Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1115
         (620 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024932-1|ABE01162.1|  450|Drosophila melanogaster IP16425p pro...    28   8.9  
BT023163-1|AAY55579.1|  386|Drosophila melanogaster IP10810p pro...    28   8.9  
BT023091-1|AAY55507.1|  386|Drosophila melanogaster IP10910p pro...    28   8.9  
AY061312-1|AAL28860.1|  647|Drosophila melanogaster LD23155p pro...    28   8.9  
AE014297-4616|AAF57060.2|  386|Drosophila melanogaster CG15539-P...    28   8.9  
AE014297-4615|ABI31220.1|  509|Drosophila melanogaster CG15539-P...    28   8.9  
AE013599-3127|AAF46670.2|  647|Drosophila melanogaster CG4030-PA...    28   8.9  

>BT024932-1|ABE01162.1|  450|Drosophila melanogaster IP16425p
           protein.
          Length = 450

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 583 VPTPCVLTRDPXXPLKPSSARPINTLRKVQKSYSTTL 473
           +P P     +P  PL P + R   T +K QKS++  +
Sbjct: 409 IPAPPAAVGNPSVPLVPGAYRSQTTNKKYQKSFTAKI 445


>BT023163-1|AAY55579.1|  386|Drosophila melanogaster IP10810p
           protein.
          Length = 386

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +1

Query: 349 TIKLHIFQICDIILNYIYINMHLKICMYKVDILVDHVFCTILM*LNSFFELFV 507
           TI  H+    D I    ++ + LK  MY+ D  +++++  + M L  F+ELFV
Sbjct: 49  TIARHMVNYKDFIRAKEWLMVGLK--MYEADEEIEYIYSQLGMPLVDFYELFV 99


>BT023091-1|AAY55507.1|  386|Drosophila melanogaster IP10910p
           protein.
          Length = 386

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +1

Query: 349 TIKLHIFQICDIILNYIYINMHLKICMYKVDILVDHVFCTILM*LNSFFELFV 507
           TI  H+    D I    ++ + LK  MY+ D  +++++  + M L  F+ELFV
Sbjct: 49  TIARHMVNYKDFIRAKEWLMVGLK--MYEADEEIEYIYSQLGMPLVDFYELFV 99


>AY061312-1|AAL28860.1|  647|Drosophila melanogaster LD23155p
           protein.
          Length = 647

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -1

Query: 326 NADCGNKYHTLQEKMNLMSEGVNEDFLMIFQNL 228
           NAD   K  TLQE+++ M E V +DF+ + Q L
Sbjct: 513 NADYKTKIKTLQEELSTM-ETVQKDFVKLSQTL 544


>AE014297-4616|AAF57060.2|  386|Drosophila melanogaster CG15539-PA,
           isoform A protein.
          Length = 386

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +1

Query: 349 TIKLHIFQICDIILNYIYINMHLKICMYKVDILVDHVFCTILM*LNSFFELFV 507
           TI  H+    D I    ++ + LK  MY+ D  +++++  + M L  F+ELFV
Sbjct: 49  TIARHMVNYKDFIRAKEWLMVGLK--MYEADEEIEYIYSQLGMPLVDFYELFV 99


>AE014297-4615|ABI31220.1|  509|Drosophila melanogaster CG15539-PB,
           isoform B protein.
          Length = 509

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +1

Query: 349 TIKLHIFQICDIILNYIYINMHLKICMYKVDILVDHVFCTILM*LNSFFELFV 507
           TI  H+    D I    ++ + LK  MY+ D  +++++  + M L  F+ELFV
Sbjct: 172 TIARHMVNYKDFIRAKEWLMVGLK--MYEADEEIEYIYSQLGMPLVDFYELFV 222


>AE013599-3127|AAF46670.2|  647|Drosophila melanogaster CG4030-PA
           protein.
          Length = 647

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -1

Query: 326 NADCGNKYHTLQEKMNLMSEGVNEDFLMIFQNL 228
           NAD   K  TLQE+++ M E V +DF+ + Q L
Sbjct: 513 NADYKTKIKTLQEELSTM-ETVQKDFVKLSQTL 544


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,474,632
Number of Sequences: 53049
Number of extensions: 433164
Number of successful extensions: 898
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)