Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1114
         (600 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114567-1|AAI14568.1| 1132|Homo sapiens nuclear protein in test...    33   0.77 
BC114518-1|AAI14519.1| 1132|Homo sapiens nuclear protein in test...    33   0.77 
BC033392-1|AAH33392.2|  613|Homo sapiens NUT protein protein.          33   0.77 
AY166680-1|AAO22237.1| 1846|Homo sapiens BRD4-NUT fusion oncopro...    33   0.77 
AK098568-1|BAC05337.1|  442|Homo sapiens protein ( Homo sapiens ...    33   0.77 
AF482429-1|AAO39268.1| 1132|Homo sapiens testis nuclear protein ...    33   0.77 
AK098244-1|BAC05269.1|  584|Homo sapiens protein ( Homo sapiens ...    29   9.4  

>BC114567-1|AAI14568.1| 1132|Homo sapiens nuclear protein in testis
           protein.
          Length = 1132

 Score = 33.1 bits (72), Expect = 0.77
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -3

Query: 208 GDVSEGSGDGVKQYGAGQHGAERVAAPPRLATQQQRARPGHAQQREAHDADR*QH 44
           G V +  GDG  +   G  GA   A   ++++  +RAR  H  Q +A D+ R  H
Sbjct: 497 GSVEDEDGDGRLRPSPGLQGAGGAACLGKVSSSGKRAREVHGGQEQALDSPRGMH 551


>BC114518-1|AAI14519.1| 1132|Homo sapiens nuclear protein in testis
           protein.
          Length = 1132

 Score = 33.1 bits (72), Expect = 0.77
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -3

Query: 208 GDVSEGSGDGVKQYGAGQHGAERVAAPPRLATQQQRARPGHAQQREAHDADR*QH 44
           G V +  GDG  +   G  GA   A   ++++  +RAR  H  Q +A D+ R  H
Sbjct: 497 GSVEDEDGDGRLRPSPGLQGAGGAACLGKVSSSGKRAREVHGGQEQALDSPRGMH 551


>BC033392-1|AAH33392.2|  613|Homo sapiens NUT protein protein.
          Length = 613

 Score = 33.1 bits (72), Expect = 0.77
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -3

Query: 208 GDVSEGSGDGVKQYGAGQHGAERVAAPPRLATQQQRARPGHAQQREAHDADR*QH 44
           G V +  GDG  +   G  GA   A   ++++  +RAR  H  Q +A D+ R  H
Sbjct: 497 GSVEDEDGDGRLRPSPGLQGAGGAACLGKVSSSGKRAREVHGGQEQALDSPRGMH 551


>AY166680-1|AAO22237.1| 1846|Homo sapiens BRD4-NUT fusion oncoprotein
            protein.
          Length = 1846

 Score = 33.1 bits (72), Expect = 0.77
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -3

Query: 208  GDVSEGSGDGVKQYGAGQHGAERVAAPPRLATQQQRARPGHAQQREAHDADR*QH 44
            G V +  GDG  +   G  GA   A   ++++  +RAR  H  Q +A D+ R  H
Sbjct: 1211 GSVEDEDGDGRLRPSPGLQGAGGAACLGKVSSSGKRAREVHGGQEQALDSPRGMH 1265


>AK098568-1|BAC05337.1|  442|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25702 fis, clone TST04740. ).
          Length = 442

 Score = 33.1 bits (72), Expect = 0.77
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -3

Query: 208 GDVSEGSGDGVKQYGAGQHGAERVAAPPRLATQQQRARPGHAQQREAHDADR*QH 44
           G V +  GDG  +   G  GA   A   ++++  +RAR  H  Q +A D+ R  H
Sbjct: 366 GSVEDEDGDGRLRPSPGLQGAGGAACLGKVSSSGKRAREVHGGQEQALDSPRGMH 420


>AF482429-1|AAO39268.1| 1132|Homo sapiens testis nuclear protein
           protein.
          Length = 1132

 Score = 33.1 bits (72), Expect = 0.77
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -3

Query: 208 GDVSEGSGDGVKQYGAGQHGAERVAAPPRLATQQQRARPGHAQQREAHDADR*QH 44
           G V +  GDG  +   G  GA   A   ++++  +RAR  H  Q +A D+ R  H
Sbjct: 497 GSVEDEDGDGRLRPSPGLQGAGGAACLGKVSSSGKRAREVHGGQEQALDSPRGMH 551


>AK098244-1|BAC05269.1|  584|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40925 fis, clone UTERU2006486. ).
          Length = 584

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = -1

Query: 258 MHLSTVLFKLSRTRTLKAMYPREAATA*SNTAPDS-TALSAWRRPPASLPSSNALAQATH 82
           M LS+ +   SRT+T    +P   A +  +TAP S T LS+  +  + +P+S+    A  
Sbjct: 116 MQLSSRMQFTSRTQTNFKAWPSSRAQSSPSTAPSSGTQLSSGAQAGSEIPASSKTQTAAE 175

Query: 81  SRGRHTMLTASSILRLP 31
           ++    +  +S +   P
Sbjct: 176 TQPSSRIQLSSGVQSSP 192


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,597,345
Number of Sequences: 237096
Number of extensions: 1353138
Number of successful extensions: 3674
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3672
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)