Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1107
         (700 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   0.69 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   0.69 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   3.7  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    22   4.9  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   6.4  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   8.5  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    21   8.5  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   8.5  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 343 RLTNASTHHSPMENSIILSLVLNFMANHRQW 435
           RLT   T+H  +   +   LV N  AN + W
Sbjct: 63  RLTYGQTNHISLTLDLEYELVENLQANEKPW 93


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 343 RLTNASTHHSPMENSIILSLVLNFMANHRQW 435
           RLT   T+H  +   +   LV N  AN + W
Sbjct: 101 RLTYGQTNHISLTLDLEYELVENLQANEKPW 131


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = +3

Query: 171  PTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLALSEEGNQDGYDQTVD 350
            P P   +   T+   P   D+ ++D+ S      D+    P PL++S  G++D  D T D
Sbjct: 1364 PVPERPERVPTVDLSPSPSDRGRNDDGS------DRLTSPPTPLSISRAGSRD-EDSTRD 1416

Query: 351  Q-RFDSPQSNGELDN 392
              + D      E+ N
Sbjct: 1417 STKLDRSSREREVHN 1431


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 339 QTVDQRFDSPQSNGELDNLIIS 404
           Q +DQ+F  PQ N   DN   S
Sbjct: 124 QKLDQKFIFPQENNYNDNYFYS 145


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +2

Query: 50  DHILRDLFILFYCPSTILTDRDYVIIFPNRYYSGPCCQRS 169
           D I++ L I    P  ++  ++ V +  N  Y+G  CQ++
Sbjct: 87  DMIVKQLEITMP-PEEVVIGKEIVAVCRNEEYTGDDCQKT 125


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 464 TT*ERKRHKSRRGRC 508
           TT ++KRHK R  RC
Sbjct: 231 TTHQQKRHKLRVTRC 245


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 330 GYDQTVDQRFDSPQSNGELDNLIIS 404
           GYD +V   F  P +  E+D ++ S
Sbjct: 16  GYDNSVRPDFGGPPATVEVDIMVRS 40


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 317 FFAEGKRVRFQIVFVTLV 264
           FF+ GK+  +Q+ F+ +V
Sbjct: 2   FFSSGKQQVYQLFFIQIV 19


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 385 SIILSLVLNFMANHRQWKD 441
           SI   L+LN   NH +W D
Sbjct: 547 SIASLLLLNLSENHIEWFD 565


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,904
Number of Sequences: 438
Number of extensions: 3804
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)