Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1114
         (600 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    27   0.35 
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    25   1.9  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    25   1.9  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   1.9  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   2.5  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   3.3  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    24   4.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   10.0 

>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 27.5 bits (58), Expect = 0.35
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = -3

Query: 166 GAGQHGAERVAAPPRLATQQQRARPGHAQQREAHDADR*QHPQVAESRDVVP 11
           G GQ  A     PP    ++  A+P   QQ++  +    + P+ + SR V+P
Sbjct: 193 GGGQPSASP-RQPPTPLPRRSSAQPQQQQQQQQRNQHEQEQPRASTSRAVMP 243


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +3

Query: 123 RGGAATRSAPCCPAP 167
           RGGAA R+AP  P P
Sbjct: 171 RGGAAIRTAPASPFP 185


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +3

Query: 123 RGGAATRSAPCCPAP 167
           RGGAA R+AP  P P
Sbjct: 176 RGGAAIRTAPASPFP 190


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -3

Query: 157 QHGAERVAAPPRLATQQQRARP-GHAQQREAHDADR*QHPQVAESRDVVP 11
           Q   ER   PP+L  Q+Q+ +P    QQR      + Q PQ   S+   P
Sbjct: 445 QQQGERY-VPPQLRQQRQQQQPQQQQQQRPQQQRPQQQRPQQQRSQQRKP 493


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 112 QQQRARPGHAQQREAHDADR*QHPQVAESRDVV 14
           QQQ+    H QQ + H + + Q P  + S D++
Sbjct: 255 QQQQHPSSHQQQSQQHPSSQHQQPSRSASIDLM 287


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 217  DVEGDVSEGSGDGVKQYGAG 158
            D  GD + GSGD   Q+G G
Sbjct: 2038 DDSGDGATGSGDNGSQHGGG 2057


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
 Frame = -3

Query: 229 VPYADVE-GDVSEGSGDGVKQYGAGQHGAERVAAPP 125
           VP A+   G      GD     GA +HG   +A PP
Sbjct: 181 VPGAEPSRGSTPPTPGDDSDSMGASRHGKTPLATPP 216


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 5/67 (7%)
 Frame = -3

Query: 211 EGDVSEGSGDGVKQYGAGQHGAERVAAPPRLATQQ-----QRARPGHAQQREAHDADR*Q 47
           +G +       +  YG G +G+  V        QQ     Q+  PGH+Q    H      
Sbjct: 134 QGSMMRAMPPELGMYGGGCYGSPPVPWYQLPQQQQPSSYHQQQHPGHSQHHHHHHHHHPH 193

Query: 46  HPQVAES 26
           H Q   S
Sbjct: 194 HSQQQHS 200


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,826
Number of Sequences: 2352
Number of extensions: 9458
Number of successful extensions: 34
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)