Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1120
         (320 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024434-1|ABC86496.1|  344|Drosophila melanogaster IP02441p pro...    27   7.1  
AE014296-738|AAF47824.2|  419|Drosophila melanogaster CG32256-PA...    27   7.1  
AY094657-1|AAM11010.1|  503|Drosophila melanogaster AT19250p pro...    26   9.4  
AE014134-748|AAF51005.1|  503|Drosophila melanogaster CG15435-PA...    26   9.4  

>BT024434-1|ABC86496.1|  344|Drosophila melanogaster IP02441p
           protein.
          Length = 344

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 28  HAFRFKGCYSIKFRFWLCL 84
           H+F+ KG Y+ +  FW CL
Sbjct: 294 HSFQSKGNYADELYFWFCL 312


>AE014296-738|AAF47824.2|  419|Drosophila melanogaster CG32256-PA
           protein.
          Length = 419

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 28  HAFRFKGCYSIKFRFWLCL 84
           H+F+ KG Y+ +  FW CL
Sbjct: 294 HSFQSKGNYADELYFWFCL 312


>AY094657-1|AAM11010.1|  503|Drosophila melanogaster AT19250p
           protein.
          Length = 503

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = -1

Query: 161 IKRSGLYNSRIVNIFQRHNFKSQALLRQSQNLNFIE*HPL 42
           +K + LY  + VN+   +    ++ L  +++LN++E  P+
Sbjct: 88  LKLAELYQQKRVNVSDANKMDKESALFTAEDLNYVEQRPV 127


>AE014134-748|AAF51005.1|  503|Drosophila melanogaster CG15435-PA
           protein.
          Length = 503

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = -1

Query: 161 IKRSGLYNSRIVNIFQRHNFKSQALLRQSQNLNFIE*HPL 42
           +K + LY  + VN+   +    ++ L  +++LN++E  P+
Sbjct: 88  LKLAELYQQKRVNVSDANKMDKESALFTAEDLNYVEQRPV 127


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,726,694
Number of Sequences: 53049
Number of extensions: 202383
Number of successful extensions: 329
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 329
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 674007744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)