Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1125
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0945 + 9351915-9351929,9352221-9352386,9352903-9353024,935... 75 5e-14
10_08_1007 - 22210263-22210400,22210506-22210547,22210626-222107... 72 4e-13
10_08_0871 - 21181798-21181917,21182024-21182065,21182162-211821... 71 1e-12
01_06_0729 - 31546464-31546574,31546653-31546694,31546795-315468... 71 1e-12
06_03_0633 + 22960514-22960619,22961402-22961503,22961850-22961908 54 1e-07
03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798 44 2e-04
01_06_0153 - 27044553-27044669,27044842-27044964,27045066-270451... 42 7e-04
02_05_0164 + 26405052-26405208,26405304-26405473,26406278-264063... 37 0.015
06_03_0634 + 22963211-22963270,22963532-22963628,22964604-229647... 36 0.045
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 33 0.18
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018... 33 0.24
02_05_0163 + 26400486-26400621,26401477-26401646,26402623-264027... 32 0.42
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 31 0.74
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 30 1.7
04_04_1434 - 33568258-33569415 29 3.0
02_03_0201 + 16302797-16302799,16303949-16304084,16304163-163042... 29 3.0
08_02_1485 - 27466761-27467753 29 3.9
03_01_0234 + 1840943-1841222,1841325-1841436,1841593-1841971 24 4.9
10_07_0011 + 11788818-11789590,11789999-11790098,11790144-117903... 29 5.2
07_01_1128 - 10458441-10458524,10458898-10458965,10462736-104628... 29 5.2
02_04_0448 - 23001579-23001683,23001783-23002382,23002479-230026... 29 5.2
02_01_0310 + 2070492-2070506,2072789-2072830,2072978-2073199,207... 29 5.2
09_02_0420 + 9051728-9051754,9053244-9053530,9055263-9055500,905... 28 6.9
12_02_0688 + 22131745-22131895,22132133-22132206,22132841-221330... 28 9.1
04_03_0823 - 20073972-20074343,20074432-20074657,20074753-20075126 28 9.1
>12_01_0945 +
9351915-9351929,9352221-9352386,9352903-9353024,
9353098-9353214,9356997-9357077,9357204-9357272,
9357727-9357790,9357988-9358067,9358164-9358247,
9358418-9358502,9359658-9359743,9359924-9360045,
9360841-9360901,9360981-9361166,9363622-9363723,
9363803-9363844,9363949-9364086
Length = 539
Score = 75.4 bits (177), Expect = 5e-14
Identities = 45/126 (35%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Frame = +1
Query: 133 QATLPLLRRTMSSQEPDVLFEALNNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKS 312
+A ++++ MS VL EA + LNRPK LN+L+++M++ L +E+
Sbjct: 128 EAAKDIIKQAMSQ----VLVEANGVTRTLVLNRPKQLNALSSAMITCFLRCFTAYEEDDG 183
Query: 313 --LVIIKGAGEKAFCAGGDVKAAIDKIE------GPRFFHTEYNVNFLIGNYKIPYIAFI 468
L+I+KG G +AFCAGGDV A + I G FF E+ +N++I Y P ++ +
Sbjct: 184 VKLLIVKGKG-RAFCAGGDVAAVVRSINNDSWKYGAHFFRNEFLLNYIIATYSKPQVSLL 242
Query: 469 NGITMG 486
GI MG
Sbjct: 243 TGIVMG 248
Score = 62.5 bits (145), Expect = 3e-10
Identities = 32/76 (42%), Positives = 42/76 (55%)
Frame = +2
Query: 485 GGGLGLSVHGRYRVATEKTLIAMPETKIGLFPDVGGXXXXXXXXXXXWDCT*G*LVTDXR 664
GGG G+S+HGR+RV T+ T+ AMPET +GLFPD+G + G
Sbjct: 248 GGGAGVSIHGRFRVVTDSTVFAMPETALGLFPDIGASYFLSRLLGFYGEYV-GLTGVRLD 306
Query: 665 *XTL*KLGIATHFVPS 712
+ G+ATHFVPS
Sbjct: 307 AAEMLACGLATHFVPS 322
>10_08_1007 -
22210263-22210400,22210506-22210547,22210626-22210727,
22212239-22212337,22212413-22212473,22213311-22213432,
22217700-22217786,22217958-22218041,22218141-22218220,
22218404-22218467,22218904-22218972,22219099-22219179,
22219626-22219694,22220108-22220140
Length = 376
Score = 72.1 bits (169), Expect = 4e-13
Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 8/109 (7%)
Frame = +1
Query: 184 VLFEALNNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKS--LVIIKGAGEKAFCAG 357
VL EA + +NRPK LN+L+++M++ L +E+ + L+I+KG G +AFCAG
Sbjct: 35 VLVEANGVTRTLLMNRPKQLNALSSAMITGFLRCFTAYEEDEGVKLLIVKGKG-RAFCAG 93
Query: 358 GDVKAAIDKIE------GPRFFHTEYNVNFLIGNYKIPYIAFINGITMG 486
GDV A + I FF E+ +N++I Y P ++ + GI MG
Sbjct: 94 GDVAAVVRSINNDSWKYSAHFFRNEFLLNYIIATYNKPQVSLLTGIVMG 142
Score = 61.7 bits (143), Expect = 6e-10
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = +2
Query: 485 GGGLGLSVHGRYRVATEKTLIAMPETKIGLFPDVG 589
GGG G+S+HGR+RV TE T+ AMPET +GLFPD+G
Sbjct: 142 GGGAGVSIHGRFRVVTESTVFAMPETALGLFPDIG 176
>10_08_0871 -
21181798-21181917,21182024-21182065,21182162-21182191,
21182227-21182328,21182414-21182512,21182824-21182884,
21183447-21183568,21183673-21183758,21183880-21183964,
21184125-21184208,21184292-21184371,21184722-21184785,
21184859-21184927,21185263-21185343,21185438-21185578
Length = 421
Score = 70.9 bits (166), Expect = 1e-12
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Frame = +1
Query: 181 DVLFEALNNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKSL--VIIKGAGEKAFCA 354
+VL E +A LNRP LN+L T+M ++L WE + + V++KG+G +AFCA
Sbjct: 47 EVLVEGKASARAAVLNRPGHLNALTTTMGARLNKFYMSWEDNPDIGFVMMKGSG-RAFCA 105
Query: 355 GGDVKAAIDKI------EGPRFFHTEYNVNFLIGNYKIPYIAFINGITMGRRSWTLSPWQ 516
GGDV I E FF T Y+ +++G Y P++A ++G+TMG P
Sbjct: 106 GGDVVRLHQLISEGKLDECKDFFKTLYSFIYVLGTYLKPHVAILDGVTMGGGGGVSIPGT 165
Query: 517 IQSSNREDINSHARD*DRTIPRCWWIISFYLVYKL-ILGLYLRLTGDRLXVKXLVKAG 687
+ + + P SFYL + +G YL LTG++L ++ G
Sbjct: 166 FRIVTDRTVFATPEVHIGFHPDA--AASFYLSHLTGHVGEYLALTGEKLNGVDMIALG 221
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2
Query: 443 IKSHISHL*MESQWGGGLGLSVHGRYRVATEKTLIAMPETKIGLFPD 583
+K H++ L + GGG G+S+ G +R+ T++T+ A PE IG PD
Sbjct: 142 LKPHVAILDGVTMGGGG-GVSIPGTFRIVTDRTVFATPEVHIGFHPD 187
>01_06_0729 -
31546464-31546574,31546653-31546694,31546795-31546896,
31547148-31547246,31547522-31547582,31547659-31547807,
31547963-31548048,31548249-31548333,31548642-31548725,
31548820-31548893,31549035-31549095,31549546-31549614,
31549712-31549795,31549893-31549937
Length = 383
Score = 70.5 bits (165), Expect = 1e-12
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
Frame = +1
Query: 145 PLLRRTMSSQEPDVLFEALNNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSK--SLV 318
P ++ ++ + VL + A + LNRP+ LN ++ +V L L+ WEK + LV
Sbjct: 4 PEQQQQQANPDEVVLGQETGGARVAILNRPRQLNVISDRVVYLLAQFLESWEKDEDAKLV 63
Query: 319 IIKGAGEKAFCAGGDVKAAIDKIEGPRFFHTEYNVNFL---IGNYKIPYIAFINGITMGR 489
I KGAG +AF AGGD+K + Y + +L I YK +A +NG+ MG
Sbjct: 64 IFKGAG-RAFSAGGDLKMFYEGKSDDSCLEVVYRMYWLCYHIHTYKKTAVALVNGLVMGG 122
Query: 490 RSWTLSPWQIQSSNREDINSHARD*DRTIPRCWWIISFYLVYKLI---LGLYLRLTGDRL 660
+ ++P + + + + C SF ++ + LG YL LTG RL
Sbjct: 123 GAAMVAPLKFAVVTEKTVFATPEASVGLHTDC----SFSYIHSRLPGYLGEYLALTGARL 178
Query: 661 XVKXLVKAG 687
K ++ AG
Sbjct: 179 NAKEMIAAG 187
>06_03_0633 + 22960514-22960619,22961402-22961503,22961850-22961908
Length = 88
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Frame = +1
Query: 202 NNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKSL--VIIKGAGEKAFCAGGDVK 369
N ++TL+RPKALN++N M + L EWE + S+ V+++ + +AF AGGDVK
Sbjct: 17 NGVAVITLDRPKALNAMNLEMDLRYKAFLDEWETNPSVKCVLVESSSPRAFSAGGDVK 74
>03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798
Length = 268
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +1
Query: 202 NNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKSL--VIIKGAGEKAFCAGGDVKAA 375
+ +VT+NRPKALN+L M+ L + + + V++ G G +AFC+G D+ AA
Sbjct: 21 SRVAVVTINRPKALNALTRPMMVSLAAAFRRLDADDGVAAVVLAGRG-RAFCSGVDLTAA 79
Query: 376 IDKIEG 393
+ +G
Sbjct: 80 EEVFKG 85
>01_06_0153 -
27044553-27044669,27044842-27044964,27045066-27045161,
27045323-27045370,27046360-27046458,27046554-27046592,
27047032-27047133,27047225-27047347,27047535-27047783
Length = 331
Score = 41.5 bits (93), Expect = 7e-04
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Frame = +1
Query: 181 DVLFEALNNAGI--VTLNRPKALNSLNTSMVSKLLPQLQEWEKSKSL--VIIKGAGEKAF 348
D+L++ GI +T+NRP N+ V +L+ ++ S+ +I+ G G ++F
Sbjct: 70 DILYDKAVGEGIAKITINRPDRRNAFRPLTVKELMRAFEDARDDSSIGVIILTGKGTQSF 129
Query: 349 CAGGDVKAAIDKIEGPRFFHTEYNVNFL-----IGNYKIPYIAFINGITMG 486
C+GGD A+ +G F + +N L I P IA + G +G
Sbjct: 130 CSGGD--QALRDADGYVDFDSFGRLNVLDLQVQIRRLPKPVIAMVAGYAVG 178
>02_05_0164 +
26405052-26405208,26405304-26405473,26406278-26406352,
26406570-26406660,26406768-26406848,26407192-26407353,
26407425-26407501,26407670-26407846
Length = 329
Score = 37.1 bits (82), Expect = 0.015
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Frame = +1
Query: 163 MSSQEPDVLFEALN--NAGIVT--LNRPKALNSLNTSMVSKLLPQLQEW--EKSKSLVII 324
++ QEP V + L+ ++GIV L RP+A N++ M+ L +++ + + +V++
Sbjct: 36 LAQQEP-VRLQKLSAPDSGIVEMRLERPEARNAIGREMLQGLRSAIEKVKADATAKVVLL 94
Query: 325 KGAGEKAFCAGGDVK--AAIDKIEGPRFFHTEYNVNFLIGNYKIPYIAFINGITMG 486
+ K FCAG D+K + E F ++ + IP IA + G G
Sbjct: 95 ASSVPKVFCAGADLKERRLMSPCEVREFVNSLRSTFLSFEALSIPTIAIVEGAAFG 150
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 482 WGGGLGLSVHGRYRVATEKTLIAMPETKIGLFP 580
+GGGL L++ R+ E ++PET + + P
Sbjct: 149 FGGGLELALSCDLRICGENATFSLPETGLAIIP 181
>06_03_0634 +
22963211-22963270,22963532-22963628,22964604-22964733,
22965132-22965310,22965456-22965583,22965698-22965769,
22966984-22967082
Length = 254
Score = 35.5 bits (78), Expect = 0.045
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +2
Query: 524 VATEKTLIAMPETKIGLFPDVG 589
+ ++TL+AMPE IGLFPDVG
Sbjct: 17 ITEKRTLLAMPENGIGLFPDVG 38
>05_04_0012 +
17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 485 GGGLGLSVHGRYRVATEKTLIAMPETKIGLFPDVGG 592
GGGL L + RV+T + +PE ++G+ P +GG
Sbjct: 114 GGGLELVMVCHARVSTSSAQLGLPELQLGIIPGLGG 149
>02_02_0418 +
10000744-10000840,10000952-10001023,10001786-10001848,
10001952-10002008,10002159-10002226,10002327-10002408,
10002517-10002572,10002934-10003236,10003638-10003724,
10004454-10004628,10004813-10004934,10005171-10005334,
10006201-10006455,10006979-10007100,10007220-10007341,
10007452-10007600,10007649-10007652
Length = 665
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 485 GGGLGLSVHGRYRVATEKTLIAMPETKIGLFPDVGG 592
GGGL L++ R++T + + +PE +G+ P GG
Sbjct: 112 GGGLELTMGCHARISTPEAQLGLPELTLGIIPGFGG 147
>02_05_0163 +
26400486-26400621,26401477-26401646,26402623-26402713,
26402822-26402873,26403462-26403565,26403648-26403724,
26403890-26404069
Length = 269
Score = 32.3 bits (70), Expect = 0.42
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 485 GGGLGLSVHGRYRVATEKTLIAMPETKIGLFPDVGG 592
GGGL L++ R+ E + +PET + + P GG
Sbjct: 118 GGGLELALSCDLRICGENATLGLPETGLAIIPGAGG 153
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 223 LNRPKALNSLNTSMVSKLLPQLQEWEKSKSL--VIIKGAGEKAFCAGGDVKA 372
L RP+ N++N + L +++ E ++ V++ + FCAG D+KA
Sbjct: 52 LERPEVKNAINWEAMRLLRGVVEKVEADDTVKVVLVTSSVPGVFCAGADLKA 103
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 31.5 bits (68), Expect = 0.74
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 485 GGGLGLSVHGRYRVATEKTLIAMPETKIGLFPDVGG 592
GGGL +++ R++T + +PE ++G+ P GG
Sbjct: 117 GGGLEVAMACHARISTPTAQLGLPELQLGVIPGFGG 152
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 485 GGGLGLSVHGRYRVATEKTLIAMPETKIGLFPDVGG 592
GGGL +S+ + R++ + +PE ++G+ P GG
Sbjct: 113 GGGLEISMVCQARISIPTAQLGLPELQLGVIPAFGG 148
>04_04_1434 - 33568258-33569415
Length = 385
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 142 LPLLRRTMSSQEPDVLF-EALNNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKSLV 318
L L TM ++ + L AL T+ R L S+ + LP+L EW K+ +
Sbjct: 267 LKLNEETMEWEKMESLDGRALFTGTYTTMMRKTKLKSMQNKV---FLPRLYEWPKTIHVD 323
Query: 319 IIKGAGEKAFCAGGDVKAAIDKI 387
++ GE AF + +I+KI
Sbjct: 324 LVIRDGEPAFIPKSHSQYSIEKI 346
>02_03_0201 +
16302797-16302799,16303949-16304084,16304163-16304250,
16305531-16305683,16306647-16306809,16306906-16307090,
16307164-16307337,16308055-16308200,16308369-16308492,
16308608-16308788,16309302-16309371,16310155-16310196,
16310276-16310394,16310474-16310672,16311442-16311573,
16312435-16312538,16312641-16312820,16314000-16314090,
16314100-16314139,16314225-16314364,16314500-16314660,
16314897-16315020,16315104-16315255
Length = 968
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/71 (25%), Positives = 36/71 (50%)
Frame = +1
Query: 85 ILKAYSLQMYSLIKLKQATLPLLRRTMSSQEPDVLFEALNNAGIVTLNRPKALNSLNTSM 264
IL++ S + I+++ LP++RR ++S DV E L +T P +++ S+
Sbjct: 563 ILESVSSLPHLFIQIEPTLLPIMRRMLTSDGQDVYEEVLEIVSYMTFFSP-SISLDMWSL 621
Query: 265 VSKLLPQLQEW 297
++ L +W
Sbjct: 622 WPLMMEALNDW 632
>08_02_1485 - 27466761-27467753
Length = 330
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -1
Query: 594 DPPTSGNSPILVSGMAINVFSVAT---LYLPWTESPRPPP 484
D P S P+L + ++ S+AT LYLP SP PPP
Sbjct: 37 DAPPSATGPVLSRDVPLDA-SLATSLRLYLPNPASPPPPP 75
>03_01_0234 + 1840943-1841222,1841325-1841436,1841593-1841971
Length = 256
Score = 23.8 bits (49), Expect(2) = 4.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 615 VNEVKRNDPPTSGNSPI 565
VNE+ +DPP G PI
Sbjct: 111 VNEITPSDPPYYGRGPI 127
Score = 23.4 bits (48), Expect(2) = 4.9
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 576 NSPILVSGMAINVFSVATLYLPWTESPRPPPH 481
N+P LVS + F A + +SP+P H
Sbjct: 148 NNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCH 179
>10_07_0011 +
11788818-11789590,11789999-11790098,11790144-11790380,
11790683-11790754
Length = 393
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -1
Query: 600 RNDPPTSGNSPILVSGMAINVFSVATLYLPWTESPRPPPHCDSIY-KCDIWD 448
R PP P+ ++G+ + F A YLP + R HCD I+ K D D
Sbjct: 43 RCPPPRPDLLPLSLAGIFFSGFYFAHEYLPGFFARRGHHHCDRIFPKLDYLD 94
>07_01_1128 -
10458441-10458524,10458898-10458965,10462736-10462864,
10462938-10463051,10463114-10463303,10463378-10463560
Length = 255
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 148 LLRRTMSSQEPDVLFEALNNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKS 312
++ R +E +L +ALN A I +NR N T+ + KL+P L E ++S
Sbjct: 36 VINRQKEDEEVCLLKKALNQA-IRIVNRIHLRNEAKTATLEKLVPHLGTLEATRS 89
>02_04_0448 -
23001579-23001683,23001783-23002382,23002479-23002628,
23002788-23003015,23003188-23003302,23003392-23004659,
23006621-23006692
Length = 845
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -2
Query: 395 GPSILSMAAFTSPPAQKAFSPAPLIITSDFDFSHS*SCGNNF 270
G S+++ A +PPA AF PAP I + + D+S + G+ F
Sbjct: 301 GKSVMTSATPPTPPAAPAFRPAPPIPSLN-DWSQPPARGSTF 341
>02_01_0310 +
2070492-2070506,2072789-2072830,2072978-2073199,
2073365-2073432,2073513-2073541,2073750-2073841,
2073915-2074124,2074559-2074675,2074773-2074826,
2074920-2075036,2075134-2075230,2075344-2075369
Length = 362
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = -2
Query: 488 LPIVIPFINAIYGIL*FPIKKLTLYSVWKNLGPSILSMAAFTSPPAQKAFSPAPLIITSD 309
L I + ++ YG + FP+ L + + + LG + +A FT P S L++ S
Sbjct: 82 LAIFLNYMTQRYGWV-FPLSMLGIIPLAERLGFATEQLALFTGPKG-SILSNLLLVLGSA 139
Query: 308 FDFSHS*SCGNNFDT 264
F FS +CG T
Sbjct: 140 F-FSGGLACGKTMQT 153
>09_02_0420 +
9051728-9051754,9053244-9053530,9055263-9055500,
9057010-9057204,9058075-9058339,9058520-9058827
Length = 439
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 264 GVKIITTTSRMGEIKVAGYN*GCWRKSFLCWW*CES 371
G +I+TT V G GC R S+ WW E+
Sbjct: 75 GSRIVTTAGAPEPSHVDGVEDGCSRASYYRWWYAEN 110
>12_02_0688 +
22131745-22131895,22132133-22132206,22132841-22133035,
22133124-22133171,22133573-22133587
Length = 160
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = -1
Query: 522 LYLPWTESPRPPPHCDSIYKC--DIWDF--IVSNQEINI 418
L LP R P H D+I KC D WD I+S+++I +
Sbjct: 100 LLLPPQRHNRIPMHMDAIMKCKIDDWDIIHIISHRKIGV 138
>04_03_0823 - 20073972-20074343,20074432-20074657,20074753-20075126
Length = 323
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 355 GGDVKAAIDKIEGPRFFHTEYNVNFLIGNYKIPYI 459
G V+ A++ P F E ++NFL+ +Y IPY+
Sbjct: 147 GKIVETAMNTTLDPPFNPYENSLNFLLASYIIPYV 181
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,824,612
Number of Sequences: 37544
Number of extensions: 395182
Number of successful extensions: 1049
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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