Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1122
         (501 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF119711-1|ABO69251.1| 3327|Homo sapiens beta-xin protein.             29   6.9  
AY820969-1|AAV87913.1| 3345|Homo sapiens CMYA3 protein.                29   6.9  
AL832336-1|CAD91137.1| 1087|Homo sapiens hypothetical protein pr...    29   6.9  
AL832011-1|CAD91146.1| 1074|Homo sapiens hypothetical protein pr...    29   6.9  
AL831970-1|CAD89919.1|  979|Homo sapiens hypothetical protein pr...    29   6.9  
AK092683-1|BAC03945.1|  425|Homo sapiens protein ( Homo sapiens ...    29   6.9  

>EF119711-1|ABO69251.1| 3327|Homo sapiens beta-xin protein.
          Length = 3327

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 28   ADNVHLTETQKEKAKQYTSECVKESGVSTE 117
            + N H+TE +KE   Q T+E V  SG+ +E
Sbjct: 2353 SQNQHITEVEKEMPLQKTNEEVSLSGIDSE 2382


>AY820969-1|AAV87913.1| 3345|Homo sapiens CMYA3 protein.
          Length = 3345

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 28   ADNVHLTETQKEKAKQYTSECVKESGVSTE 117
            + N H+TE +KE   Q T+E V  SG+ +E
Sbjct: 2400 SQNQHITEVEKEMPLQKTNEEVSLSGIDSE 2429


>AL832336-1|CAD91137.1| 1087|Homo sapiens hypothetical protein
           protein.
          Length = 1087

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 28  ADNVHLTETQKEKAKQYTSECVKESGVSTE 117
           + N H+TE +KE   Q T+E V  SG+ +E
Sbjct: 113 SQNQHITEVEKEMPLQKTNEEVSLSGIDSE 142


>AL832011-1|CAD91146.1| 1074|Homo sapiens hypothetical protein
           protein.
          Length = 1074

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 28  ADNVHLTETQKEKAKQYTSECVKESGVSTE 117
           + N H+TE +KE   Q T+E V  SG+ +E
Sbjct: 100 SQNQHITEVEKEMPLQKTNEEVSLSGIDSE 129


>AL831970-1|CAD89919.1|  979|Homo sapiens hypothetical protein
           protein.
          Length = 979

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 28  ADNVHLTETQKEKAKQYTSECVKESGVSTE 117
           + N H+TE +KE   Q T+E V  SG+ +E
Sbjct: 5   SQNQHITEVEKEMPLQKTNEEVSLSGIDSE 34


>AK092683-1|BAC03945.1|  425|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35364 fis, clone SKMUS2000726. ).
          Length = 425

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 28  ADNVHLTETQKEKAKQYTSECVKESGVSTE 117
           + N H+TE +KE   Q T+E V  SG+ +E
Sbjct: 183 SQNQHITEVEKEMPLQKTNEEVSLSGIDSE 212


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,036,064
Number of Sequences: 237096
Number of extensions: 1193706
Number of successful extensions: 6013
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6013
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)