Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1119
(350 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1154 - 24402550-24405073,24405909-24406330,24407318-24408856 31 0.19
01_01_0957 + 7516314-7517489 30 0.59
01_06_0243 + 27833497-27834042,27834144-27834238,27834400-27835567 29 0.78
09_04_0154 - 15180921-15181811,15181986-15182070,15182205-15182419 29 1.0
01_05_0095 + 18069688-18070416 29 1.0
06_01_0637 + 4635136-4635969 29 1.4
03_06_0116 + 31773295-31773603,31773800-31773946,31774080-317741... 29 1.4
02_05_0717 + 31190626-31191234,31191954-31192394,31192699-311928... 28 1.8
09_06_0050 + 20493063-20493137,20493253-20493347,20493450-204935... 28 2.4
09_04_0155 - 15185985-15186755,15187049-15187236,15187479-151875... 27 3.1
04_01_0500 - 6540769-6541482,6541819-6541877,6541965-6542064,654... 27 3.1
11_06_0631 - 25656885-25657000,25658591-25658658,25658957-256589... 27 4.1
05_03_0184 + 9339939-9340896,9341003-9341083,9341166-9341383,934... 27 4.1
02_04_0275 - 21469391-21470650 27 4.1
10_01_0236 + 2486371-2486952 27 5.5
08_02_0640 - 19636968-19638230 27 5.5
07_03_1064 + 23700662-23700787,23701709-23701870,23701983-237021... 27 5.5
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 27 5.5
03_05_0675 + 26630466-26632070 27 5.5
05_07_0146 + 28018236-28018580,28018670-28018777,28018984-280191... 26 7.2
04_04_1079 - 30663919-30665044,30665143-30665298,30665405-306655... 26 7.2
04_01_0222 - 2805329-2805780,2805866-2806611,2806730-2806778,280... 26 7.2
03_02_0505 + 8981856-8982879,8983014-8983129,8985407-8985994,898... 26 7.2
02_01_0353 + 2545982-2549833 26 7.2
01_06_1596 - 38514278-38514346,38514547-38514705,38514776-385148... 26 7.2
01_02_0128 + 11407888-11408241 26 7.2
11_01_0687 - 5651002-5651453,5651535-5651951,5652621-5653338,565... 26 9.6
11_01_0054 + 416626-417297,417757-417885,418197-418301,418385-41... 26 9.6
10_08_0095 + 14760292-14760624,14760689-14761000,14761768-147624... 26 9.6
10_06_0099 - 10677024-10677073,10677894-10677998,10678254-106783... 26 9.6
08_01_0162 - 1302497-1302787,1304608-1305271,1305380-1306927,130... 26 9.6
07_03_1726 - 29062654-29064414 26 9.6
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 26 9.6
04_04_0318 + 24347364-24348826,24348920-24349048,24349158-243492... 26 9.6
03_05_0361 - 23448459-23448910,23448990-23449406,23449542-234497... 26 9.6
03_01_0585 - 4331111-4331850,4331960-4332224 26 9.6
01_06_1600 + 38552396-38552600,38552906-38552928 26 9.6
>07_03_1154 - 24402550-24405073,24405909-24406330,24407318-24408856
Length = 1494
Score = 31.5 bits (68), Expect = 0.19
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +2
Query: 170 QAAPRRRGRKRKSDLPPPHELLASPNFKLFLXACKMCPFKCNSIKEMSEHKAAIHGAARA 349
Q AP R+R S LP P A +LFL A P ++ + +H A HG A +
Sbjct: 60 QHAPEDALRRRLSALPLP-SAAADDLRELFLQASARFPLSWRPVRRLLDHLTAAHGFAHS 118
>01_01_0957 + 7516314-7517489
Length = 391
Score = 29.9 bits (64), Expect = 0.59
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 59 QKKDETQVVHVTQKKVPSATEILEKAKALQKVKATIAQAAPRRRGRKRKSD-LPPPHEL 232
+KK + Q Q + T + E KA++ A A AAP RG + D PPP EL
Sbjct: 117 KKKKKKQPAPPPQPPTTTTTVLPEPVKAIEAA-AKKAAAAPSARGANEEVDRRPPPPEL 174
>01_06_0243 + 27833497-27834042,27834144-27834238,27834400-27835567
Length = 602
Score = 29.5 bits (63), Expect = 0.78
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 267 AXRNSLKLGEASSSWGGGRSLFRFRPLRRGAAWAM 163
A +N+ KLGE S+ R R P + GA WA+
Sbjct: 340 ATKNAFKLGETSTFPPALRDCARINPSKPGARWAL 374
>09_04_0154 - 15180921-15181811,15181986-15182070,15182205-15182419
Length = 396
Score = 29.1 bits (62), Expect = 1.0
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 170 QAAPRRRGRKRKSDLPPPHELLASPNFKLFLXACKMCPFKCNSIKEMSEHK 322
QA P K++ + PP +L +PN + C +C KCN+ ++ H+
Sbjct: 266 QALPE--AAKQEKNNPP--KLAKNPNKQPSEWVCSLCQAKCNTESQLEHHR 312
>01_05_0095 + 18069688-18070416
Length = 242
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -2
Query: 286 EGTHLARXQEQLEVGRGQQLVGRGEVALPLPAPPPGSRLGYG 161
E L R + QL V G G A PAPPPG + G
Sbjct: 96 ERQQLKRARLQLAVAAAGTPAGMGFAAAQAPAPPPGHVIAVG 137
>06_01_0637 + 4635136-4635969
Length = 277
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 206 SDLPPPHELLASPNFKLFLXAC-KMCPFKCNSIKEMSEH 319
SD PP ASP F+ F+ C +M P K S ++ +H
Sbjct: 228 SDGPPEAPATASPEFRSFVGCCLQMNPAKRPSAVQLMDH 266
>03_06_0116 +
31773295-31773603,31773800-31773946,31774080-31774158,
31777558-31778180
Length = 385
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 98 KKVPSATEILEKAKALQKVKATI--AQAAPRRRGRKRKSDLPPPHEL 232
KKV + ++L K A+ + + A PRRR R+ D P H+L
Sbjct: 102 KKVGAPPDVLTKLTAVPAAQQQLDAADGHPRRRHEPRRDDDVPDHQL 148
>02_05_0717 +
31190626-31191234,31191954-31192394,31192699-31192802,
31193000-31194384,31194508-31194548,31195065-31195133,
31195335-31195435,31195747-31195825,31195939-31196037,
31196119-31196187,31197609-31197658,31197749-31197925,
31198045-31198152,31198224-31198290
Length = 1132
Score = 28.3 bits (60), Expect = 1.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 223 GRGEVALPLPAPPPGSRLGYGGL 155
G G+ A P PPP SR G GG+
Sbjct: 13 GSGDGASSSPPPPPSSRKGSGGV 35
>09_06_0050 +
20493063-20493137,20493253-20493347,20493450-20493547,
20493684-20493842,20493944-20494055,20494185-20494728,
20494818-20494915,20494990-20495229,20495312-20495426,
20495528-20495732,20495805-20496373
Length = 769
Score = 27.9 bits (59), Expect = 2.4
Identities = 19/86 (22%), Positives = 33/86 (38%)
Frame = +2
Query: 32 SALPQVNSQQKKDETQVVHVTQKKVPSATEILEKAKALQKVKATIAQAAPRRRGRKRKSD 211
SA+ + QQ + VPS T + + + V T+ P + + +
Sbjct: 642 SAISSMTQQQTTCQHTPKSQLNLNVPSIT--IPELRGKLTVSRTVTNVGPALSKYRARVE 699
Query: 212 LPPPHELLASPNFKLFLXACKMCPFK 289
PP ++ SP+ F + PFK
Sbjct: 700 APPGVDVTVSPSLLTFNSTVRKLPFK 725
>09_04_0155 -
15185985-15186755,15187049-15187236,15187479-15187517,
15187741-15187768
Length = 341
Score = 27.5 bits (58), Expect = 3.1
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +2
Query: 266 ACKMCPFKCNSIKEMSEHK 322
+C++C +CNS K +S+H+
Sbjct: 302 SCEICKLQCNSEKVLSDHR 320
>04_01_0500 -
6540769-6541482,6541819-6541877,6541965-6542064,
6542113-6542322,6542507-6542765,6544022-6544215
Length = 511
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -2
Query: 268 RXQEQLEVG-RGQQLVGRGEVALPLPAPPPG 179
R +E+ E G +G++ G GE PLP PPPG
Sbjct: 13 RVEEEDEKGPQGER--GAGEPPPPLPPPPPG 41
>11_06_0631 -
25656885-25657000,25658591-25658658,25658957-25658996,
25659742-25659820,25659918-25661707,25662030-25662037,
25662305-25662367,25662504-25662820
Length = 826
Score = 27.1 bits (57), Expect = 4.1
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 125 LEKAKALQKVKATIAQAAPRRRGRKRKSD--LPPPHELLA 238
++K + V T QA PRRRG + D LP P LLA
Sbjct: 1 MKKFQPQGPVHMTHRQATPRRRGSRALHDLRLPNPPRLLA 40
>05_03_0184 +
9339939-9340896,9341003-9341083,9341166-9341383,
9341796-9342019,9342409-9343096
Length = 722
Score = 27.1 bits (57), Expect = 4.1
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 164 IAQAAPRRRGRKRKSDLPPPHELLASPNFKL 256
+ Q A RR RKRK PP H L+ P F L
Sbjct: 571 VLQPAQDRRRRKRKVSFPPRH-ALSPPIFVL 600
>02_04_0275 - 21469391-21470650
Length = 419
Score = 27.1 bits (57), Expect = 4.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 217 GEVALPLPAPPPGSRLGYGG 158
G +AL +P P PGS G GG
Sbjct: 36 GHLALAIPIPKPGSSSGGGG 55
>10_01_0236 + 2486371-2486952
Length = 193
Score = 26.6 bits (56), Expect = 5.5
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 107 PSATEILEKAKALQKVKATIAQA-AP-RRRGRKRKSDLPPP 223
PSAT + + K + ++ QA AP RRR +R + LPPP
Sbjct: 99 PSATVVRRRIKKPRTPRSGEGQARAPQRRRPLERAAPLPPP 139
>08_02_0640 - 19636968-19638230
Length = 420
Score = 26.6 bits (56), Expect = 5.5
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 113 ATEILEKAKALQKVKATIAQAAPRRRGRKRKSDLPPPHELLASPN 247
A ++L A Q +A A P+ RG R + LP P LLA P+
Sbjct: 28 AVQVLRFLPA-QVDRACFAAVCPQWRGAARNALLPAPLPLLALPD 71
>07_03_1064 +
23700662-23700787,23701709-23701870,23701983-23702101,
23703128-23703202,23704387-23704480,23704856-23704915,
23705083-23705151,23705457-23705555,23706201-23706245,
23706339-23706441,23706665-23706723
Length = 336
Score = 26.6 bits (56), Expect = 5.5
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +2
Query: 8 QGPLFFLQSALPQVNSQQKKDETQVVHVTQKKVPS----ATEILEKAKAL 145
+ L L LP++N + +KD TQVV Q++ S A+E LE K L
Sbjct: 80 ENTLRLLIICLPKLNLETRKDATQVVANLQRQQVSSKIVASEYLEANKDL 129
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 140 ALQKVKATIAQAAPRRRGRKRKSDLPPPHELLASP 244
A + + T A PRRRGRK KS +++ SP
Sbjct: 1733 ATSRGRKTQAGETPRRRGRKPKSLAASAGDVILSP 1767
>03_05_0675 + 26630466-26632070
Length = 534
Score = 26.6 bits (56), Expect = 5.5
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 43 PGQLTAEKGRDTSGA-CYTKEGAVCHRDIGKG*SITESQG 159
P Q A RDT A CY E HRDI G + +S G
Sbjct: 125 PEQCIAVVLRDTLRALCYLHEQGRIHRDIKAGNILVDSDG 164
>05_07_0146 +
28018236-28018580,28018670-28018777,28018984-28019148,
28019269-28019736,28019823-28019936,28020038-28020715
Length = 625
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 241 RGQQLVGRGEVALPLP-APPPGSRLGYGGLDF 149
+G+ +VG G+V +P APP S G ++F
Sbjct: 8 KGKNVVGGGDVGREMPVAPPSSSSAAVGMVEF 39
>04_04_1079 - 30663919-30665044,30665143-30665298,30665405-30665563,
30665640-30665770,30666230-30666315,30666607-30666673,
30666944-30667023,30667173-30667260,30667380-30667428,
30667516-30667608,30667725-30667808,30667986-30668044,
30668293-30668327,30668416-30668718,30669111-30669275,
30669701-30669780,30670932-30671003,30671143-30671234,
30671359-30671433,30671552-30671688,30671763-30671890,
30671942-30672033,30672473-30672808
Length = 1230
Score = 26.2 bits (55), Expect = 7.2
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +2
Query: 29 QSALPQVNSQQKKDETQVVHVTQKKVPSATEILEKAKALQKVKATIAQAAPRRRGRKRKS 208
Q+ LP+ K D + + + ++ + +K + +K + + APR+RGR S
Sbjct: 833 QTRLPETTYSLKPDTLEEIEI-ERSEETVQPCNDKLEENEKADTSHVKHAPRKRGRPSSS 891
>04_01_0222 -
2805329-2805780,2805866-2806611,2806730-2806778,
2807031-2807748,2808513-2808824
Length = 758
Score = 26.2 bits (55), Expect = 7.2
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -2
Query: 262 QEQLEVGRGQQLVGRGEVALPLPAPPPGSRLGYGG 158
Q E G GQQ G G APPP + GYGG
Sbjct: 301 QPGYEGGTGQQCYGVG-------APPPTGQQGYGG 328
>03_02_0505 +
8981856-8982879,8983014-8983129,8985407-8985994,
8986091-8986192
Length = 609
Score = 26.2 bits (55), Expect = 7.2
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -3
Query: 270 HAXRNSLKLGEASSSWGGGRSLFRFRPLRRGAAWAMVALTFCNA 139
H L+ + SW G +F RPL R A A A+ F +A
Sbjct: 473 HELEVPLRTFKTWRSWADGPFVFNTRPLSRDDACAQRAVFFLSA 516
>02_01_0353 + 2545982-2549833
Length = 1283
Score = 26.2 bits (55), Expect = 7.2
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +2
Query: 50 NSQQKKDETQVVHVTQKKVPSATEILEKAKALQKVKATIAQAAPRRRGR 196
N QK+ E + + QKK E EKAK + V AAP+RR R
Sbjct: 154 NDLQKQKEQLLRDIAQKK----KEEEEKAKEKKAVPEQQPVAAPKRRNR 198
>01_06_1596 -
38514278-38514346,38514547-38514705,38514776-38514898,
38514985-38515047,38515248-38515352,38515487-38515586,
38515716-38515786,38516329-38516385,38516830-38516907,
38516975-38517049,38517180-38517230,38517453-38517466,
38517516-38517616,38517703-38517764,38518346-38518372,
38518901-38519581
Length = 611
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 202 PLPAPPPGSRLGYGGLD 152
PLP PPP + G GG D
Sbjct: 53 PLPTPPPAAAAGGGGGD 69
>01_02_0128 + 11407888-11408241
Length = 117
Score = 26.2 bits (55), Expect = 7.2
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +1
Query: 7 SGSVVLPAVRTAPGQLTAEKGRDTSGACYTKEGAVCHRDIGKG*SITESQGH 162
S +VV+PA +PG +++ + R G + + ++CH G G +T++ H
Sbjct: 63 SAAVVIPAGGASPGGVSSTESR-ARGGFISHDMSLCHCR-GGGVPVTDAAQH 112
>11_01_0687 -
5651002-5651453,5651535-5651951,5652621-5653338,
5654106-5654417,5654482-5654814
Length = 743
Score = 25.8 bits (54), Expect = 9.6
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -2
Query: 262 QEQLEVGRGQQLVGRGEVALPLPAPPPGSRLGYGG 158
Q E G GQQ G G APPP + GYGG
Sbjct: 412 QPGYEGGTGQQRYGVG-------APPPTGQQGYGG 439
>11_01_0054 +
416626-417297,417757-417885,418197-418301,418385-418778,
419186-419283,419366-419614,419784-419843
Length = 568
Score = 25.8 bits (54), Expect = 9.6
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +2
Query: 179 PRRRGRKRKSDLPPPHELLASPNFKLFLXACKMCPFKCNSIKEMSEHKAAIHGA 340
P R ++R+ DL PP L + LFL + ++K S A H A
Sbjct: 8 PTHRVKRRRLDLSPPPHLNDLADELLFLILDRAAAHDPRALKSFSLVSRACHAA 61
>10_08_0095 +
14760292-14760624,14760689-14761000,14761768-14762489,
14762905-14763187,14763419-14763650,14763736-14764187
Length = 777
Score = 25.8 bits (54), Expect = 9.6
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -2
Query: 262 QEQLEVGRGQQLVGRGEVALPLPAPPPGSRLGYGG 158
Q E G GQQ G G APPP + GYGG
Sbjct: 412 QPGYEGGTGQQRYGVG-------APPPTGQQGYGG 439
>10_06_0099 -
10677024-10677073,10677894-10677998,10678254-10678315,
10678694-10679197,10679695-10680356,10680695-10680793,
10680881-10681110,10681227-10681278,10681391-10681577,
10681661-10681873,10682006-10682175,10683455-10683730,
10684188-10684643,10685527-10685766,10687517-10687771
Length = 1186
Score = 25.8 bits (54), Expect = 9.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 348 ARAAPWIAALCSDISLMELHLKGHILHAXRNSLKLGE 238
A + PW A + S + + L G+I++A NSL+ E
Sbjct: 541 APSLPWSAIMISSAVAIIVLLVGYIIYATLNSLEEAE 577
>08_01_0162 -
1302497-1302787,1304608-1305271,1305380-1306927,
1307360-1308768
Length = 1303
Score = 25.8 bits (54), Expect = 9.6
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 211 VALPLPAPPPGSRLGYGGL 155
VA P P+PPP S G GG+
Sbjct: 793 VAPPSPSPPPTSGSGSGGV 811
>07_03_1726 - 29062654-29064414
Length = 586
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 238 GQQLVGRGEVALPLPAPPPGSRLGYGG 158
G+ VG G++ P P PP ++ GG
Sbjct: 25 GECFVGEGDLVNPAPPPPQQQQVHEGG 51
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 25.8 bits (54), Expect = 9.6
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 110 SATEILEKAKALQKVKATIAQAAPRRRGRKRKSDLPPPHELLAS 241
+A + +EKA + +K K + P + K+ PPP ++ +S
Sbjct: 31 NAEDEIEKAVSAKKQKTVREKVVPSKEEAKKVKKQPPPKKVESS 74
>04_04_0318 +
24347364-24348826,24348920-24349048,24349158-24349293,
24349447-24349535,24349631-24349742,24349836-24349942,
24350033-24350129
Length = 710
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 250 EVGRGQQLVGRGEVALPLPAPPP 182
+V +G++ V LPLP PPP
Sbjct: 155 DVAKGKKAVDSVPTELPLPPPPP 177
>03_05_0361 -
23448459-23448910,23448990-23449406,23449542-23449735,
23449854-23449902,23450155-23450539,23450578-23450874,
23451650-23451961
Length = 701
Score = 25.8 bits (54), Expect = 9.6
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -2
Query: 262 QEQLEVGRGQQLVGRGEVALPLPAPPPGSRLGYGG 158
Q E G GQQ G G APPP + GYGG
Sbjct: 289 QPGYEGGTGQQRYGVG-------APPPTGQQGYGG 316
>03_01_0585 - 4331111-4331850,4331960-4332224
Length = 334
Score = 25.8 bits (54), Expect = 9.6
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 125 LEKAKALQKVKATIAQAAPRRRGRKRKSDLPPP 223
L +KA AT A A P RRG R + +PPP
Sbjct: 157 LRGSKAKVNFPATPAAARP-RRGNTRATAVPPP 188
>01_06_1600 + 38552396-38552600,38552906-38552928
Length = 75
Score = 25.8 bits (54), Expect = 9.6
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = -3
Query: 255 SLKLGEASSSWGGGRSLFRFRPLRRGAAWAMVA 157
SL L EA S GGGR R+RP +G A AM+A
Sbjct: 18 SLSLCEAGS--GGGRGGGRWRP-AKGDAMAMMA 47
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,730,208
Number of Sequences: 37544
Number of extensions: 194088
Number of successful extensions: 1178
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 518263348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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