Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1123
         (368 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RCH0 Cluster: Putative uncharacterized protein PY0581...    35   0.41 
UniRef50_Q8ILJ8 Cluster: Putative uncharacterized protein; n=1; ...    34   0.95 
UniRef50_A0DJ74 Cluster: Chromosome undetermined scaffold_52, wh...    31   5.1  
UniRef50_Q13129 Cluster: Zinc finger protein Rlf; n=27; Tetrapod...    31   5.1  
UniRef50_Q8IEL4 Cluster: Putative uncharacterized protein MAL13P...    31   6.7  
UniRef50_UPI0000F1EFD2 Cluster: PREDICTED: hypothetical protein;...    31   8.9  
UniRef50_UPI00006CC977 Cluster: ABC transporter family protein; ...    31   8.9  
UniRef50_Q05FQ2 Cluster: Putative uncharacterized protein; n=1; ...    31   8.9  
UniRef50_Q8IK70 Cluster: Putative uncharacterized protein; n=1; ...    31   8.9  
UniRef50_Q5CTQ9 Cluster: Putative uncharacterized protein; n=2; ...    31   8.9  
UniRef50_Q4UFF0 Cluster: Putative uncharacterized protein; n=2; ...    31   8.9  

>UniRef50_Q7RCH0 Cluster: Putative uncharacterized protein PY05812;
           n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05812 - Plasmodium yoelii yoelii
          Length = 667

 Score = 35.1 bits (77), Expect = 0.41
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -2

Query: 292 LKYIYSKFNKKYQCRRDTNKRKYCLITSLVKHIAFSKCNSQNISRE 155
           L YIY    K+YQC +D  +    L   L K I + K N +NI  E
Sbjct: 376 LSYIYEHELKRYQCLKDERRNLEFLNICLYKDIKYKKENIKNIKNE 421


>UniRef50_Q8ILJ8 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1431

 Score = 33.9 bits (74), Expect = 0.95
 Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = +3

Query: 183 LLKAMCLTNDVIKQYFLLFVSRLHW--YFLLNLL*MYFKCIILNNY*K*LYSNFYVQIKK 356
           LLK +C +NDV K+ FL       W  YF L L+ +YF              NFY    K
Sbjct: 836 LLKNICYSNDVEKKRFLFLFKMNKWLLYFFLYLMNIYFS-----------KDNFYTTTTK 884

Query: 357 KKK 365
           KKK
Sbjct: 885 KKK 887


>UniRef50_A0DJ74 Cluster: Chromosome undetermined scaffold_52, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_52, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1841

 Score = 31.5 bits (68), Expect = 5.1
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = -2

Query: 319  FQ*LFKIIHL--KYIYSKFNKKYQCRRDTNKRKYCLITSLVKHIA 191
            F  L K+ H+  K+I  +FN  ++C+  +++ KY   TS+  ++A
Sbjct: 979  FNTLTKLKHMAGKFIKYRFNYNFECKEFSSQLKYTFFTSISSYVA 1023


>UniRef50_Q13129 Cluster: Zinc finger protein Rlf; n=27;
            Tetrapoda|Rep: Zinc finger protein Rlf - Homo sapiens
            (Human)
          Length = 1914

 Score = 31.5 bits (68), Expect = 5.1
 Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = -2

Query: 295  HLKYIYSKFNKKYQCRRDTNKRKYCLITSLVKHI-AFSKCNSQNISRERSNKRSKMSLV 122
            +L YI +K++K + C   T    +  +  L++H     + N + +  E+   R+K  LV
Sbjct: 1298 NLCYILNKYHKPFHCIHKTCNSSFTNLKGLIRHYRTVHQYNKEQLCLEKDKARTKRELV 1356


>UniRef50_Q8IEL4 Cluster: Putative uncharacterized protein
           MAL13P1.48; n=2; Plasmodium|Rep: Putative
           uncharacterized protein MAL13P1.48 - Plasmodium
           falciparum (isolate 3D7)
          Length = 999

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
 Frame = -2

Query: 331 EYNHFQ*LFKIIHLKY---IYSKFNKKYQCRRDT---NKRKYCLITSLVKHIAF--SKCN 176
           E NHF  L+K I+L +    YS   K+Y+   D    N   + L+  ++    F  +  N
Sbjct: 272 EKNHFSLLYKYINLSFDTDTYSLDQKEYEGNYDVTNINVNNFLLLLKILSPSFFIWTATN 331

Query: 175 SQNISRERSNKRSKMSLVLEK*R*D*ITFKNY 80
           ++   +E+ NK  K   V +      IT +NY
Sbjct: 332 TKFKQKEKKNKYEKNDTVTQNSNNTEITKQNY 363


>UniRef50_UPI0000F1EFD2 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 285

 Score = 30.7 bits (66), Expect = 8.9
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -2

Query: 247 RDTNKRKYCLITSLVKHIAFSKCNSQNISRERSNKRSKMSLV 122
           R TN R+Y +IT L +HI  ++  ++ +S ER+   S   L+
Sbjct: 192 RHTNNRRYVIITPLQEHIKITELTAE-LSDERNTAESTSQLL 232


>UniRef50_UPI00006CC977 Cluster: ABC transporter family protein;
           n=1; Tetrahymena thermophila SB210|Rep: ABC transporter
           family protein - Tetrahymena thermophila SB210
          Length = 1292

 Score = 30.7 bits (66), Expect = 8.9
 Identities = 16/57 (28%), Positives = 30/57 (52%)
 Frame = -2

Query: 295 HLKYIYSKFNKKYQCRRDTNKRKYCLITSLVKHIAFSKCNSQNISRERSNKRSKMSL 125
           H+++ + KF     CR      +Y +     K ++FSK NS+ +  ++ N+ S+ SL
Sbjct: 152 HVQFEWIKFRWNALCRTTL---QYLVYKKSQKVLSFSKANSEVVDEKQQNEESEQSL 205


>UniRef50_Q05FQ2 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Carsonella ruddii PV|Rep: Putative
           uncharacterized protein - Carsonella ruddii (strain PV)
          Length = 405

 Score = 30.7 bits (66), Expect = 8.9
 Identities = 13/50 (26%), Positives = 28/50 (56%)
 Frame = +3

Query: 213 VIKQYFLLFVSRLHWYFLLNLL*MYFKCIILNNY*K*LYSNFYVQIKKKK 362
           ++  +F +   ++   +   L+ +YFK  IL    K LY N ++++K+K+
Sbjct: 48  ILNFFFKIIYFKIKKKYFFILITIYFKNFILKKKKKILYKNIFIKLKRKQ 97


>UniRef50_Q8IK70 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 944

 Score = 30.7 bits (66), Expect = 8.9
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -2

Query: 310 LFKIIHLKYIYSKFNKKYQCRRDTNKRKYCLITSLVKHIAFSKCNSQNI 164
           L + + L YI     KKY   R  N R   +++   K+  F  CN+ NI
Sbjct: 7   LIRCLILFYICRIIRKKYSVLRTCNVRNSRILSGPRKNFFFGSCNTNNI 55


>UniRef50_Q5CTQ9 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium parvum Iowa II
          Length = 184

 Score = 30.7 bits (66), Expect = 8.9
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -2

Query: 331 EYNHFQ*LFKIIHLKYIYSKFNKKYQCRRDTNK-RKYCL 218
           +YN    LF+ IH K  Y  F +++  ++D NK  KYC+
Sbjct: 73  KYNSLTRLFEGIHCKICYLDFAQRWVYQQDCNKFYKYCI 111


>UniRef50_Q4UFF0 Cluster: Putative uncharacterized protein; n=2;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria annulata
          Length = 222

 Score = 30.7 bits (66), Expect = 8.9
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -3

Query: 123 F*KNKDKIESHSKITLVTKNVTSINF 46
           F K +DK+E HS + +  KN+TS NF
Sbjct: 136 FPKKRDKVELHSLLEVFKKNLTSQNF 161


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 299,982,248
Number of Sequences: 1657284
Number of extensions: 5098880
Number of successful extensions: 12024
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12016
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13647406432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)