Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1106
         (630 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL589733-1|CAI12327.1|  384|Homo sapiens kinesin family member 2...    33   1.1  
AB012723-1|BAA36418.1|  384|Homo sapiens kinesin-like protein pr...    33   1.1  
AB012722-1|BAA36417.1|  384|Homo sapiens kinesin-like protein pr...    33   1.1  
BC130489-1|AAI30490.1|  332|Homo sapiens KIF25 protein protein.        31   4.5  
AL589733-2|CAI12328.1|  169|Homo sapiens kinesin family member 2...    31   4.5  

>AL589733-1|CAI12327.1|  384|Homo sapiens kinesin family member 25
           protein.
          Length = 384

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 19/49 (38%), Positives = 30/49 (61%)
 Frame = +2

Query: 260 LLSKALGVDFILIVIICVNVSPKYGSDTLINLGYCLRSLVSTFLQRTPA 406
           LL   LG D  L+VI+C++ S ++ + TL  LG+ +R   +  +QR PA
Sbjct: 323 LLQDCLGGDAKLLVILCISPSQRHLAQTLQGLGFGIR---ARQVQRGPA 368


>AB012723-1|BAA36418.1|  384|Homo sapiens kinesin-like protein
           protein.
          Length = 384

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 19/49 (38%), Positives = 30/49 (61%)
 Frame = +2

Query: 260 LLSKALGVDFILIVIICVNVSPKYGSDTLINLGYCLRSLVSTFLQRTPA 406
           LL   LG D  L+VI+C++ S ++ + TL  LG+ +R   +  +QR PA
Sbjct: 323 LLQDCLGGDAKLLVILCISPSQRHLAQTLQGLGFGIR---ARQVQRGPA 368


>AB012722-1|BAA36417.1|  384|Homo sapiens kinesin-like protein
           protein.
          Length = 384

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 19/49 (38%), Positives = 30/49 (61%)
 Frame = +2

Query: 260 LLSKALGVDFILIVIICVNVSPKYGSDTLINLGYCLRSLVSTFLQRTPA 406
           LL   LG D  L+VI+C++ S ++ + TL  LG+ +R   +  +QR PA
Sbjct: 323 LLQDCLGGDAKLLVILCISPSQRHLAQTLQGLGFGIR---ARQVQRGPA 368


>BC130489-1|AAI30490.1|  332|Homo sapiens KIF25 protein protein.
          Length = 332

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 17/47 (36%), Positives = 30/47 (63%)
 Frame = +2

Query: 266 SKALGVDFILIVIICVNVSPKYGSDTLINLGYCLRSLVSTFLQRTPA 406
           S+ +G D  L+VI+C++ S ++ + TL  LG+ +R   +  +QR PA
Sbjct: 273 SECVGGDAKLLVILCISPSQRHLAQTLQGLGFGIR---ARQVQRGPA 316


>AL589733-2|CAI12328.1|  169|Homo sapiens kinesin family member 25
           protein.
          Length = 169

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 17/47 (36%), Positives = 30/47 (63%)
 Frame = +2

Query: 266 SKALGVDFILIVIICVNVSPKYGSDTLINLGYCLRSLVSTFLQRTPA 406
           S+ +G D  L+VI+C++ S ++ + TL  LG+ +R   +  +QR PA
Sbjct: 110 SECVGGDAKLLVILCISPSQRHLAQTLQGLGFGIR---ARQVQRGPA 153


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,063,778
Number of Sequences: 237096
Number of extensions: 1430030
Number of successful extensions: 5895
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5895
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)