Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1119
(350 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101774-1|AAI01775.1| 1182|Homo sapiens stoned B/TFIIA-alpha/be... 32 0.59
BC101772-1|AAI01773.1| 1182|Homo sapiens stoned B/TFIIA-alpha/be... 32 0.59
BC064585-1|AAH64585.1| 477|Homo sapiens GTF2A1L protein protein. 32 0.59
BC025991-1|AAH25991.1| 478|Homo sapiens TFIIA-alpha/beta-like f... 32 0.59
AK223350-1|BAD97070.1| 478|Homo sapiens TFIIA-alpha/beta-like f... 32 0.59
AF106857-1|AAD39634.1| 478|Homo sapiens TFIIA large subunit iso... 32 0.59
AF026169-1|AAD39617.1| 1182|Homo sapiens SALF protein. 32 0.59
AC073082-2|AAY15064.1| 1182|Homo sapiens unknown protein. 32 0.59
BC113563-1|AAI13564.1| 662|Homo sapiens hypothetical protein MG... 31 1.4
BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein. 29 3.1
AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein. 29 3.1
AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein. 29 3.1
BC063290-1|AAH63290.1| 1066|Homo sapiens zinc finger protein 295... 29 4.1
BC042173-1|AAH42173.1| 722|Homo sapiens ankyrin repeat domain 6... 29 4.1
AP001745-3|BAA95529.1| 1066|Homo sapiens ZNF295 protein. 29 4.1
AL159174-2|CAI39610.1| 640|Homo sapiens ankyrin repeat domain 6... 29 4.1
AL159174-1|CAI39609.1| 692|Homo sapiens ankyrin repeat domain 6... 29 4.1
AL117504-1|CAB55968.1| 641|Homo sapiens hypothetical protein pr... 29 4.1
AL096678-3|CAI42281.1| 640|Homo sapiens ankyrin repeat domain 6... 29 4.1
AL096678-2|CAI42280.1| 692|Homo sapiens ankyrin repeat domain 6... 29 4.1
AB041014-1|BAD74063.1| 1066|Homo sapiens zinc finger protein lon... 29 4.1
AB033053-1|BAA86541.1| 1069|Homo sapiens KIAA1227 protein protein. 29 4.1
AB023174-1|BAA76801.2| 693|Homo sapiens KIAA0957 protein protein. 29 4.1
BC107883-1|AAI07884.1| 501|Homo sapiens SF3B1 protein protein. 29 5.5
BC056155-1|AAH56155.1| 789|Homo sapiens SF3B1 protein protein. 29 5.5
BC029418-1|AAH29418.1| 501|Homo sapiens SF3B1 protein protein. 29 5.5
BC015530-1|AAH15530.1| 496|Homo sapiens Unknown (protein for IM... 29 5.5
AL513218-4|CAI12283.1| 858|Homo sapiens coiled-coil and C2 doma... 29 5.5
AL513218-3|CAI12284.1| 852|Homo sapiens coiled-coil and C2 doma... 29 5.5
AL513218-2|CAI12282.1| 771|Homo sapiens coiled-coil and C2 doma... 29 5.5
AB058739-1|BAB47465.1| 718|Homo sapiens KIAA1836 protein protein. 29 5.5
AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility as... 28 7.2
AK022797-1|BAB14248.1| 801|Homo sapiens protein ( Homo sapiens ... 28 7.2
AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protei... 28 7.2
BC053992-1|AAH53992.1| 1312|Homo sapiens SR-related CTD-associat... 28 9.5
BC036884-1|AAH36884.1| 884|Homo sapiens ZNF462 protein protein. 28 9.5
BC033892-1|AAH33892.1| 257|Homo sapiens transmembrane protein 5... 28 9.5
AL512593-2|CAI14942.1| 931|Homo sapiens zinc finger protein 462... 28 9.5
AL512593-1|CAI14941.1| 1411|Homo sapiens zinc finger protein 462... 28 9.5
AK027866-1|BAB55417.1| 1181|Homo sapiens protein ( Homo sapiens ... 28 9.5
AK024444-1|BAB15734.1| 1343|Homo sapiens FLJ00034 protein protein. 28 9.5
AJ556110-1|CAD88640.1| 121|Homo sapiens prostate apoptosis resp... 28 9.5
AF254411-1|AAF87552.1| 1312|Homo sapiens ser/arg-rich pre-mRNA s... 28 9.5
AB108448-1|BAC99030.1| 121|Homo sapiens prostate apoptosis resp... 28 9.5
AB058706-1|BAB47432.2| 1412|Homo sapiens KIAA1803 protein protein. 28 9.5
>BC101774-1|AAI01775.1| 1182|Homo sapiens stoned
B/TFIIA-alpha/beta-like factor protein.
Length = 1182
Score = 31.9 bits (69), Expect = 0.59
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +1
Query: 7 SGSVVLPAVRTAPGQLTAEKGRDTSGACYTKEGAVCHRDIGKG*SITESQGH 162
+ S+V+PA RT P TAE G S A +T G H + G ++ GH
Sbjct: 786 TASLVIPAGRTLPSFTTAELGTSNSSANFTFPGYPIH--VPAGVTLQTVSGH 835
>BC101772-1|AAI01773.1| 1182|Homo sapiens stoned
B/TFIIA-alpha/beta-like factor protein.
Length = 1182
Score = 31.9 bits (69), Expect = 0.59
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +1
Query: 7 SGSVVLPAVRTAPGQLTAEKGRDTSGACYTKEGAVCHRDIGKG*SITESQGH 162
+ S+V+PA RT P TAE G S A +T G H + G ++ GH
Sbjct: 786 TASLVIPAGRTLPSFTTAELGTSNSSANFTFPGYPIH--VPAGVTLQTVSGH 835
>BC064585-1|AAH64585.1| 477|Homo sapiens GTF2A1L protein protein.
Length = 477
Score = 31.9 bits (69), Expect = 0.59
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +1
Query: 7 SGSVVLPAVRTAPGQLTAEKGRDTSGACYTKEGAVCHRDIGKG*SITESQGH 162
+ S+V+PA RT P TAE G S A +T G H + G ++ GH
Sbjct: 81 TASLVIPAGRTLPSFTTAELGTSNSSANFTFPGYPIH--VPAGVTLQTVSGH 130
>BC025991-1|AAH25991.1| 478|Homo sapiens TFIIA-alpha/beta-like
factor protein.
Length = 478
Score = 31.9 bits (69), Expect = 0.59
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +1
Query: 7 SGSVVLPAVRTAPGQLTAEKGRDTSGACYTKEGAVCHRDIGKG*SITESQGH 162
+ S+V+PA RT P TAE G S A +T G H + G ++ GH
Sbjct: 82 TASLVIPAGRTLPSFTTAELGTSNSSANFTFPGYPIH--VPAGVTLQTVSGH 131
>AK223350-1|BAD97070.1| 478|Homo sapiens TFIIA-alpha/beta-like
factor isoform 1 variant protein.
Length = 478
Score = 31.9 bits (69), Expect = 0.59
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +1
Query: 7 SGSVVLPAVRTAPGQLTAEKGRDTSGACYTKEGAVCHRDIGKG*SITESQGH 162
+ S+V+PA RT P TAE G S A +T G H + G ++ GH
Sbjct: 82 TASLVIPAGRTLPSFATAELGTSNSSANFTFPGYPIH--VPAGVTLQTVSGH 131
>AF106857-1|AAD39634.1| 478|Homo sapiens TFIIA large subunit
isoform ALF protein.
Length = 478
Score = 31.9 bits (69), Expect = 0.59
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +1
Query: 7 SGSVVLPAVRTAPGQLTAEKGRDTSGACYTKEGAVCHRDIGKG*SITESQGH 162
+ S+V+PA RT P TAE G S A +T G H + G ++ GH
Sbjct: 82 TASLVIPAGRTLPSFTTAELGTSNSSANFTFPGYPIH--VPAGVTLQTVSGH 131
>AF026169-1|AAD39617.1| 1182|Homo sapiens SALF protein.
Length = 1182
Score = 31.9 bits (69), Expect = 0.59
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +1
Query: 7 SGSVVLPAVRTAPGQLTAEKGRDTSGACYTKEGAVCHRDIGKG*SITESQGH 162
+ S+V+PA RT P TAE G S A +T G H + G ++ GH
Sbjct: 786 TASLVIPAGRTLPSFTTAELGTSNSSANFTFPGYPIH--VPAGVTLQTVSGH 835
>AC073082-2|AAY15064.1| 1182|Homo sapiens unknown protein.
Length = 1182
Score = 31.9 bits (69), Expect = 0.59
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +1
Query: 7 SGSVVLPAVRTAPGQLTAEKGRDTSGACYTKEGAVCHRDIGKG*SITESQGH 162
+ S+V+PA RT P TAE G S A +T G H + G ++ GH
Sbjct: 786 TASLVIPAGRTLPSFTTAELGTSNSSANFTFPGYPIH--VPAGVTLQTVSGH 835
>BC113563-1|AAI13564.1| 662|Homo sapiens hypothetical protein
MGC5297 protein.
Length = 662
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +2
Query: 11 GPLFFLQSALPQVNSQQKKDETQVVHVTQKKVPSATEILEKAKALQKVKATIAQAAPRR- 187
GP+F S ++ K +E+Q+ + + S+ E+L ++ + T+A A +R
Sbjct: 78 GPVFSQVSDCDRLEQNVKNEESQMFYRRLSNLTSSEEVLSFISTMETLPDTMAAGALQRI 137
Query: 188 -RGRKRKSDLPPPHELLASPNFK 253
K+ D P E+L + F+
Sbjct: 138 CEVEKKDGDQGLPKEILENSIFQ 160
>BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein.
Length = 1481
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 32 SALPQVNSQQKKDETQVVHVTQKKVPSATEILEKAKAL 145
SAL + SQQ+ ET + K+ PSA IL A+ +
Sbjct: 1158 SALTEATSQQQDSETMAPEESLKEAPSAPVILPSAEQM 1195
>AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein.
Length = 1490
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 32 SALPQVNSQQKKDETQVVHVTQKKVPSATEILEKAKAL 145
SAL + SQQ+ ET + K+ PSA IL A+ +
Sbjct: 1158 SALTEATSQQQDSETMAPEESLKEAPSAPVILPSAEQM 1195
>AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein.
Length = 1535
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 32 SALPQVNSQQKKDETQVVHVTQKKVPSATEILEKAKAL 145
SAL + SQQ+ ET + K+ PSA IL A+ +
Sbjct: 1212 SALTEATSQQQDSETMAPEESLKEAPSAPVILPSAEQM 1249
>BC063290-1|AAH63290.1| 1066|Homo sapiens zinc finger protein 295
protein.
Length = 1066
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 215 PPPHELLASPNFKLFLXACKMCPFKCNSIKEMSEHKAAIHGAA 343
P H LASP + C++C K +S+ E H+ AA
Sbjct: 706 PKEHAPLASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAA 748
>BC042173-1|AAH42173.1| 722|Homo sapiens ankyrin repeat domain 6
protein.
Length = 722
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 179 PRRRGRKRKSDLPPPHELLASPNFKLF 259
P++R R R S PPPHE A + L+
Sbjct: 371 PKKRNRHRCSSPPPPHEFRAYQLYTLY 397
>AP001745-3|BAA95529.1| 1066|Homo sapiens ZNF295 protein.
Length = 1066
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 215 PPPHELLASPNFKLFLXACKMCPFKCNSIKEMSEHKAAIHGAA 343
P H LASP + C++C K +S+ E H+ AA
Sbjct: 706 PKEHAPLASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAA 748
>AL159174-2|CAI39610.1| 640|Homo sapiens ankyrin repeat domain 6
protein.
Length = 640
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 179 PRRRGRKRKSDLPPPHELLASPNFKLF 259
P++R R R S PPPHE A + L+
Sbjct: 284 PKKRNRHRCSSPPPPHEFRAYQLYTLY 310
>AL159174-1|CAI39609.1| 692|Homo sapiens ankyrin repeat domain 6
protein.
Length = 692
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 179 PRRRGRKRKSDLPPPHELLASPNFKLF 259
P++R R R S PPPHE A + L+
Sbjct: 336 PKKRNRHRCSSPPPPHEFRAYQLYTLY 362
>AL117504-1|CAB55968.1| 641|Homo sapiens hypothetical protein
protein.
Length = 641
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 179 PRRRGRKRKSDLPPPHELLASPNFKLF 259
P++R R R S PPPHE A + L+
Sbjct: 285 PKKRNRHRCSSPPPPHEFRAYQLYTLY 311
>AL096678-3|CAI42281.1| 640|Homo sapiens ankyrin repeat domain 6
protein.
Length = 640
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 179 PRRRGRKRKSDLPPPHELLASPNFKLF 259
P++R R R S PPPHE A + L+
Sbjct: 284 PKKRNRHRCSSPPPPHEFRAYQLYTLY 310
>AL096678-2|CAI42280.1| 692|Homo sapiens ankyrin repeat domain 6
protein.
Length = 692
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 179 PRRRGRKRKSDLPPPHELLASPNFKLF 259
P++R R R S PPPHE A + L+
Sbjct: 336 PKKRNRHRCSSPPPPHEFRAYQLYTLY 362
>AB041014-1|BAD74063.1| 1066|Homo sapiens zinc finger protein long
form protein.
Length = 1066
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 215 PPPHELLASPNFKLFLXACKMCPFKCNSIKEMSEHKAAIHGAA 343
P H LASP + C++C K +S+ E H+ AA
Sbjct: 706 PKEHAPLASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAA 748
>AB033053-1|BAA86541.1| 1069|Homo sapiens KIAA1227 protein protein.
Length = 1069
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 215 PPPHELLASPNFKLFLXACKMCPFKCNSIKEMSEHKAAIHGAA 343
P H LASP + C++C K +S+ E H+ AA
Sbjct: 709 PKEHAPLASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAA 751
>AB023174-1|BAA76801.2| 693|Homo sapiens KIAA0957 protein protein.
Length = 693
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 179 PRRRGRKRKSDLPPPHELLASPNFKLF 259
P++R R R S PPPHE A + L+
Sbjct: 337 PKKRNRHRCSSPPPPHEFRAYQLYTLY 363
>BC107883-1|AAI07884.1| 501|Homo sapiens SF3B1 protein protein.
Length = 501
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 41 PQVNSQQKKDETQVVHVTQKKVPSATEILEKAKA--LQKVKATIAQAAPRRRGRK 199
P++N++ D + H+T+++ ++ EKAKA L+ V A P +R R+
Sbjct: 145 PKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELKVVNGAAASQPPSKRKRR 199
>BC056155-1|AAH56155.1| 789|Homo sapiens SF3B1 protein protein.
Length = 789
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 41 PQVNSQQKKDETQVVHVTQKKVPSATEILEKAKA--LQKVKATIAQAAPRRRGRK 199
P++N++ D + H+T+++ ++ EKAKA L+ V A P +R R+
Sbjct: 145 PKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELKVVNGAAASQPPSKRKRR 199
>BC029418-1|AAH29418.1| 501|Homo sapiens SF3B1 protein protein.
Length = 501
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 41 PQVNSQQKKDETQVVHVTQKKVPSATEILEKAKA--LQKVKATIAQAAPRRRGRK 199
P++N++ D + H+T+++ ++ EKAKA L+ V A P +R R+
Sbjct: 145 PKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELKVVNGAAASQPPSKRKRR 199
>BC015530-1|AAH15530.1| 496|Homo sapiens Unknown (protein for
IMAGE:3913474) protein.
Length = 496
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 41 PQVNSQQKKDETQVVHVTQKKVPSATEILEKAKA--LQKVKATIAQAAPRRRGRK 199
P++N++ D + H+T+++ ++ EKAKA L+ V A P +R R+
Sbjct: 145 PKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELKVVNGAAASQPPSKRKRR 199
>AL513218-4|CAI12283.1| 858|Homo sapiens coiled-coil and C2 domain
containing 1B protein.
Length = 858
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +2
Query: 83 VHVTQKKVPSATEILEKAKALQ---KVKATIAQAAPRRRGRK-RKSDLPPPHELLASP 244
+H ++ SA E E AKA + +K +Q A RRGRK + ++PPP L P
Sbjct: 174 IHNYREAAASAKEAGEAAKARRCERGLKTLESQLASVRRGRKINEDEIPPPVALGKRP 231
>AL513218-3|CAI12284.1| 852|Homo sapiens coiled-coil and C2 domain
containing 1B protein.
Length = 852
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +2
Query: 83 VHVTQKKVPSATEILEKAKALQ---KVKATIAQAAPRRRGRK-RKSDLPPPHELLASP 244
+H ++ SA E E AKA + +K +Q A RRGRK + ++PPP L P
Sbjct: 174 IHNYREAAASAKEAGEAAKARRCERGLKTLESQLASVRRGRKINEDEIPPPVALGKRP 231
>AL513218-2|CAI12282.1| 771|Homo sapiens coiled-coil and C2 domain
containing 1B protein.
Length = 771
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +2
Query: 83 VHVTQKKVPSATEILEKAKALQ---KVKATIAQAAPRRRGRK-RKSDLPPPHELLASP 244
+H ++ SA E E AKA + +K +Q A RRGRK + ++PPP L P
Sbjct: 114 IHNYREAAASAKEAGEAAKARRCERGLKTLESQLASVRRGRKINEDEIPPPVALGKRP 171
>AB058739-1|BAB47465.1| 718|Homo sapiens KIAA1836 protein protein.
Length = 718
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +2
Query: 83 VHVTQKKVPSATEILEKAKALQ---KVKATIAQAAPRRRGRK-RKSDLPPPHELLASP 244
+H ++ SA E E AKA + +K +Q A RRGRK + ++PPP L P
Sbjct: 34 IHNYREAAASAKEAGEAAKARRCERGLKTLESQLASVRRGRKINEDEIPPPVALGKRP 91
>AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility
associated gene 1 protein.
Length = 1844
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 92 TQKKVPSATEILEKAKAL--QKVKATIAQAAPRRRGRKRKSDLPPPHEL 232
T K + A +++EKAKAL + K T A P RR R LP +L
Sbjct: 696 TSKNISKAKQLIEKAKALHISRSKVTEEIAIPLRRS-SRHQTLPERKKL 743
>AK022797-1|BAB14248.1| 801|Homo sapiens protein ( Homo sapiens
cDNA FLJ12735 fis, clone NT2RP2000258, weakly similar to
ACTIVATOR 1 140 KD SUBUNIT. ).
Length = 801
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 92 TQKKVPSATEILEKAKAL--QKVKATIAQAAPRRRGRKRKSDLPPPHEL 232
T K + A +++EKAKAL + K T A P RR R LP +L
Sbjct: 293 TSKNISKAKQLIEKAKALHISRSKVTEEIAIPLRRS-SRHQTLPERKKL 340
>AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protein
protein.
Length = 1844
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 92 TQKKVPSATEILEKAKAL--QKVKATIAQAAPRRRGRKRKSDLPPPHEL 232
T K + A +++EKAKAL + K T A P RR R LP +L
Sbjct: 696 TSKNISKAKQLIEKAKALHISRSKVTEEIAIPLRRS-SRHQTLPERKKL 743
>BC053992-1|AAH53992.1| 1312|Homo sapiens SR-related CTD-associated
factor 1 protein.
Length = 1312
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 241 RGQQLVGRGEVALPLPAPPPGSRLGYGGLD 152
RG++ G G P PAPPP G D
Sbjct: 650 RGEKRSGDGSEKAPAPAPPPSGSTSCGDRD 679
>BC036884-1|AAH36884.1| 884|Homo sapiens ZNF462 protein protein.
Length = 884
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 269 CKMCPFKCNSIKEMSEHKAAIHGAA 343
C C F +I ++ EH +HG A
Sbjct: 463 CSWCSFSTMTISQLKEHSLKVHGKA 487
>BC033892-1|AAH33892.1| 257|Homo sapiens transmembrane protein 55A
protein.
Length = 257
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 173 AAPRRRGRKRKSDLPPPHELLASPNFK-LFLXACKMCPFKCNSIKEMSEH 319
A P + +++LPPP+ +ASP+ + + C++C N ++ +H
Sbjct: 25 APPYLQESSPRAELPPPYTAIASPDASGIPVINCRVCQSLINLDGKLHQH 74
>AL512593-2|CAI14942.1| 931|Homo sapiens zinc finger protein 462
protein.
Length = 931
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 269 CKMCPFKCNSIKEMSEHKAAIHGAA 343
C C F +I ++ EH +HG A
Sbjct: 510 CSWCSFSTMTISQLKEHSLKVHGKA 534
>AL512593-1|CAI14941.1| 1411|Homo sapiens zinc finger protein 462
protein.
Length = 1411
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 269 CKMCPFKCNSIKEMSEHKAAIHGAA 343
C C F +I ++ EH +HG A
Sbjct: 990 CSWCSFSTMTISQLKEHSLKVHGKA 1014
>AK027866-1|BAB55417.1| 1181|Homo sapiens protein ( Homo sapiens cDNA
FLJ14960 fis, clone PLACE4000192, weakly similar to ZINC
FINGER PROTEIN 142. ).
Length = 1181
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 269 CKMCPFKCNSIKEMSEHKAAIHGAA 343
C C F +I ++ EH +HG A
Sbjct: 990 CSWCSFSTMTISQLKEHSLKVHGKA 1014
>AK024444-1|BAB15734.1| 1343|Homo sapiens FLJ00034 protein protein.
Length = 1343
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 241 RGQQLVGRGEVALPLPAPPPGSRLGYGGLD 152
RG++ G G P PAPPP G D
Sbjct: 681 RGEKRSGDGSEKAPAPAPPPSGSTSCGDRD 710
>AJ556110-1|CAD88640.1| 121|Homo sapiens prostate apoptosis
response-4 protein.
Length = 121
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 271 ARXQEQLEVGRGQQLVGRGEVALPLPAP 188
AR + RGQ L G++ LPLPAP
Sbjct: 50 ARSRTPRGAARGQTLGSGGDLTLPLPAP 77
>AF254411-1|AAF87552.1| 1312|Homo sapiens ser/arg-rich pre-mRNA
splicing factor SR-A1 protein.
Length = 1312
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 241 RGQQLVGRGEVALPLPAPPPGSRLGYGGLD 152
RG++ G G P PAPPP G D
Sbjct: 650 RGEKRSGDGSEKAPAPAPPPSGSTSCGDRD 679
>AB108448-1|BAC99030.1| 121|Homo sapiens prostate apoptosis
response-4 protein.
Length = 121
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 271 ARXQEQLEVGRGQQLVGRGEVALPLPAP 188
AR + RGQ L G++ LPLPAP
Sbjct: 50 ARSRTPRGAARGQTLGSGGDLTLPLPAP 77
>AB058706-1|BAB47432.2| 1412|Homo sapiens KIAA1803 protein protein.
Length = 1412
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 269 CKMCPFKCNSIKEMSEHKAAIHGAA 343
C C F +I ++ EH +HG A
Sbjct: 991 CSWCSFSTMTISQLKEHSLKVHGKA 1015
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,515,211
Number of Sequences: 237096
Number of extensions: 969352
Number of successful extensions: 8752
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 8271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8740
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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