Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1122
         (501 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               55   5e-10
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              50   1e-08
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              49   2e-08
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              46   3e-07
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              46   3e-07
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    43   2e-06
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    43   2e-06
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    39   3e-05
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   1.8  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   4.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   4.1  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   4.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   7.2  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 54.8 bits (126), Expect = 5e-10
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
 Frame = +1

Query: 85  ECVKESGVSTEVINAAKTGQYSED-KAFKKFVLCFFNKSAILNSDGTLNMDVALAKLPPG 261
           +C KES VS   +   K G   +D +  K ++ CF  K  IL+ +  +++  AL  LP  
Sbjct: 28  DCRKESKVSWAALKKMKAGDMEQDDQNLKCYLKCFMTKHGILDKNAEVDVQKALRHLPRS 87

Query: 262 VNKSEAQSVLEQCKDKTGQDAADKAFEIFQCY 357
           +  S  + +  +CK    +D  +KA+++ +CY
Sbjct: 88  MQDS-TKKLFNKCKSIQNEDPCEKAYQLVKCY 118


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 50.0 bits (114), Expect = 1e-08
 Identities = 23/103 (22%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
 Frame = +1

Query: 58  KEKAKQYTSECVKESGVSTEVINAAKTGQYSEDKAFKKFVLCFFNKSAILN-SDGTLNMD 234
           +E   +Y  +C+ E+  + E + A + G++ ED+  K +  C   K  +++  +G +  +
Sbjct: 33  REMTSKYRKKCIGETKTTIEDVEATEYGEFPEDEKLKCYFNCVLEKFNVMDKKNGKIRYN 92

Query: 235 VALAKLPPGVNKSEAQSVLEQCKDKTGQDAADKAFEIFQCYYK 363
           + L K+ P   K     +++ C +    D  +K+F   +C Y+
Sbjct: 93  L-LKKVIPEAFKEIGVEMIDSCSNVDSSDKCEKSFMFMKCMYE 134


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 49.2 bits (112), Expect = 2e-08
 Identities = 28/127 (22%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
 Frame = +1

Query: 19  NCGADNVHLTETQKEKAKQYTSECVKESGVSTEVINAAKTGQYSEDKAFKKFVLCFFNKS 198
           +CG     +++     A    + C  ++GV+T  I A + GQ+ E +  K ++ C + + 
Sbjct: 21  HCGTRPSFVSDEMIATAASVVNACQTQTGVATVDIEAVRNGQWPETRQLKCYMYCLWEQF 80

Query: 199 AILNSDGTLNMDVALA---KLPPGVNKSEAQSVLEQCKDKTGQDAADKAFEIFQCYYK-G 366
            +++    L+++  L    ++P    ++E Q  + +CK     D  + A+   +CY +  
Sbjct: 81  GLVDDKRELSLNGMLTFFQRIP--AYRAEVQKAISECKGIAKGDNCEYAYRFNKCYAELS 138

Query: 367 TKTHILF 387
            +T+ LF
Sbjct: 139 PRTYYLF 145


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 45.6 bits (103), Expect = 3e-07
 Identities = 23/95 (24%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
 Frame = +1

Query: 82  SECVKESGVSTEVINAAKTGQYS-EDKAFKKFVLCFFNKSAILNSDGTLNMDVALAKLPP 258
           S C+ ++G++ ++IN    G+ + ED+  + ++ C   K + ++ DG  N  V+      
Sbjct: 31  SICMAKTGINKQIINDVNDGKINIEDENVQLYIECAMKKFSFVDKDGNFNEHVSREIAKI 90

Query: 259 GVNKSEAQSVLEQCKDKTGQDAADKAFEIFQCYYK 363
            +N++E   ++ +C   +  +   K  +IFQC  K
Sbjct: 91  FLNENEINQLITECSAISDTNVHLKITKIFQCITK 125


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 45.6 bits (103), Expect = 3e-07
 Identities = 23/106 (21%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
 Frame = +1

Query: 43  LTETQKEKAKQYTSECVKESGVSTEVINAAKTGQYSE-DKAFKKFVLCFFNKSAILNSDG 219
           ++E    K ++  S C +E+G+  +  +  K G + + D+    +V C   K   +N+D 
Sbjct: 18  VSEESINKLRKIESVCAEENGIDLKKADDVKKGIFDKNDEKLACYVDCMLKKVGFVNADT 77

Query: 220 TLNMDVALAKLPPGVNKSEAQSVLEQCKDKTGQDAADKAFEIFQCY 357
           T N +    +    ++  +   ++  CKD T  ++  K+ ++ QC+
Sbjct: 78  TFNEE-KFRERTTKLDSEQVNRLVNNCKDITESNSCKKSSKLLQCF 122


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 43.2 bits (97), Expect = 2e-06
 Identities = 19/91 (20%), Positives = 44/91 (48%)
 Frame = +1

Query: 82  SECVKESGVSTEVINAAKTGQYSEDKAFKKFVLCFFNKSAILNSDGTLNMDVALAKLPPG 261
           + C+ E G +   I+    G    + +   ++ C     ++++ +  ++ D+ L  LP  
Sbjct: 43  ARCMSEHGTTQAQIDDVDKGNLVNEPSITCYMYCLLEAFSLVDDEANVDEDIMLGLLPDQ 102

Query: 262 VNKSEAQSVLEQCKDKTGQDAADKAFEIFQC 354
           + +  AQSV+ +C   +G D  +K + + +C
Sbjct: 103 LQE-RAQSVMGKCLPTSGSDNCNKIYNLAKC 132


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 43.2 bits (97), Expect = 2e-06
 Identities = 19/91 (20%), Positives = 44/91 (48%)
 Frame = +1

Query: 82  SECVKESGVSTEVINAAKTGQYSEDKAFKKFVLCFFNKSAILNSDGTLNMDVALAKLPPG 261
           + C+ E G +   I+    G    + +   ++ C     ++++ +  ++ D+ L  LP  
Sbjct: 43  ARCMSEHGTTQAQIDDVDKGNLVNEPSITCYMYCLLEAFSLVDDEANVDEDIMLGLLPDQ 102

Query: 262 VNKSEAQSVLEQCKDKTGQDAADKAFEIFQC 354
           + +  AQSV+ +C   +G D  +K + + +C
Sbjct: 103 LQE-RAQSVMGKCLPTSGSDNCNKIYNLAKC 132


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 39.1 bits (87), Expect = 3e-05
 Identities = 25/121 (20%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
 Frame = +1

Query: 43  LTETQKEK-AKQYTSECVKESGVSTEVINAAKTGQYSEDKAFKKFVLCFFNKSAILNSDG 219
           ++  Q EK AK     C+++  ++ E+++  + G++ +D   + +  C   K      +G
Sbjct: 24  MSADQVEKLAKNMRKSCLQKIAITEELVDGMRRGEFPDDHDLQCYTTCIM-KLLRTFKNG 82

Query: 220 TLNMDVALAKLPPGVNKSEA---QSVLEQCKDK--TGQDAADKAFEIFQCYYKGTKTHIL 384
             + D+ + +L   +   E    + ++  C+++  TG D   K ++  QC+YK       
Sbjct: 83  NFDFDMIVKQLEITMPPEEVVIGKEIVAVCRNEEYTGDDC-QKTYQYVQCHYKQNPEKFF 141

Query: 385 F 387
           F
Sbjct: 142 F 142


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 317 KTQPIKPSRSSNATTKGPRHIFYF 388
           KT   K  R   +T+K PR  F+F
Sbjct: 423 KTHVWKKGRDKKSTSKKPRRKFHF 446


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = +1

Query: 7   FAVFNCGADNVHLTETQKEKAKQYTSECVKESGVSTEVINAAKTGQY 147
           F+++    D  H     KE   +YT+E +   GVS E +   K   Y
Sbjct: 418 FSIYKTILDYYH---KYKENLPKYTTEELNFPGVSIESVTVDKLITY 461


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = +1

Query: 7   FAVFNCGADNVHLTETQKEKAKQYTSECVKESGVSTEVINAAKTGQY 147
           F+++    D  H     KE   +YT+E +   GVS E +   K   Y
Sbjct: 418 FSIYKTILDYYH---KYKENLPKYTTEELNFPGVSIESVTVDKLITY 461


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = +1

Query: 7   FAVFNCGADNVHLTETQKEKAKQYTSECVKESGVSTEVINAAKTGQY 147
           F+++    D  H     KE   +YT+E +   GVS E +   K   Y
Sbjct: 44  FSIYKTILDYYH---KYKENLPKYTTEELNFPGVSIESVTVDKLITY 87


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 205 LNSDGTLNMDVALAKLPPG 261
           L  DG   +DVA+  L PG
Sbjct: 654 LPPDGRTEIDVAIKTLKPG 672


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,236
Number of Sequences: 438
Number of extensions: 2154
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)