Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1136
(800 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X05276-1|CAA28888.1| 248|Homo sapiens protein ( Human mRNA for ... 34 0.69
M12127-1|AAA36774.1| 131|Homo sapiens protein ( Human cytoskele... 34 0.69
BT019634-1|AAV38440.1| 248|Homo sapiens tropomyosin 4 protein. 34 0.69
BC067225-1|AAH67225.1| 248|Homo sapiens tropomyosin 4 protein. 34 0.69
BC037576-1|AAH37576.1| 248|Homo sapiens tropomyosin 4 protein. 34 0.69
BC002827-1|AAH02827.1| 248|Homo sapiens tropomyosin 4 protein. 34 0.69
AK023385-1|BAB14554.1| 284|Homo sapiens protein ( Homo sapiens ... 34 0.69
X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein. 32 2.1
D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 prot... 32 2.1
BC117307-1|AAI17308.1| 758|Homo sapiens KIF6 protein protein. 32 2.8
AL590387-3|CAJ58479.1| 814|Homo sapiens kinesin family member 6... 32 2.8
AL590387-2|CAJ58478.1| 688|Homo sapiens kinesin family member 6... 32 2.8
AL161439-1|CAJ58477.1| 814|Homo sapiens kinesin family member 6... 32 2.8
AL160161-4|CAJ58476.1| 814|Homo sapiens kinesin family member 6... 32 2.8
AL160161-3|CAJ58475.1| 688|Homo sapiens kinesin family member 6... 32 2.8
AL136087-6|CAJ58473.1| 814|Homo sapiens kinesin family member 6... 32 2.8
AL136087-3|CAJ58472.1| 688|Homo sapiens kinesin family member 6... 32 2.8
AL035464-4|CAJ58470.1| 814|Homo sapiens kinesin family member 6... 32 2.8
AL035464-3|CAJ58469.1| 688|Homo sapiens kinesin family member 6... 32 2.8
AK131471-1|BAD18616.1| 814|Homo sapiens protein ( Homo sapiens ... 32 2.8
J05247-1|AAA51842.1| 44|Homo sapiens beta-tropomyosin protein. 31 6.4
AL833308-1|CAD89924.1| 878|Homo sapiens hypothetical protein pr... 30 8.5
AK024452-1|BAB15742.1| 1051|Homo sapiens FLJ00044 protein protein. 30 8.5
>X05276-1|CAA28888.1| 248|Homo sapiens protein ( Human mRNA for
fibroblast tropomyosin TM30 (pl). ).
Length = 248
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +1
Query: 22 ELRQRTVSQMQKKIDSLQEELAQAK 96
E +RTV++++K ID L+E+LAQAK
Sbjct: 204 EFAERTVAKLEKTIDDLEEKLAQAK 228
>M12127-1|AAA36774.1| 131|Homo sapiens protein ( Human cytoskeletal
tropomyosin isoform (3.0 kb) mRNA, 3' end. ).
Length = 131
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +1
Query: 22 ELRQRTVSQMQKKIDSLQEELAQAK 96
E +RTV++++K ID L+E+LAQAK
Sbjct: 87 EFAERTVAKLEKTIDDLEEKLAQAK 111
>BT019634-1|AAV38440.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +1
Query: 22 ELRQRTVSQMQKKIDSLQEELAQAK 96
E +RTV++++K ID L+E+LAQAK
Sbjct: 204 EFAERTVAKLEKTIDDLEEKLAQAK 228
>BC067225-1|AAH67225.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +1
Query: 22 ELRQRTVSQMQKKIDSLQEELAQAK 96
E +RTV++++K ID L+E+LAQAK
Sbjct: 204 EFAERTVAKLEKTIDDLEEKLAQAK 228
>BC037576-1|AAH37576.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +1
Query: 22 ELRQRTVSQMQKKIDSLQEELAQAK 96
E +RTV++++K ID L+E+LAQAK
Sbjct: 204 EFAERTVAKLEKTIDDLEEKLAQAK 228
>BC002827-1|AAH02827.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +1
Query: 22 ELRQRTVSQMQKKIDSLQEELAQAK 96
E +RTV++++K ID L+E+LAQAK
Sbjct: 204 EFAERTVAKLEKTIDDLEEKLAQAK 228
>AK023385-1|BAB14554.1| 284|Homo sapiens protein ( Homo sapiens
cDNA FLJ13323 fis, clone OVARC1001731, highly similar to
TROPOMYOSIN ALPHA CHAIN, FIBROBLAST ISOFORM F2. ).
Length = 284
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +1
Query: 22 ELRQRTVSQMQKKIDSLQEELAQAK 96
E +RTV++++K ID L+E+LAQAK
Sbjct: 240 EFAERTVAKLEKTIDDLEEKLAQAK 264
>X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein.
Length = 3259
Score = 32.3 bits (70), Expect = 2.1
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Frame = +1
Query: 22 ELRQRTVSQMQKKI-DSLQEE----LAQAKSARHNHTFADAERLAEERLMAGLSDKHTDI 186
E + +T Q+Q+K+ D+LQ E L+Q + RH + + E E + L D+ TD+
Sbjct: 2265 ESKAQTEVQLQQKVCDTLQGENKELLSQLEETRHLYHSSQNELAKLESELKSLKDQLTDL 2324
Query: 187 SNGPLQLGLENK*HLE 234
SN L+ E K +LE
Sbjct: 2325 SNS-LEKCKEQKGNLE 2339
>D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 protein.
Length = 3225
Score = 32.3 bits (70), Expect = 2.1
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Frame = +1
Query: 22 ELRQRTVSQMQKKI-DSLQEE----LAQAKSARHNHTFADAERLAEERLMAGLSDKHTDI 186
E + +T Q+Q+K+ D+LQ E L+Q + RH + + E E + L D+ TD+
Sbjct: 2231 ESKAQTEVQLQQKVCDTLQGENKELLSQLEETRHLYHSSQNELAKLESELKSLKDQLTDL 2290
Query: 187 SNGPLQLGLENK*HLE 234
SN L+ E K +LE
Sbjct: 2291 SNS-LEKCKEQKGNLE 2305
>BC117307-1|AAI17308.1| 758|Homo sapiens KIF6 protein protein.
Length = 758
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 19 DELRQRTV-SQMQKKIDSLQEELAQAKSARHNHTFADAERLAEERLMAG-LSDKHTD 183
+E+ R V ++QK+I L++ELA + +AE L E+L+ L D+ +D
Sbjct: 353 EEINPRLVIKRLQKEIQELKDELAMVTGEQRTEALTEAELLQLEKLITSFLEDQDSD 409
>AL590387-3|CAJ58479.1| 814|Homo sapiens kinesin family member 6
protein.
Length = 814
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 19 DELRQRTV-SQMQKKIDSLQEELAQAKSARHNHTFADAERLAEERLMAG-LSDKHTD 183
+E+ R V ++QK+I L++ELA + +AE L E+L+ L D+ +D
Sbjct: 353 EEINPRLVIKRLQKEIQELKDELAMVTGEQRTEALTEAELLQLEKLITSFLEDQDSD 409
>AL590387-2|CAJ58478.1| 688|Homo sapiens kinesin family member 6
protein.
Length = 688
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 19 DELRQRTV-SQMQKKIDSLQEELAQAKSARHNHTFADAERLAEERLMAG-LSDKHTD 183
+E+ R V ++QK+I L++ELA + +AE L E+L+ L D+ +D
Sbjct: 244 EEINPRLVIKRLQKEIQELKDELAMVTGEQRTEALTEAELLQLEKLITSFLEDQDSD 300
>AL161439-1|CAJ58477.1| 814|Homo sapiens kinesin family member 6
protein.
Length = 814
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 19 DELRQRTV-SQMQKKIDSLQEELAQAKSARHNHTFADAERLAEERLMAG-LSDKHTD 183
+E+ R V ++QK+I L++ELA + +AE L E+L+ L D+ +D
Sbjct: 353 EEINPRLVIKRLQKEIQELKDELAMVTGEQRTEALTEAELLQLEKLITSFLEDQDSD 409
>AL160161-4|CAJ58476.1| 814|Homo sapiens kinesin family member 6
protein.
Length = 814
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 19 DELRQRTV-SQMQKKIDSLQEELAQAKSARHNHTFADAERLAEERLMAG-LSDKHTD 183
+E+ R V ++QK+I L++ELA + +AE L E+L+ L D+ +D
Sbjct: 353 EEINPRLVIKRLQKEIQELKDELAMVTGEQRTEALTEAELLQLEKLITSFLEDQDSD 409
>AL160161-3|CAJ58475.1| 688|Homo sapiens kinesin family member 6
protein.
Length = 688
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 19 DELRQRTV-SQMQKKIDSLQEELAQAKSARHNHTFADAERLAEERLMAG-LSDKHTD 183
+E+ R V ++QK+I L++ELA + +AE L E+L+ L D+ +D
Sbjct: 244 EEINPRLVIKRLQKEIQELKDELAMVTGEQRTEALTEAELLQLEKLITSFLEDQDSD 300
>AL136087-6|CAJ58473.1| 814|Homo sapiens kinesin family member 6
protein.
Length = 814
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 19 DELRQRTV-SQMQKKIDSLQEELAQAKSARHNHTFADAERLAEERLMAG-LSDKHTD 183
+E+ R V ++QK+I L++ELA + +AE L E+L+ L D+ +D
Sbjct: 353 EEINPRLVIKRLQKEIQELKDELAMVTGEQRTEALTEAELLQLEKLITSFLEDQDSD 409
>AL136087-3|CAJ58472.1| 688|Homo sapiens kinesin family member 6
protein.
Length = 688
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 19 DELRQRTV-SQMQKKIDSLQEELAQAKSARHNHTFADAERLAEERLMAG-LSDKHTD 183
+E+ R V ++QK+I L++ELA + +AE L E+L+ L D+ +D
Sbjct: 244 EEINPRLVIKRLQKEIQELKDELAMVTGEQRTEALTEAELLQLEKLITSFLEDQDSD 300
>AL035464-4|CAJ58470.1| 814|Homo sapiens kinesin family member 6
protein.
Length = 814
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 19 DELRQRTV-SQMQKKIDSLQEELAQAKSARHNHTFADAERLAEERLMAG-LSDKHTD 183
+E+ R V ++QK+I L++ELA + +AE L E+L+ L D+ +D
Sbjct: 353 EEINPRLVIKRLQKEIQELKDELAMVTGEQRTEALTEAELLQLEKLITSFLEDQDSD 409
>AL035464-3|CAJ58469.1| 688|Homo sapiens kinesin family member 6
protein.
Length = 688
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 19 DELRQRTV-SQMQKKIDSLQEELAQAKSARHNHTFADAERLAEERLMAG-LSDKHTD 183
+E+ R V ++QK+I L++ELA + +AE L E+L+ L D+ +D
Sbjct: 244 EEINPRLVIKRLQKEIQELKDELAMVTGEQRTEALTEAELLQLEKLITSFLEDQDSD 300
>AK131471-1|BAD18616.1| 814|Homo sapiens protein ( Homo sapiens
cDNA FLJ16639 fis, clone TESTI4026207, weakly similar
to Kinesin-like protein KLP1. ).
Length = 814
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 19 DELRQRTV-SQMQKKIDSLQEELAQAKSARHNHTFADAERLAEERLMAG-LSDKHTD 183
+E+ R V ++QK+I L++ELA + +AE L E+L+ L D+ +D
Sbjct: 353 EEINPRLVIKRLQKEIQELKDELAMVTGEQRTEALTEAELLQLEKLITSFLEDQDSD 409
>J05247-1|AAA51842.1| 44|Homo sapiens beta-tropomyosin protein.
Length = 44
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 37 TVSQMQKKIDSLQEELAQAKS-ARHNHTFADAERLAEER 150
++ ++KKI SLQ+ +A+ A H ADAER A ER
Sbjct: 6 SIDAVKKKIQSLQQVADEAEERAEHLQREADAERQARER 44
>AL833308-1|CAD89924.1| 878|Homo sapiens hypothetical protein
protein.
Length = 878
Score = 30.3 bits (65), Expect = 8.5
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 31 QRTVSQMQKKIDSLQEELAQAKSARHNHTFADAE-RLAEERLMAGLSDKHTDISNGPLQL 207
+R V+ +Q++ +SLQEEL AK+A + A+ AE+R + H +++ QL
Sbjct: 348 ERQVAGLQQEKESLQEELKAAKAAAGSLPGLQAQLAQAEQRAQSLQEAAHQELNTLKFQL 407
Query: 208 GLE 216
E
Sbjct: 408 SAE 410
>AK024452-1|BAB15742.1| 1051|Homo sapiens FLJ00044 protein protein.
Length = 1051
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 37 TVSQMQKKIDSLQEELAQAKSARHNHTFADAERLAEERLMAG 162
T+SQM + D LQ+ + SA H A+RLA+E L+ G
Sbjct: 253 TLSQMNR--DQLQKFVQYLISAHHTEVLPTAQRLADEILLLG 292
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,594,033
Number of Sequences: 237096
Number of extensions: 1979072
Number of successful extensions: 3838
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3838
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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