Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1126
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    26   1.4  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   1.9  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   2.5  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    24   5.8  

>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
 Frame = -2

Query: 317 VVWYVRCTSQKHLSYINCIACEGWSDARAEALKRDRCIYMSFC---LAHSGQMMSCPSVM 147
           V+W   CT Q  L  +      GW + +        CIY+ FC   L+H+  +++ P++ 
Sbjct: 94  VMW---CTGQVLLK-LRQAGQGGWREVQQPPRLSRLCIYVVFCSALLSHNAFVLARPNLS 149

Query: 146 KPLPTSEV 123
            P    +V
Sbjct: 150 APASGEKV 157


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 141 GLHHRRTGHHLSRVRQAEAHVNTPVS 218
           GLHH   GHH +      AH+  P S
Sbjct: 347 GLHHHHPGHHAA----LHAHLGVPTS 368


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 66  HLVRRQTLAQRLLHLRAVQDLARRQGLHHRRTGHH 170
           HL+++Q   Q+  H +A Q   +    HH    HH
Sbjct: 636 HLLQQQQQQQQHQHHQAHQHQGQHHAQHHSNGTHH 670


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 16/67 (23%), Positives = 25/67 (37%)
 Frame = -2

Query: 326 RLPVVWYVRCTSQKHLSYINCIACEGWSDARAEALKRDRCIYMSFCLAHSGQMMSCPSVM 147
           +L V W V C+ ++    + C  C        E   +DR      C     ++  CP+ M
Sbjct: 311 KLKVGWCV-CSLREATVQVKCFKCWKLGHKGFECTGQDRSKLCIKCGQEGHKIRECPNAM 369

Query: 146 KPLPTSE 126
             L   E
Sbjct: 370 TCLDCRE 376


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,928
Number of Sequences: 2352
Number of extensions: 12057
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)