Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1137
(810 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily ass... 55 7e-08
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 48 1e-05
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 40 0.002
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z66515-11|CAA91354.1| 858|Caenorhabditis elegans Hypothetical p... 37 0.015
Z48178-10|CAA88206.1| 858|Caenorhabditis elegans Hypothetical p... 37 0.015
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 37 0.015
U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated p... 37 0.020
AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein. 37 0.020
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 36 0.034
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 36 0.034
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 36 0.034
Z66515-12|CAC42333.1| 860|Caenorhabditis elegans Hypothetical p... 36 0.045
Z48178-11|CAC42247.1| 860|Caenorhabditis elegans Hypothetical p... 36 0.045
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 35 0.060
Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical pr... 35 0.060
X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein. 35 0.060
AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeri... 35 0.060
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 35 0.079
U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell l... 34 0.14
AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein. 34 0.14
AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical ... 34 0.14
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 34 0.14
Z80216-3|CAB02280.1| 373|Caenorhabditis elegans Hypothetical pr... 33 0.24
AC025727-6|AAY55898.1| 558|Caenorhabditis elegans Hypothetical ... 33 0.32
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 32 0.56
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 32 0.56
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 32 0.56
U21321-1|AAG00051.1| 507|Caenorhabditis elegans Fizzy (cdc20 pr... 31 0.74
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical pr... 31 1.3
U53155-9|AAC48273.1| 328|Caenorhabditis elegans Seven tm recept... 31 1.3
AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,... 31 1.3
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 31 1.3
Z48809-2|CAA88747.1| 406|Caenorhabditis elegans Hypothetical pr... 30 2.3
U88174-3|ABP57824.1| 1058|Caenorhabditis elegans Tomosyn synapti... 30 2.3
U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synapti... 30 2.3
U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synapti... 30 2.3
AY997306-1|AAY44303.1| 1133|Caenorhabditis elegans TOM-1 isoform... 30 2.3
AY997305-1|AAY44302.1| 1128|Caenorhabditis elegans TOM-1 isoform... 30 2.3
AY912103-1|AAX89146.1| 1058|Caenorhabditis elegans tomosyn protein. 30 2.3
AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isofo... 30 2.3
Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical pr... 29 3.0
AJ011523-1|CAB38019.1| 760|Caenorhabditis elegans CHE-2 protein... 29 3.0
AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeri... 29 3.0
AF025464-8|AAB71019.1| 714|Caenorhabditis elegans Hypothetical ... 29 3.0
AC006635-2|AAK68383.1| 760|Caenorhabditis elegans Abnormal chem... 29 3.0
Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical pr... 29 3.9
U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical p... 29 3.9
U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical p... 29 3.9
Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical pr... 29 5.2
U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical pr... 29 5.2
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 29 5.2
AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin... 28 6.9
Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical p... 28 9.1
Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical p... 28 9.1
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 28 9.1
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 28 9.1
>U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily
assigned gene nameprotein 345 protein.
Length = 439
Score = 54.8 bits (126), Expect = 7e-08
Identities = 31/93 (33%), Positives = 50/93 (53%)
Frame = +2
Query: 224 VPDSPYAIQCNVHPADLNTLINAILKETSPSFEKAVIFDFLVCGELLCASLAEHLQEKGV 403
+PD+ + + D+N L+N ++ ++++ F+FLV L SLAE ++E V
Sbjct: 35 IPDAVFDVPTGAECDDMNLLLNKTIEANDGAWKERR-FEFLVGETFLRTSLAEFIEEYEV 93
Query: 404 STEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQ 502
TE L+VE + AP P + DWVS+VQ
Sbjct: 94 ETETILKVECVIGIEAPKPLHDIQAPDWVSSVQ 126
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 737 GHDKGIECLSXSADGNRFAXGSWD 808
GH++ +EC+S ++D R GS D
Sbjct: 209 GHERAVECVSVNSDSTRAISGSVD 232
Score = 24.2 bits (50), Expect(2) = 2.8
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +1
Query: 577 LAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
+ I GH V AV W + A S S D T + W
Sbjct: 273 VTIGGHRDKVSAVEWCPWNSGHA--FSCSWDHTIVEW 307
Score = 23.8 bits (49), Expect(2) = 2.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 490 VSCSGHSSWILSGSYDNSLHIWS 558
VS + S+ +SGS D +L IW+
Sbjct: 217 VSVNSDSTRAISGSVDTNLKIWN 239
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 508 SSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAIL 684
SS ++SGS+D S+ IW K G +P H+ PV A VSF D + SGS+D +
Sbjct: 183 SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSA---VSFNRDGSLIASGSYDGLVRI 239
Query: 685 W 687
W
Sbjct: 240 W 240
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 514 WILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKA 612
WI+SGS D ++IW+ + + + + GHT PV A
Sbjct: 315 WIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLA 348
Score = 32.3 bits (70), Expect = 0.42
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 490 VSCSGHSSWILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSH 666
VS + S I SGSYD + IW T GQ + +P V++V F + ++ +
Sbjct: 219 VSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENP--PVAFVKFSPNGKYILASNL 276
Query: 667 DQTAILW 687
D T LW
Sbjct: 277 DSTLKLW 283
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 517 ILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
I SGS+D ++ IW + G +IPGH P VS V F D A SGS+D +W
Sbjct: 205 IASGSFDETIRIWCARNGNTIFSIPGHEDP---VSSVCFNRDGAYLASGSYDGIVRIW 259
Score = 31.5 bits (68), Expect = 0.74
Identities = 25/84 (29%), Positives = 41/84 (48%)
Frame = +1
Query: 487 GVSCSGHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSH 666
G+ S ++ SGS D S+ IW ++ + GH + SW S D VS S
Sbjct: 112 GIKFSPDGRYMGSGSADCSIKIWRMDFVYEKTLMGHRLGINEFSWSS---DSKLIVSCSD 168
Query: 667 DQTAILWVWNVPKNSVDCMITYRG 738
D+ ++ V++V +S C+ T +G
Sbjct: 169 DK--LVKVFDV--SSGRCVKTLKG 188
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 514 WILSGSYDNSLHIWSTKGQHKL-AIPGHTSPV 606
WI+SGS D+ ++IW+ + + L + GH + V
Sbjct: 334 WIVSGSEDHKVYIWNLQTREILQTLDGHNTAV 365
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 499 SGHSSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQT 675
S + +I S S+D S+ +W + G++ ++ GH PV V+W D VSGS D T
Sbjct: 369 SPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAW---SADSRLLVSGSADST 425
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 535 DNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
D ++ IW T +G + GHT+ V + W G + SGS D+T +W
Sbjct: 216 DGNIFIWDTVQGTVVRCLSGHTASVTCLRW----GGEGLIYSGSQDRTVKMW 263
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 580 AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
+IPGH PV + F D SGS DQT +W
Sbjct: 100 SIPGHGEPVISAQ---FSPDGRGLASGSGDQTMRIW 132
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 490 VSCSGHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSH 666
V S + LSGS+D +L +W +G HT V +V+ F D VSGS
Sbjct: 75 VVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVA---FSADNRQIVSGSR 131
Query: 667 DQTAILW 687
D++ LW
Sbjct: 132 DKSIKLW 138
Score = 34.3 bits (75), Expect = 0.10
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 484 LGVSCSGHSSWILSGSYDNSLHIWSTKGQHKLAIPG--HTSPVKAVSWVSFQGDQATFVS 657
L V+ S + I+SGS D S+ +W+T Q K I HT V V + D VS
Sbjct: 115 LSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRD-PVIVS 173
Query: 658 GSHDQTAILWVWNV 699
D+ ++ VWN+
Sbjct: 174 AGWDK--VVKVWNL 185
>Z66515-11|CAA91354.1| 858|Caenorhabditis elegans Hypothetical
protein C05C10.6a protein.
Length = 858
Score = 37.1 bits (82), Expect = 0.015
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Frame = +1
Query: 466 LFNARRLGVSC---SGHSSWILSGSYDNSLHIW-----STKGQHKLAIPGHTSPVKAVSW 621
+FN + V C + ++ +LSGS+D+++ IW ++ + PGHT V A++
Sbjct: 112 IFNEHKQNVCCLHINEKATHMLSGSWDSNVIIWPITELNSSSFTTIVCPGHTLSVWALA- 170
Query: 622 VSFQGDQATFVSGSHDQTAILW 687
SF T++S S D+T +W
Sbjct: 171 -SFPDLPNTYLSASADKTIRMW 191
>Z48178-10|CAA88206.1| 858|Caenorhabditis elegans Hypothetical
protein C05C10.6a protein.
Length = 858
Score = 37.1 bits (82), Expect = 0.015
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Frame = +1
Query: 466 LFNARRLGVSC---SGHSSWILSGSYDNSLHIW-----STKGQHKLAIPGHTSPVKAVSW 621
+FN + V C + ++ +LSGS+D+++ IW ++ + PGHT V A++
Sbjct: 112 IFNEHKQNVCCLHINEKATHMLSGSWDSNVIIWPITELNSSSFTTIVCPGHTLSVWALA- 170
Query: 622 VSFQGDQATFVSGSHDQTAILW 687
SF T++S S D+T +W
Sbjct: 171 -SFPDLPNTYLSASADKTIRMW 191
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 37.1 bits (82), Expect = 0.015
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 511 SWILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
++I +GS D SL IW KG + GH + V +SF D+ VSG+ D+ I
Sbjct: 1349 NFIATGSRDMSLKIWQIDKGFLTQVLVGHENVVTCCC-ISF--DERLVVSGARDEKII-- 1403
Query: 688 VWNVPKNSVDCMI 726
VWNV + C +
Sbjct: 1404 VWNVQSGDMVCTV 1416
>U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated
protein 78, isoform a protein.
Length = 611
Score = 36.7 bits (81), Expect = 0.020
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Frame = +1
Query: 451 TNSTGLFNARRLGVSCSGHSSWILSGSYDNSLHIWSTK--GQHKLAIPG-HT-SPVKAVS 618
TNS A+ VS S + + +GS DNS+ +W+ H + I G H S V +V
Sbjct: 529 TNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVI 588
Query: 619 WVSFQGDQATFVSGSHDQTAILWVWNVP 702
W+ ++ T VS D + WNVP
Sbjct: 589 WL----NETTIVSAGQDSN--IKFWNVP 610
>AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein.
Length = 611
Score = 36.7 bits (81), Expect = 0.020
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Frame = +1
Query: 451 TNSTGLFNARRLGVSCSGHSSWILSGSYDNSLHIWSTK--GQHKLAIPG-HT-SPVKAVS 618
TNS A+ VS S + + +GS DNS+ +W+ H + I G H S V +V
Sbjct: 529 TNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVI 588
Query: 619 WVSFQGDQATFVSGSHDQTAILWVWNVP 702
W+ ++ T VS D + WNVP
Sbjct: 589 WL----NETTIVSAGQDSN--IKFWNVP 610
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 35.9 bits (79), Expect = 0.034
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 505 HSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQATF-VSGSHDQTA 678
H +++GS DN+L +W KG+ + GHT V W S + VSGS D+T
Sbjct: 263 HDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGV----WTSQISQCGRYIVSGSTDRTV 318
Query: 679 ILW 687
+W
Sbjct: 319 KVW 321
Score = 35.9 bits (79), Expect = 0.034
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 514 WILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
+I+SGS D ++ +WST G + GHTS V+ ++ + V+GS D T +W
Sbjct: 308 YIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAG-----SILVTGSRDTTLRVW 361
Score = 32.7 bits (71), Expect = 0.32
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 517 ILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVW 693
++SG YD ++ IW+ G+ + GH + V + + F+ +++ SGS D + +W +
Sbjct: 389 VVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYS---LLFESERSIVCSGSLDTSIRVWDF 445
Query: 694 NVPKNSVDCMITYRG 738
P+ +C+ +G
Sbjct: 446 TRPEGQ-ECVALLQG 459
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 35.9 bits (79), Expect = 0.034
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 505 HSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQATF-VSGSHDQTA 678
H +++GS DN+L +W KG+ + GHT V W S + VSGS D+T
Sbjct: 265 HDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGV----WTSQISQCGRYIVSGSTDRTV 320
Query: 679 ILW 687
+W
Sbjct: 321 KVW 323
Score = 35.9 bits (79), Expect = 0.034
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 514 WILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
+I+SGS D ++ +WST G + GHTS V+ ++ + V+GS D T +W
Sbjct: 310 YIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAG-----SILVTGSRDTTLRVW 363
Score = 32.7 bits (71), Expect = 0.32
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 517 ILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVW 693
++SG YD ++ IW+ G+ + GH + V + + F+ +++ SGS D + +W +
Sbjct: 391 VVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYS---LLFESERSIVCSGSLDTSIRVWDF 447
Query: 694 NVPKNSVDCMITYRG 738
P+ +C+ +G
Sbjct: 448 TRPEGQ-ECVALLQG 461
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 35.9 bits (79), Expect = 0.034
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 505 HSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQATF-VSGSHDQTA 678
H +++GS DN+L +W KG+ + GHT V W S + VSGS D+T
Sbjct: 265 HDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGV----WTSQISQCGRYIVSGSTDRTV 320
Query: 679 ILW 687
+W
Sbjct: 321 KVW 323
Score = 35.9 bits (79), Expect = 0.034
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 514 WILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
+I+SGS D ++ +WST G + GHTS V+ ++ + V+GS D T +W
Sbjct: 310 YIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAG-----SILVTGSRDTTLRVW 363
Score = 32.7 bits (71), Expect = 0.32
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 517 ILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVW 693
++SG YD ++ IW+ G+ + GH + V + + F+ +++ SGS D + +W +
Sbjct: 391 VVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYS---LLFESERSIVCSGSLDTSIRVWDF 447
Query: 694 NVPKNSVDCMITYRG 738
P+ +C+ +G
Sbjct: 448 TRPEGQ-ECVALLQG 461
>Z66515-12|CAC42333.1| 860|Caenorhabditis elegans Hypothetical
protein C05C10.6b protein.
Length = 860
Score = 35.5 bits (78), Expect = 0.045
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 10/84 (11%)
Frame = +1
Query: 466 LFNARRLGVSC---SGHSSWILSGSYDNSLHIW-------STKGQHKLAIPGHTSPVKAV 615
+FN + V C + ++ +LSGS+D+++ IW S+ + PGHT V A+
Sbjct: 112 IFNEHKQNVCCLHINEKATHMLSGSWDSNVIIWPITELNSSSFTFQTIVCPGHTLSVWAL 171
Query: 616 SWVSFQGDQATFVSGSHDQTAILW 687
+ SF T++S S D+T +W
Sbjct: 172 A--SFPDLPNTYLSASADKTIRMW 193
>Z48178-11|CAC42247.1| 860|Caenorhabditis elegans Hypothetical
protein C05C10.6b protein.
Length = 860
Score = 35.5 bits (78), Expect = 0.045
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 10/84 (11%)
Frame = +1
Query: 466 LFNARRLGVSC---SGHSSWILSGSYDNSLHIW-------STKGQHKLAIPGHTSPVKAV 615
+FN + V C + ++ +LSGS+D+++ IW S+ + PGHT V A+
Sbjct: 112 IFNEHKQNVCCLHINEKATHMLSGSWDSNVIIWPITELNSSSFTFQTIVCPGHTLSVWAL 171
Query: 616 SWVSFQGDQATFVSGSHDQTAILW 687
+ SF T++S S D+T +W
Sbjct: 172 A--SFPDLPNTYLSASADKTIRMW 193
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 35.1 bits (77), Expect = 0.060
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 487 GVSC-----SGHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATF 651
GV+C G +I+SG+ D+ + IW Q+K + + VS V F +
Sbjct: 187 GVNCVDYYHGGEKPYIISGADDHLVKIWDY--QNKTCVQTLDGHAQNVSSVCFHPELPLI 244
Query: 652 VSGSHDQTAILW 687
++GS D T LW
Sbjct: 245 ITGSEDSTVRLW 256
>Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical
protein F13D12.7 protein.
Length = 340
Score = 35.1 bits (77), Expect = 0.060
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 517 ILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
I++ S D + +W + GQ A GHT V ++S D TF+SG+ D +A LW
Sbjct: 157 IVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLS---LSPDFRTFISGACDASAKLW 211
Score = 31.1 bits (67), Expect = 0.98
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 737 GHDKGIECLSXSADGNRFAXGSWD 808
GHD + CL + DG GSWD
Sbjct: 310 GHDNRVSCLGVTEDGMAVCTGSWD 333
>X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein.
Length = 340
Score = 35.1 bits (77), Expect = 0.060
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 517 ILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
I++ S D + +W + GQ A GHT V ++S D TF+SG+ D +A LW
Sbjct: 157 IVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLS---LSPDFRTFISGACDASAKLW 211
Score = 31.1 bits (67), Expect = 0.98
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 737 GHDKGIECLSXSADGNRFAXGSWD 808
GHD + CL + DG GSWD
Sbjct: 310 GHDNRVSCLGVTEDGMAVCTGSWD 333
>AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeric G
protein beta subunit1 protein.
Length = 340
Score = 35.1 bits (77), Expect = 0.060
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 517 ILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
I++ S D + +W + GQ A GHT V ++S D TF+SG+ D +A LW
Sbjct: 157 IVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLS---LSPDFRTFISGACDASAKLW 211
Score = 31.1 bits (67), Expect = 0.98
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 737 GHDKGIECLSXSADGNRFAXGSWD 808
GHD + CL + DG GSWD
Sbjct: 310 GHDNRVSCLGVTEDGMAVCTGSWD 333
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 34.7 bits (76), Expect = 0.079
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
Frame = +1
Query: 517 ILSGSYDNSLHIWSTKGQHK---LAIP---GHTSPVKAVSW-VSFQGDQATFVSGSHDQT 675
++S SY LH W + + K A+P GH V+ V W S GD +S DQT
Sbjct: 361 VISSSYFGGLHCWKSTDEQKTFWTALPMTGGHVGEVRDVDWHRSDDGDSGFLMSVGQDQT 420
Query: 676 AILWVWN 696
++ N
Sbjct: 421 TRVFAKN 427
>U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell
lineage protein 23 protein.
Length = 665
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 487 GVSCSGHSS-WILSGSYDNSLHIWSTKGQH-KLAIPGHTSPVKAVSWVSFQGDQATFVSG 660
GV C + I+SG DN++ IW K + GHT V + Q D +SG
Sbjct: 224 GVYCLQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSV-----LCLQYDNRVIISG 278
Query: 661 SHDQTAILW 687
S D T +W
Sbjct: 279 SSDATVRVW 287
Score = 32.3 bits (70), Expect = 0.42
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 481 RLGVSCSGHSS-WILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQGDQATFV 654
R G++C + ++SGS DN++ +W G + GH V+ + + D+ V
Sbjct: 385 RRGIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRF-----DEKRIV 439
Query: 655 SGSHDQTAILW 687
SG++D +W
Sbjct: 440 SGAYDGKIKVW 450
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Frame = +1
Query: 517 ILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQG-------DQATFVSGSHDQT 675
I+SG+YD + +W Q L +S + S V G D VS SHD T
Sbjct: 438 IVSGAYDGKIKVWDL--QAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDT 495
Query: 676 AILW 687
++W
Sbjct: 496 ILIW 499
>AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein.
Length = 665
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 487 GVSCSGHSS-WILSGSYDNSLHIWSTKGQH-KLAIPGHTSPVKAVSWVSFQGDQATFVSG 660
GV C + I+SG DN++ IW K + GHT V + Q D +SG
Sbjct: 224 GVYCLQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSV-----LCLQYDNRVIISG 278
Query: 661 SHDQTAILW 687
S D T +W
Sbjct: 279 SSDATVRVW 287
Score = 32.3 bits (70), Expect = 0.42
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 481 RLGVSCSGHSS-WILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQGDQATFV 654
R G++C + ++SGS DN++ +W G + GH V+ + + D+ V
Sbjct: 385 RRGIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRF-----DEKRIV 439
Query: 655 SGSHDQTAILW 687
SG++D +W
Sbjct: 440 SGAYDGKIKVW 450
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Frame = +1
Query: 517 ILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQG-------DQATFVSGSHDQT 675
I+SG+YD + +W Q L +S + S V G D VS SHD T
Sbjct: 438 IVSGAYDGKIKVWDL--QAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDT 495
Query: 676 AILW 687
++W
Sbjct: 496 ILIW 499
>AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical
protein C18E3.5 protein.
Length = 331
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +1
Query: 499 SGHSSWILSGSYDNSLHIWSTKG--QHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQ 672
S S++ S YD + +W+ G ++ + GH A+ V F D + VS D+
Sbjct: 45 SSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKG---AIMEVKFNADSSHLVSAGTDK 101
Query: 673 TAILW 687
T +W
Sbjct: 102 TVRVW 106
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 514 WILSGSYDNSLHIWSTKGQHKLAI-PGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
WI+S S D ++ IW+ + ++ +AI GH V F + S S DQT +W
Sbjct: 109 WIISASDDQTVRIWNWQSRNSIAILTGHNHYVMC---AQFHPTEDLVASASLDQTVRVW 164
Score = 33.1 bits (72), Expect = 0.24
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +1
Query: 472 NARRLGVSCSGHSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQAT 648
+AR G+S W+L+ + + +W + L H PV+ + F DQ
Sbjct: 11 SARVKGISFHPTRPWVLTSLHSGVIQLWDYRMCVLLEKFDEHDGPVRG---ICFHHDQPI 67
Query: 649 FVSGSHDQTAILWVWNVPKNSVDCMITYRG 738
FVSG D + VWN + C+ T G
Sbjct: 68 FVSGGDDYK--IKVWNYKQKR--CIFTLLG 93
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 574 KLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPK 705
K + GH + V+WV+F VSGS D+ +W +N K
Sbjct: 200 KHVLEGHD---RGVNWVAFHHTNPILVSGSDDRQVKIWRYNETK 240
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +1
Query: 496 CSGHSSWI-LSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSHD 669
C H I +SG D + +W+ K + + + GH ++ F +S S D
Sbjct: 60 CFHHDQPIFVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTF---FHHKYPWIISASDD 116
Query: 670 QTAILWVWNVPKNSV 714
QT +W W +NS+
Sbjct: 117 QTVRIWNWQ-SRNSI 130
>Z80216-3|CAB02280.1| 373|Caenorhabditis elegans Hypothetical
protein F10G8.3 protein.
Length = 373
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +1
Query: 508 SSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
SS I D +W + H PVK W++ Q ++GS D+T W
Sbjct: 101 SSKIFIACADKEARLWDLASNQVAVVGTHDGPVKTCHWINGNNYQC-LMTGSFDKTLRFW 159
Query: 688 -VWNVPKNS 711
+ N+P +
Sbjct: 160 DMKNLPNQT 168
>AC025727-6|AAY55898.1| 558|Caenorhabditis elegans Hypothetical
protein Y73E7A.9 protein.
Length = 558
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 517 ILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAIL 684
+ SGS D ++ IW + + + GH V AV ++ GDQ V+G+ D+ L
Sbjct: 56 LASGSDDRNVKIWKSGREIHNLVTGHEGNVFAVEFLQNSGDQ-KLVTGAADRVVAL 110
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 31.9 bits (69), Expect = 0.56
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Frame = +1
Query: 478 RRLGVSCSGH-----SSWILSGSY-DNSLHIWST-KGQHKLAIPGHTSPVKAV--SWVSF 630
+RL V CS S +I + Y D S I T G+ + A+ GH V + S S
Sbjct: 2221 QRLTVQCSNFVTTTDSKFIFACGYPDYSFRIVDTDSGRVRQAVYGHGDVVTCIARSETSL 2280
Query: 631 QGDQATFVSGSHDQTAILWVWN 696
D V+GS D T +LW WN
Sbjct: 2281 FSD-CYVVTGSMDCTVVLWHWN 2301
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 31.9 bits (69), Expect = 0.56
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Frame = +1
Query: 478 RRLGVSCSGH-----SSWILSGSY-DNSLHIWST-KGQHKLAIPGHTSPVKAV--SWVSF 630
+RL V CS S +I + Y D S I T G+ + A+ GH V + S S
Sbjct: 2221 QRLTVQCSNFVTTTDSKFIFACGYPDYSFRIVDTDSGRVRQAVYGHGDVVTCIARSETSL 2280
Query: 631 QGDQATFVSGSHDQTAILWVWN 696
D V+GS D T +LW WN
Sbjct: 2281 FSD-CYVVTGSMDCTVVLWHWN 2301
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 31.9 bits (69), Expect = 0.56
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 523 SGSYDNSLHIWSTKGQH-KLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNV 699
+G+ D + IW K Q A PGHT+ V++ ++F + +GS D LW
Sbjct: 355 TGAADAVVKIWDLKNQTVAAAFPGHTAAVRS---IAFSENGYYLATGSEDGEVKLWDLRK 411
Query: 700 PKN 708
KN
Sbjct: 412 LKN 414
>U21321-1|AAG00051.1| 507|Caenorhabditis elegans Fizzy (cdc20
protein family) homologprotein 1 protein.
Length = 507
Score = 31.5 bits (68), Expect = 0.74
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1
Query: 478 RRLGVSCSGHSSW-ILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFV 654
R+ GV G+ S I++ S H+ S+ G GH V A+ W D+ V
Sbjct: 279 RKQGVMTCGYKSGDIVNHDVRISQHVVSSWGGDN----GHCRDVTALEW---SADENMCV 331
Query: 655 SGSHDQTAILW 687
SGS D+TA +W
Sbjct: 332 SGSSDRTAKIW 342
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 490 VSCSGHSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSH 666
V +++S S+D +L +WST G L + GH + + V D S +
Sbjct: 428 VRADAAGQYLVSASFDCTLKMWSTTGWQPLRQLQGHDTRILC---VDISPDGQWMCSSAF 484
Query: 667 DQTAILW 687
D+T LW
Sbjct: 485 DRTFKLW 491
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 517 ILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
+++GS DNS+ +W + ++ +P HTS V+ V VS S D T +W
Sbjct: 395 MITGSSDNSMKVWDLRMRRNTYTMPAHTS---VVTRVRADAAGQYLVSASFDCTLKMW 449
>Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical
protein ZK1307.6 protein.
Length = 702
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = +1
Query: 487 GVSCSGHSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGS 663
G+ S + SG DN L +W+ + + H + VKA++W VSG
Sbjct: 527 GLKWSPDKQLLASGGNDNQLLVWNLRRNEPIQTYTQHNAAVKALAWSPHH--HGLLVSGG 584
Query: 664 HDQTAILWVWN 696
L WN
Sbjct: 585 GTADRCLRFWN 595
>U53155-9|AAC48273.1| 328|Caenorhabditis elegans Seven tm receptor
protein 138 protein.
Length = 328
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 611 QYHGFPSRAIKLHLLVDLMIKQQYSGYGMYLKIL 712
QY GFPS I +L+ L++K+ Y +G Y ++
Sbjct: 8 QYVGFPSAQITNLILLILIVKKAYKMFGQYCYVM 41
>AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,
light intermediateprotein 1 protein.
Length = 643
Score = 30.7 bits (66), Expect = 1.3
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +1
Query: 460 TGLFNARRLGVSCSGHSSWILSGSYDNSLHIWSTKGQH-KLAIPGHTSPVKAVSWVSFQG 636
TG+ R GV H +S S+D ++ +WSTK + K + H V V+W
Sbjct: 487 TGIEFHRASGVVDFSHL--FISSSHDWTVKLWSTKDANLKFSFESHPDLVLDVAWSPVH- 543
Query: 637 DQATFVSGSHDQTAILWVWNVPKNSVDCMITYRGSRQG 750
A F S D ++VWN+ ++ + R +G
Sbjct: 544 -PAVF--ASIDADGNIFVWNLNEDVEGPVARLRAGAEG 578
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Frame = +1
Query: 499 SGHSSWILSGSYDNSLHIWST-----KGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGS 663
S + W++ DN + ++ + K A GH + A + + F DQ+ +SG
Sbjct: 457 SPNDKWVVGQCMDNRIVLFQLVDDKLRFSKKKAFRGHNAAGYACN-IDFSPDQSFLISGD 515
Query: 664 HDQTAILWVWNVPK 705
D +W W K
Sbjct: 516 ADGKLFIWDWRTHK 529
>Z48809-2|CAA88747.1| 406|Caenorhabditis elegans Hypothetical
protein T01E8.4 protein.
Length = 406
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 553 WSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATF-VSGSHDQTAILWVWNVPKNSVD 717
W T Q + PGH++ V +V + F+ + F +SGS D+T LW +N D
Sbjct: 91 WET--QTVITAPGHSATVDSV--MLFENNNKQFCLSGSRDRTIRLWSIENARNGED 142
>U88174-3|ABP57824.1| 1058|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform d protein.
Length = 1058
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 484 LGVSCS-GHSSWILSGSYDNSLHIWSTKGQH 573
LG C+ GH +++G D SL W G+H
Sbjct: 385 LGRECATGHQELVVTGHKDGSLKFWQETGEH 415
>U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform c protein.
Length = 1211
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 484 LGVSCS-GHSSWILSGSYDNSLHIWSTKGQH 573
LG C+ GH +++G D SL W G+H
Sbjct: 385 LGRECATGHQELVVTGHKDGSLKFWQETGEH 415
>U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform a protein.
Length = 1124
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 484 LGVSCS-GHSSWILSGSYDNSLHIWSTKGQH 573
LG C+ GH +++G D SL W G+H
Sbjct: 420 LGRECATGHQELVVTGHKDGSLKFWQETGEH 450
>AY997306-1|AAY44303.1| 1133|Caenorhabditis elegans TOM-1 isoform E
protein.
Length = 1133
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 484 LGVSCS-GHSSWILSGSYDNSLHIWSTKGQH 573
LG C+ GH +++G D SL W G+H
Sbjct: 420 LGRECATGHQELVVTGHKDGSLKFWQETGEH 450
>AY997305-1|AAY44302.1| 1128|Caenorhabditis elegans TOM-1 isoform D
protein.
Length = 1128
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 484 LGVSCS-GHSSWILSGSYDNSLHIWSTKGQH 573
LG C+ GH +++G D SL W G+H
Sbjct: 420 LGRECATGHQELVVTGHKDGSLKFWQETGEH 450
>AY912103-1|AAX89146.1| 1058|Caenorhabditis elegans tomosyn protein.
Length = 1058
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 484 LGVSCS-GHSSWILSGSYDNSLHIWSTKGQH 573
LG C+ GH +++G D SL W G+H
Sbjct: 385 LGRECATGHQELVVTGHKDGSLKFWQETGEH 415
>AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isoform
A protein.
Length = 1124
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 484 LGVSCS-GHSSWILSGSYDNSLHIWSTKGQH 573
LG C+ GH +++G D SL W G+H
Sbjct: 420 LGRECATGHQELVVTGHKDGSLKFWQETGEH 450
>Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical protein
T28F3.5 protein.
Length = 1679
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 511 SWILSGSYDNSLHIWSTKGQ-HKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
+W+ SGS L WS+ Q +L I +S ++ +S + +A G++ + + W
Sbjct: 1050 AWVASGSSKEPLDTWSSTVQVQELVIDDESSELRFIS--DLKELEARATEGANSCSVVAW 1107
Query: 688 VWNV 699
+ N+
Sbjct: 1108 LLNI 1111
>Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical
protein F52A8.2 protein.
Length = 356
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 725 SLTGGHDKGIECLSXSADGNRFAXGSWD 808
S+ GH+ I CL S DG SWD
Sbjct: 322 SVLYGHENRISCLRTSPDGTAVCSASWD 349
>AJ011523-1|CAB38019.1| 760|Caenorhabditis elegans CHE-2 protein
protein.
Length = 760
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +1
Query: 508 SSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHD 669
S I++G D +W GQ H P+ ++SW D F GSH+
Sbjct: 198 SDLIVTGGEDLKFKVWDGFGQILFNSSVHDYPITSISW---NTDGTLFAVGSHN 248
>AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeric G
protein beta subunit2 protein.
Length = 356
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 725 SLTGGHDKGIECLSXSADGNRFAXGSWD 808
S+ GH+ I CL S DG SWD
Sbjct: 322 SVLYGHENRISCLRTSPDGTAVCSASWD 349
>AF025464-8|AAB71019.1| 714|Caenorhabditis elegans Hypothetical
protein F53G2.1 protein.
Length = 714
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +1
Query: 490 VSCSGHSSWILSGSYDNSLHIWSTKGQHKL 579
+SC +++I +GSYDNS++ +K +K+
Sbjct: 6 ISCEKIATYIQNGSYDNSVYRLDSKSSNKI 35
>AC006635-2|AAK68383.1| 760|Caenorhabditis elegans Abnormal
chemotaxis protein 2 protein.
Length = 760
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +1
Query: 508 SSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHD 669
S I++G D +W GQ H P+ ++SW D F GSH+
Sbjct: 198 SDLIVTGGEDLKFKVWDGFGQILFNSSVHDYPITSISW---NTDGTLFAVGSHN 248
>Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical protein
F54D1.6 protein.
Length = 1423
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +1
Query: 442 VPCTNSTGLFNARRLGVSCSGHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSW 621
VPC FNA+ LG++ + S +D S +++ G + P + ++S
Sbjct: 1198 VPCLYDYYNFNAKLLGLNVKNEWNTFTSDRFDASRQ-YNSCGVINIEYPEYLMKTSSMSS 1256
Query: 622 VSFQGDQATF 651
QGD A F
Sbjct: 1257 AYLQGDVARF 1266
>U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical
protein F52C9.1a protein.
Length = 1336
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 589 GHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPKNSVDCMITYR 735
GH ++ ++ +S ++ +FVS S D+T LW + + C TY+
Sbjct: 1106 GHQEKIRKLAAIS---NENSFVSASSDKTVKLWSIKPELDEIGCQWTYQ 1151
>U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical
protein F52C9.1b protein.
Length = 1331
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 589 GHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPKNSVDCMITYR 735
GH ++ ++ +S ++ +FVS S D+T LW + + C TY+
Sbjct: 1106 GHQEKIRKLAAIS---NENSFVSASSDKTVKLWSIKPELDEIGCQWTYQ 1151
>Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical
protein ZK829.4 protein.
Length = 536
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 299 KETSPSFEKAVIFDFLVCGELLCASLAEHLQEKGVSTED 415
++ +PSF K V F F E++ LAE L+ +S +D
Sbjct: 37 EQVNPSFYKMVDFYFNKGAEVIAPKLAEELKSNSLSQKD 75
>U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical
protein C10H11.8 protein.
Length = 382
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 499 SGHSSWILSGSYDNSLHIWSTKGQHKLA-IPGHTSPVKAV 615
S +I +G DN + IW + K+A GH P+ A+
Sbjct: 334 SSEGRYIFTGGNDNQVKIWDVENNKKVAQWDGHIKPLTAM 373
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 737 GHDKGIECLSXSADGNRFAXGSWD 808
GH K + C+ S+DG FA G D
Sbjct: 101 GHKKAVNCIEFSSDGLLFATGGKD 124
>AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin
related protein 2 protein.
Length = 1335
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 517 ILSGSYDNSLHIWS-TKG-QHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 687
I++G+ + + IW +G K + GH+ + A+S + FVS S D LW
Sbjct: 42 IITGAENGHIIIWKLAEGLMPKQLMIGHSQKITAISQTTNTPTNTRFVSASADGRVCLW 100
>Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 589 GHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPKNSV 714
GH PV +V+ F D+ +S + D+T LW +N+V
Sbjct: 392 GHGGPVFSVN---FSPDRRLLISSAGDRTVRLWSMETQRNAV 430
>Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 589 GHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPKNSV 714
GH PV +V+ F D+ +S + D+T LW +N+V
Sbjct: 392 GHGGPVFSVN---FSPDRRLLISSAGDRTVRLWSMETQRNAV 430
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 514 WILSGSYDNSLHIWSTKGQHKL-AIPGHTSP-VKAVSWVSFQGDQATFVSGSHDQTAILW 687
++LSGS+D S+ +W+ + + L I H AV+ V+F ++ S D A ++
Sbjct: 614 YLLSGSHDGSIRMWNMEKRSCLQEISAHRKKNDSAVTSVAFHPSRSLIGSAGADSLAKVY 673
Query: 688 V 690
V
Sbjct: 674 V 674
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 514 WILSGSYDNSLHIWSTKGQHKL-AIPGHTSP-VKAVSWVSFQGDQATFVSGSHDQTAILW 687
++LSGS+D S+ +W+ + + L I H AV+ V+F ++ S D A ++
Sbjct: 614 YLLSGSHDGSIRMWNMEKRSCLQEISAHRKKNDSAVTSVAFHPSRSLIGSAGADSLAKVY 673
Query: 688 V 690
V
Sbjct: 674 V 674
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,744,034
Number of Sequences: 27780
Number of extensions: 399509
Number of successful extensions: 1067
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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