Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1104
(450 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 204 4e-54
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 200 1e-52
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 173 8e-45
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 161 3e-41
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 111 5e-26
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 69 3e-13
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 55 4e-09
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 36 0.003
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 30 0.14
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.44
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 4.1
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 25 4.1
SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|... 25 5.4
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr... 25 7.1
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 25 7.1
SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 7.1
SPCC1682.13 |||SWIRM domain protein|Schizosaccharomyces pombe|ch... 24 9.4
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 204 bits (499), Expect = 4e-54
Identities = 94/124 (75%), Positives = 107/124 (86%)
Frame = +3
Query: 24 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 203
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 204 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVXXWCLR 383
TIFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+ L
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLM 123
Query: 384 K*RK 395
K R+
Sbjct: 124 KMRE 127
Score = 37.1 bits (82), Expect = 0.001
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +2
Query: 371 MVLTKMKETAEAYLGXTVQNAAITV 445
MVL KM+ETAEAYLG V +A +TV
Sbjct: 120 MVLMKMRETAEAYLGGKVTDAVVTV 144
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 200 bits (487), Expect = 1e-52
Identities = 92/124 (74%), Positives = 105/124 (84%)
Frame = +3
Query: 24 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 203
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 204 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVXXWCLR 383
TIFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+ L
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLL 123
Query: 384 K*RK 395
K R+
Sbjct: 124 KMRE 127
Score = 33.9 bits (74), Expect = 0.012
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 371 MVLTKMKETAEAYLGXTVQNAAITV 445
MVL KM+E+AEA+LG V +A +TV
Sbjct: 120 MVLLKMRESAEAFLGGKVTDAVVTV 144
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 173 bits (422), Expect = 8e-45
Identities = 78/125 (62%), Positives = 97/125 (77%)
Frame = +3
Query: 24 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 203
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 204 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVXXWCLR 383
T+FDAKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+ L
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLT 127
Query: 384 K*RKL 398
K +++
Sbjct: 128 KMKEI 132
Score = 32.3 bits (70), Expect = 0.035
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +2
Query: 371 MVLTKMKETAEAYLGXTVQNAAITV 445
MVLTKMKE +EA L V+ A ITV
Sbjct: 124 MVLTKMKEISEAKLNKRVEKAVITV 148
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 161 bits (392), Expect = 3e-41
Identities = 73/120 (60%), Positives = 92/120 (76%)
Frame = +3
Query: 27 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 206
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 207 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVXXWCLRK 386
IFD KRLIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+ L K
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSK 157
Score = 37.5 bits (83), Expect = 0.001
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +2
Query: 371 MVLTKMKETAEAYLGXTVQNAAITV 445
M+L+KMK+TAEAYLG V +A +TV
Sbjct: 153 MILSKMKQTAEAYLGKPVTHAVVTV 177
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 111 bits (267), Expect = 5e-26
Identities = 56/128 (43%), Positives = 79/128 (61%), Gaps = 1/128 (0%)
Frame = +3
Query: 15 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 191
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 192 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVXX 371
NP NT F KRLIGR+F++ VQ D+K P+++V + KT+ P ++
Sbjct: 109 NPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNG---DAWLEARGKTYSPSQIGG 165
Query: 372 WCLRK*RK 395
+ L K R+
Sbjct: 166 FILSKMRE 173
Score = 34.7 bits (76), Expect = 0.007
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 374 VLTKMKETAEAYLGXTVQNAAITV 445
+L+KM+ETA YLG V+NA +TV
Sbjct: 167 ILSKMRETASTYLGKDVKNAVVTV 190
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 69.3 bits (162), Expect = 3e-13
Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = +3
Query: 12 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 191
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 192 NPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTF 350
N NT+ KRL GR ++D ++ + ++ G KV Y E+ F
Sbjct: 63 NFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAF 116
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 55.2 bits (127), Expect = 4e-09
Identities = 29/112 (25%), Positives = 60/112 (53%)
Frame = +3
Query: 27 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 206
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N +N+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86
Query: 207 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEE 362
+ + + L+G+ ++ T+ H+ V+ G+ K+ + ED+ P+E
Sbjct: 87 VTNFRDLLGKSHDELTLH--HCHYSANPVNVEGQIGFKITVQ-EDEESDPKE 135
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 35.9 bits (79), Expect = 0.003
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +3
Query: 27 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 203
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P +
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAH 84
Query: 204 TIFDAKRLIGRK-FEDATVQADMKHWP 281
+I + K L+ E VQ +P
Sbjct: 85 SIRNVKELLDTAGLESVLVQKYQSSYP 111
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 30.3 bits (65), Expect = 0.14
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +3
Query: 132 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKP 311
+ F+D E GD A + P + AK L+G+ + + D P++V+ D P
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYDRLGP 184
Query: 312 KIKVAYKGEDKTFFPE 359
+K+ G + F +
Sbjct: 185 -LKLMIDGTVRNFIAQ 199
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.44
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 19 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 114
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 4.1
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 5 QNGKSTRSRNRSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPG 184
+NGK T +R +S + W P++E R G D + V R + + +EP
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE----RSSNGNSDSASPPPVPRLSITRSQVSREP- 531
Query: 185 GDEPQQ 202
++P++
Sbjct: 532 -EKPEE 536
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 4.1
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -1
Query: 105 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCI 1
G W SP S + H ++++ +F +RVL C+
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCM 310
>SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 330
Score = 25.0 bits (52), Expect = 5.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -2
Query: 335 TLICYLDLRFASITDNLERPVLHVGLHSSIFELTSDETFGI 213
T I L + S+TDN+ER + +G + I +TS F +
Sbjct: 142 TNIALLLATYPSVTDNIER-FIFMGGSTGIGNITSQAEFNV 181
>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 455
Score = 24.6 bits (51), Expect = 7.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 305 ASITDNLERPVLHVGLHSS 249
A + NL RP+ H LHSS
Sbjct: 408 APVIRNLPRPIYHQDLHSS 426
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 24.6 bits (51), Expect = 7.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 30 GIDLGTTYSCVGVFQHGKVEIIANDQGNR 116
G LG TY+ V Q G VE+ D N+
Sbjct: 1279 GCFLGNTYAFASVTQDGSVEVHRLDVNNQ 1307
>SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 475
Score = 24.6 bits (51), Expect = 7.1
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 330 KGEDKTFFPEEVXXWCLRK*RKLPK 404
K + + + P V W LRK + +PK
Sbjct: 67 KSKSEDYQPSNVNVWALRKEKMIPK 91
>SPCC1682.13 |||SWIRM domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 272
Score = 24.2 bits (50), Expect = 9.4
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 40 WVPRTLALVSSSTGRWRSSPTTRATGP-LRLMLRSQTPSVSS 162
W R + SSS R RSS ++R + P LRS S+SS
Sbjct: 90 WANRHSNVSSSSGSRGRSSVSSRDSSPSYSGALRSAERSISS 131
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,932,481
Number of Sequences: 5004
Number of extensions: 38612
Number of successful extensions: 128
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 166231220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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