Query: 664 HDQTAILW 687
D LW
Sbjct: 336 DDSNVRLW 343
Score = 31.9 bits (69), Expect = 0.11
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +1
Query: 520 LSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNV 699
++GS D++L+++ + K A+ + V AV V F FVSGS+D+T + ++NV
Sbjct: 246 VAGSEDHNLYMYDMRNL-KRALHVYKDHVSAVMSVDFSPTGQEFVSGSYDKT--IRIYNV 302
Query: 700 PK-NSVDCMITYRGSR 744
+ +S D T R R
Sbjct: 303 REGHSRDVYHTKRMQR 318
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 37.1 bits (82), Expect = 0.003
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 487 GVSCSGHSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGS 663
G+ + + + + SG DN+L +W + L + H + VKA++W Q G+
Sbjct: 379 GLEWNSNENLLASGGNDNALMVWDKFEEKPLYSFHNHIAAVKAITWSPHQRGILASGGGT 438
Query: 664 HDQTAILW 687
D+T LW
Sbjct: 439 ADRTIKLW 446
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 37.1 bits (82), Expect = 0.003
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +1
Query: 493 SCSG--HSSWILSGSYDNSLHIWSTKGQHKLA-IPGHTSPVKAVSWVSFQG-DQATFVSG 660
SC G +++LSGS D+ + IW + LA + GH VK V++V++ D F S
Sbjct: 433 SCFGGKDDTFVLSGSEDDKIRIWHRESGKLLATLSGH---VKCVNYVAYNPVDPYQFASA 489
Query: 661 SHDQTAILW 687
D T +W
Sbjct: 490 GDDNTVRIW 498
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 36.7 bits (81), Expect = 0.004
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +1
Query: 499 SGHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQT 675
SG+ ++SGSYD+S+ IW + G+ + GH+ + + V ++ ++ +SGS D++
Sbjct: 514 SGYGDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYS---VLYEPERNICISGSMDKS 570
Query: 676 AILW 687
+W
Sbjct: 571 IRVW 574
Score = 33.9 bits (74), Expect = 0.027
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 12/81 (14%)
Frame = +1
Query: 505 HSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWV-----------SFQGDQAT 648
H + ++SGS D ++ +W+ K + GH S ++ + + + DQ
Sbjct: 400 HENTLVSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCLEILVPSRLIRHGVEIVEPDQPY 459
Query: 649 FVSGSHDQTAILWVWNVPKNS 711
VSGS D T L VW +PKN+
Sbjct: 460 IVSGSRDHT--LRVWKLPKNT 478
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 517 ILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
++SGS D+++ IW G+ + +P ++ + SF D+ +SG +D + LW
Sbjct: 602 LISGSADSTIRIWDLNTGKPLMVLPSNSGYIS-----SFVSDEHKIISG-NDGSVKLW 653
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 36.3 bits (80), Expect = 0.005
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +1
Query: 496 CSGHSS--WILSGSYDNSLHIWSTKGQHKLAI-PGHTSPVKAVSWVSFQGDQATFVSGSH 666
C+ H WILS S D ++ IW+ + ++ +AI GH+ V +F + VS S
Sbjct: 101 CTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMC---AAFHPSEDLIVSASL 157
Query: 667 DQTAILW 687
DQT +W
Sbjct: 158 DQTVRVW 164
Score = 35.5 bits (78), Expect = 0.009
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 472 NARRLGVSCSGHSSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQAT 648
++R GV+ WIL+ ++ + +W + G GH PV+ ++F Q
Sbjct: 11 SSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRG---IAFHPTQPL 67
Query: 649 FVSGSHDQTAILW 687
FVSG D +W
Sbjct: 68 FVSGGDDYKVNVW 80
Score = 29.9 bits (64), Expect = 0.45
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 520 LSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVW 693
+SG D +++W+ K + L ++ GH V+ + F + +S S DQT +W W
Sbjct: 69 VSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCT---FHHEYPWILSCSDDQTIRIWNW 124
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 35.9 bits (79), Expect = 0.007
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +1
Query: 517 ILSGSYDNSLHIWSTKGQH---KLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
++SGSYDNS+ W G + GHT+ V A ++F + T S +D LW
Sbjct: 438 LVSGSYDNSICFWRDDGDDWALTCQLQGHTNTVWA---LAFSPNGNTLASADNDGNVFLW 494
Query: 688 V 690
+
Sbjct: 495 I 495
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 580 AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPK-NSVDCM 723
A+ GH + VK ++W S G+ + S D++ +W+W + + DC+
Sbjct: 373 ALEGHENEVKCIAW-SCNGNY--LATCSRDKS--VWIWEATEDDEFDCL 416
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 35.5 bits (78), Expect = 0.009
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +1
Query: 493 SCSGHSS--WILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSH 666
S + HS W+LSG + + ++ST+ Q + VS ++ G + +SGS
Sbjct: 193 SLAAHSRGLWVLSGVNNGDIILYSTRHQEGYPVTSLKKHTAPVSCLALHGSEKKVLSGSW 252
Query: 667 DQTAILWVWNVPKNSVDCMITY 732
D+ +++ W++ N+ D + TY
Sbjct: 253 DK--MVYYWDL--NTGDAISTY 270
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 35.1 bits (77), Expect = 0.012
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 517 ILSGSYDNSLHIWSTKGQ-HKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
+ SG DN + IW + K H + VKAV+W +Q + G+ D+ W
Sbjct: 319 LASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFW 376
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 34.7 bits (76), Expect = 0.016
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +1
Query: 469 FNARRLGVSCSGHSSWIL-SGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQ 642
F A V C + I+ SGS D ++ +W + L + GH+ V + F +
Sbjct: 217 FRATLDSVYCVQYDDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLD---FCRRR 273
Query: 643 ATFVSGSHDQTAILWVW 693
VSGS D T I+W W
Sbjct: 274 NLLVSGSSDSTIIIWDW 290
Score = 33.5 bits (73), Expect = 0.036
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 517 ILSGSYDNSLHIWSTKGQHKLAIP-GHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVW 693
++SGS D+++ IW + + L + GHT V V VS + +S S D TA +W
Sbjct: 276 LVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVV-VS----ENYIISSSRDHTARVWRL 330
Query: 694 NVPKNSVDCMITYRG 738
+ + CM RG
Sbjct: 331 DATSPAEACMHVLRG 345
Score = 26.6 bits (56), Expect = 4.2
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 517 ILSGSYDNSLHIW--STKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWV 690
I+SG YD ++ IW +T QH + H S V + F D ++ +H ++W
Sbjct: 442 IVSGGYDGTVRIWNFNTGEQHCVL---HNSRNSRVFGLQF--DHRRIIACTHSSEILVWN 496
Query: 691 WNVPKNSVDC 720
++ + +DC
Sbjct: 497 FD---DGLDC 503
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 33.5 bits (73), Expect = 0.036
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 517 ILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
++SGS+D ++ IW+ + G +P H+ P+ + VS D + S+D A +W
Sbjct: 153 LVSGSWDETVRIWNLQDGTCLRMLPAHSEPIIS---VSISADGTLCATASYDGMARIW 207
Score = 33.1 bits (72), Expect = 0.048
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +1
Query: 490 VSCSGHSSWILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSH 666
VS S + WI + S D ++ IWS + + + GH + V W + S S
Sbjct: 60 VSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWAT---GSKYLASASD 116
Query: 667 DQTAILWVWNVPKNSVDCM 723
D+T +W + + SV C+
Sbjct: 117 DKTIRIWDFE-KRCSVRCL 134
Score = 31.9 bits (69), Expect = 0.11
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 508 SSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAIL 684
S ++ S S D ++ IW + + + + GHT+ VS + F VSGS D+T +
Sbjct: 108 SKYLASASDDKTIRIWDFEKRCSVRCLKGHTN---YVSSIDFNPLGTLLVSGSWDETVRI 164
Query: 685 W 687
W
Sbjct: 165 W 165
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 33.1 bits (72), Expect = 0.048
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 517 ILSGSYDN-SLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
+ +GS D+ + +WS + GQ + GH PV ++S F + SGS D+T +W
Sbjct: 439 VCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLS---FNSSGSLLASGSWDKTVRIW 494
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 737 GHDKGIECLSXSADGNRFAXGSWD 808
GH+ + LS ++ G+ A GSWD
Sbjct: 465 GHEGPVSSLSFNSSGSLLASGSWD 488
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 32.3 bits (70), Expect = 0.084
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 716 TV*SLTGGHDKGIECLSXSADGNRFAXGSWD 808
T+ SLTG H+ I L+ ++DG A GSWD
Sbjct: 266 TITSLTG-HENRISSLALTSDGTMLATGSWD 295
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 31.5 bits (68), Expect = 0.15
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 517 ILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQ 633
+ SG DN+L +W + L HT+ VKA+ W Q
Sbjct: 264 LASGGNDNNLFVWDYRSSRPLHKFEEHTAAVKAIGWSPHQ 303
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 31.1 bits (67), Expect = 0.19
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1
Query: 565 GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPKNSVDCM 723
G + ++ GHT V AV W ++ SGS D T LW +S CM
Sbjct: 179 GSYTHSLSGHTGNVLAVDWC--PKNEFVLASGSADGTCRLWDIRKVSSSFACM 229
>SPAC23H3.08c |bub3||mitotic spindle checkpoint protein
Bub3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 320
Score = 30.7 bits (66), Expect = 0.26
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 734 GGHDKGIECLSXSADGNRFAXGSWD 808
G H KG+ C+S N F GSWD
Sbjct: 92 GNHGKGVSCISKLRLENCFISGSWD 116
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 30.7 bits (66), Expect = 0.26
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 484 LGVSCSGHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGS 663
L + SG +++ +GS D ++ ++ Q + +I S V + W+SF + V GS
Sbjct: 309 LSLKWSGTDTYLAAGSADGTITLFDQLKQTQYSIDTLASSVLDIEWISFDEFVTSDVEGS 368
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 30.3 bits (65), Expect = 0.34
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 574 KLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
K + GH V+ +S+ G AT SGS D+ LW
Sbjct: 184 KAVLRGHLDWVRTLSFKKTSGSTATLASGSQDRYIRLW 221
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 29.5 bits (63), Expect = 0.59
Identities = 22/82 (26%), Positives = 31/82 (37%)
Frame = +1
Query: 499 SGHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTA 678
S ++ S S D +L +WS + L G + V + VS D T
Sbjct: 203 SSDGRYLCSVSEDRTLRLWSIESSPFLIATGFGHSARVWRCVFLPNKEIATVS--EDLTL 260
Query: 679 ILWVWNVPKNSVDCMITYRGSR 744
LW WN ++ TY G R
Sbjct: 261 RLWTWN--DKTLTNTYTYTGHR 280
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 29.5 bits (63), Expect = 0.59
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +1
Query: 508 SSWILSGSYDNSLHIWSTKGQHK--LAIPGHTSPVKAVSWVS 627
+SW + S+DNS+ +W G++K + + S + + W+S
Sbjct: 354 ASWNIYNSFDNSMVLWCPYGKNKTLICLLNFQSSLLSFEWIS 395
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 29.1 bits (62), Expect = 0.78
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +1
Query: 490 VSCSGHSSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSH 666
V S SW+ +G+ +L+IWS K G H P ++ + F D + S+
Sbjct: 82 VQSSPCGSWLAAGTEKGNLYIWSLKSGALIYFFRAHYQP---LTILKFSNDGMVLFTASN 138
Query: 667 DQTAILWV 690
D W+
Sbjct: 139 DGDVFAWL 146
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 484 LGVSCSGHSSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSW 621
L + S + +I+SG L + ST+ G+ + GHTSPV++V++
Sbjct: 149 LCIDYSPNGRFIVSGHQTGQLFLISTETGRLFHVLSGHTSPVRSVAF 195
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/80 (23%), Positives = 33/80 (41%)
Frame = +1
Query: 472 NARRLGVSCSGHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATF 651
N + C G W+ + S D ++ +W + H SPV + QG+
Sbjct: 85 NVTAIAFHCDG--KWLATSSEDGTVKVWDMRAPSVQRNYDHKSPVNDLLIHPNQGELL-- 140
Query: 652 VSGSHDQTAILWVWNVPKNS 711
S DQ+ + W++ +NS
Sbjct: 141 ---SCDQSGRVRAWDLGENS 157
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 508 SSWILSGSYDNSLHIWSTK 564
S+ + SGSYDNS+ IW +
Sbjct: 546 SNHLYSGSYDNSVRIWDLR 564
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 502 GHSSWILSGSYDNSLHIWS 558
G SWI S +D SL+IW+
Sbjct: 288 GDGSWIASVGWDESLYIWN 306
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 637 DQATFVSGSHDQTAILWVWNVPKNSVDCMITYRGSR 744
D+ V+GS D T LW+ N+P NSV + SR
Sbjct: 115 DRRIVVTGSWDGTIKLWLGNLP-NSVQTLNNGSNSR 149
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 27.1 bits (57), Expect = 3.2
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +1
Query: 451 TNSTGLFNARRLGVSCSGHSSWILSGSYDNSLHIWSTKGQHK---LAIPGHTSPVKAVSW 621
T TG N + S ++LSGS D L +W ++K L GH + + +
Sbjct: 42 TGHTGCVNT----LDWSADGEFLLSGSDDTRLIVWDVFNEYKPRHLISTGHVQNIFSAKF 97
Query: 622 VSFQGDQATFVSGSHDQ 672
V + ++ +S S D+
Sbjct: 98 VPYSNNR-QILSASGDK 113
>SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 900
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 499 SGHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSW 621
SGH ++ + + DN L S +G+ + GHT V+AV W
Sbjct: 105 SGHYIFVTTTAGDNCLFTPSHQGRVLTKLKGHT--VEAVQW 143
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 26.2 bits (55), Expect = 5.5
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 517 ILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
+L+G + I+ + L A+ H PV + + TF+SGS D+T +W
Sbjct: 96 LLAGDATGLVQIFDLSTRSILRALDAHQFPVHVTQFCPYAN--TTFLSGSDDKTVKVW 151
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +1
Query: 487 GVSCSGHS---SWILSGSYDNSLHIWSTKGQHK 576
G+SC S +++LS DN+L +W + +K
Sbjct: 300 GISCLSFSQDGNYLLSRGEDNALRVWDLRNSNK 332
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 25.8 bits (54), Expect = 7.3
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 490 VSCSGHSSWILSGSYDNSLHIW-STKGQHKLAIPGHTSPVKAVS 618
V+C G I+S SYD +L +W ++ G + GH V +V+
Sbjct: 583 VACLG--DLIVSASYDGTLRVWKASTGVCLHVLRGHVGRVYSVT 624
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 25.8 bits (54), Expect = 7.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 340 FLSMWRVTLCLPRRALTRKRGID 408
F+ + T+C P R LT RG+D
Sbjct: 450 FIQVANETMCRPIRKLTESRGLD 472
>SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation
complex subunit Cdc45|Schizosaccharomyces pombe|chr
1|||Manual
Length = 638
Score = 25.8 bits (54), Expect = 7.3
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 424 GRILGKVPCTNSTGLFNARRLGV--SCSGHSSWILSGSYDNSLHIWSTKGQHKL 579
GR GK P S L + R + S + S + S + LHIWS +G+ +L
Sbjct: 295 GRAHGKTPHDQSIRLEDEFRFMLVRHWSLYDSMLHSAYVGSRLHIWSEEGRKRL 348
>SPAC12B10.03 |||WD repeat protein, human WDR20
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 25.8 bits (54), Expect = 7.3
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1
Query: 469 FNARRLGVSCSGHSSWILSGSYD 537
F R+L C GH SW+ +D
Sbjct: 393 FPLRKLVARCQGHKSWVTDVIFD 415
>SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 800
Score = 25.4 bits (53), Expect = 9.6
Identities = 10/44 (22%), Positives = 24/44 (54%)
Frame = +1
Query: 487 GVSCSGHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVS 618
G+S + + ++LSG + L +W + H+ +P S + +++
Sbjct: 267 GLSWALNGEYLLSGGQEGVLVLWQMETSHRQFLPRLGSSILSIA 310
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,354,742
Number of Sequences: 5004
Number of extensions: 70045
Number of successful extensions: 345
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 325
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 394431430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -