Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1136
         (800 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   2.7  
AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    25   2.7  
DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    24   4.8  
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        24   6.3  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        24   6.3  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        24   6.3  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        24   6.3  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    24   6.3  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    23   8.3  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 495 CNAVHLYSVLVGVVRYFDNYLKTIQPMCHCVIVIT-HLKKKNL 620
           CN  HLY ++V +     + + T++ +  C+   T  LK  +L
Sbjct: 178 CNNAHLYVMVVYIPPQLSSEISTLRSLHDCISSFTLRLKPSDL 220


>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -3

Query: 153 QSFLGETLGVGERVIVSR*FGLRQFFLQRINLFLHLRNSSL 31
           QSFLG T+      ++ R  G R   L  I    HL+   L
Sbjct: 54  QSFLGSTINGNSSELLKRWRGKRVLVLNSIGFVAHLQTVRL 94


>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 286 DCPCR*HAARSYTYGYSINNYK 351
           +CPC     + + YG  INN++
Sbjct: 239 ECPCDETLNKQFDYGKVINNFR 260


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 89 CASSSCNESIFFCICET 39
          C   SC+ES F   CET
Sbjct: 44 CGRCSCDESFFGPFCET 60


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 89 CASSSCNESIFFCICET 39
          C   SC+ES F   CET
Sbjct: 44 CGRCSCDESFFGPFCET 60


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 89 CASSSCNESIFFCICET 39
          C   SC+ES F   CET
Sbjct: 44 CGRCSCDESFFGPFCET 60


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 89 CASSSCNESIFFCICET 39
          C   SC+ES F   CET
Sbjct: 44 CGRCSCDESFFGPFCET 60


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 89  CASSSCNESIFFCICET 39
           C   SC+ES F   CET
Sbjct: 620 CGRCSCDESFFGPFCET 636


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 224 STWKQEACTKRCRVIIPIRRATARVG 301
           S W+    TKR RV +P + A   VG
Sbjct: 314 SMWQLSDGTKRARVRLPAKAAKQLVG 339


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 745,845
Number of Sequences: 2352
Number of extensions: 14791
Number of successful extensions: 28
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)