Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1120
         (320 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B5CF6 Cluster: PREDICTED: similar to Si:dkey-21...    32   2.8  
UniRef50_Q7REB0 Cluster: Asparagine-rich protein; n=4; Plasmodiu...    32   2.8  
UniRef50_Q98S48 Cluster: Putative uncharacterized protein orf845...    31   6.5  

>UniRef50_UPI00015B5CF6 Cluster: PREDICTED: similar to Si:dkey-21k10.1
            protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
            to Si:dkey-21k10.1 protein - Nasonia vitripennis
          Length = 1992

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -3

Query: 123  HIPTSQFQVSSPFETKPKSKFY*IAPFKTERMIASSLSE 7
            H PT      S  ETKPK+++  + P+   R++   LSE
Sbjct: 1443 HGPTKSCAYGSQSETKPKNRYANLFPYDESRVVLDKLSE 1481


>UniRef50_Q7REB0 Cluster: Asparagine-rich protein; n=4; Plasmodium
           (Vinckeia)|Rep: Asparagine-rich protein - Plasmodium
           yoelii yoelii
          Length = 779

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = -1

Query: 218 FCGGSTIPACHSFGRYCNVIKRSGLYNSRIVNIFQRHNF--KSQALLRQSQNLN 63
           FC   T+  C+      N+ K+ G   + IVN+  R+NF   S+ LL    N N
Sbjct: 581 FCSYDTVEKCYDDFEIINISKKYGTLRNSIVNMNLRYNFLYNSKRLLNNYINNN 634


>UniRef50_Q98S48 Cluster: Putative uncharacterized protein orf845;
           n=1; Guillardia theta|Rep: Putative uncharacterized
           protein orf845 - Guillardia theta (Cryptomonas phi)
          Length = 845

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -1

Query: 179 GRYCNVIKRSGLYNSRIVNIFQRHNFKSQALLRQSQNLNFIE 54
           G   N+I ++ + NSR+ N F R  ++   LL +  N  F E
Sbjct: 243 GNLINIINKNEINNSRVSNYFSRKYYQQVVLLNKHLNNKFNE 284


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 263,451,001
Number of Sequences: 1657284
Number of extensions: 4368809
Number of successful extensions: 7408
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7406
length of database: 575,637,011
effective HSP length: 83
effective length of database: 438,082,439
effective search space used: 10075896097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)