Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1104
(450 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 217 3e-57
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 216 7e-57
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 188 2e-48
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 188 2e-48
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 184 2e-47
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 171 2e-43
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 171 2e-43
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 170 3e-43
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 100 4e-22
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 100 1e-21
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 99 1e-21
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 99 1e-21
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 84 4e-17
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 83 1e-16
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 48 3e-06
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 48 3e-06
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z82059-2|CAB04876.3| 557|Caenorhabditis elegans Hypothetical pr... 27 4.8
U41007-6|AAA82269.2| 348|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical pr... 27 6.3
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 27 6.3
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 27 8.3
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 27 8.3
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 27 8.3
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 27 8.3
AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical ... 27 8.3
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 217 bits (530), Expect = 3e-57
Identities = 101/130 (77%), Positives = 114/130 (87%), Gaps = 1/130 (0%)
Frame = +3
Query: 9 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 188
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 189 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 365
MNP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 366 XXWCLRK*RK 395
L K +K
Sbjct: 121 SSMVLLKMKK 130
Score = 35.1 bits (77), Expect = 0.024
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +2
Query: 371 MVLTKMKETAEAYLGXTVQNAAITV 445
MVL KMK+TAEA+L TV++A +TV
Sbjct: 123 MVLLKMKKTAEAFLEPTVKDAVVTV 147
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 216 bits (527), Expect = 7e-57
Identities = 100/127 (78%), Positives = 112/127 (88%), Gaps = 1/127 (0%)
Frame = +3
Query: 9 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 188
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 189 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 365
MNP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 366 XXWCLRK 386
L K
Sbjct: 121 SSMVLLK 127
Score = 39.9 bits (89), Expect = 8e-04
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +2
Query: 371 MVLTKMKETAEAYLGXTVQNAAITV 445
MVL KMKETAEA+LG TV++A +TV
Sbjct: 123 MVLLKMKETAEAFLGTTVKDAVVTV 147
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 188 bits (458), Expect = 2e-48
Identities = 83/126 (65%), Positives = 103/126 (81%)
Frame = +3
Query: 9 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 188
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 189 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVX 368
NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEIS 120
Query: 369 XWCLRK 386
L+K
Sbjct: 121 AMVLQK 126
Score = 40.3 bits (90), Expect = 6e-04
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +2
Query: 371 MVLTKMKETAEAYLGXTVQNAAITV 445
MVL KMKETAE YLG TV++A ITV
Sbjct: 122 MVLQKMKETAETYLGHTVKDAVITV 146
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 188 bits (458), Expect = 2e-48
Identities = 83/126 (65%), Positives = 103/126 (81%)
Frame = +3
Query: 9 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 188
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 189 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVX 368
NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEIS 120
Query: 369 XWCLRK 386
L+K
Sbjct: 121 AMVLQK 126
Score = 40.3 bits (90), Expect = 6e-04
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +2
Query: 371 MVLTKMKETAEAYLGXTVQNAAITV 445
MVL KMKETAE YLG TV++A ITV
Sbjct: 122 MVLQKMKETAETYLGHTVKDAVITV 146
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 184 bits (449), Expect = 2e-47
Identities = 81/126 (64%), Positives = 102/126 (80%)
Frame = +3
Query: 9 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 188
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 189 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVX 368
NP NT+FDAKRLIGR+F++ TVQ+D+KHWPF V GKP ++V KGE + F EE+
Sbjct: 61 RNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEIS 120
Query: 369 XWCLRK 386
L+K
Sbjct: 121 AMVLQK 126
Score = 37.1 bits (82), Expect = 0.006
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +2
Query: 371 MVLTKMKETAEAYLGXTVQNAAITV 445
MVL KMKETAEA LG +V++A ITV
Sbjct: 122 MVLQKMKETAEAVLGHSVRDAVITV 146
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 171 bits (416), Expect = 2e-43
Identities = 79/126 (62%), Positives = 99/126 (78%), Gaps = 2/126 (1%)
Frame = +3
Query: 27 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTE--RLIGDAAKNQVAMNPN 200
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ + RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 201 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVXXWCL 380
NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEV L
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMVL 155
Query: 381 RK*RKL 398
K +++
Sbjct: 156 VKMKEI 161
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +2
Query: 371 MVLTKMKETAEAYLGXTVQNAAITV 445
MVL KMKE AE+YLG V+NA +TV
Sbjct: 153 MVLVKMKEIAESYLGKEVKNAVVTV 177
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 171 bits (416), Expect = 2e-43
Identities = 79/126 (62%), Positives = 99/126 (78%), Gaps = 2/126 (1%)
Frame = +3
Query: 27 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTE--RLIGDAAKNQVAMNPN 200
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ + RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 201 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVXXWCL 380
NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEV L
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMVL 155
Query: 381 RK*RKL 398
K +++
Sbjct: 156 VKMKEI 161
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +2
Query: 371 MVLTKMKETAEAYLGXTVQNAAITV 445
MVL KMKE AE+YLG V+NA +TV
Sbjct: 153 MVLVKMKEIAESYLGKEVKNAVVTV 177
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 170 bits (414), Expect = 3e-43
Identities = 80/126 (63%), Positives = 97/126 (76%), Gaps = 2/126 (1%)
Frame = +3
Query: 27 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT--ERLIGDAAKNQVAMNPN 200
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ +NP
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPE 92
Query: 201 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVXXWCL 380
NTIFDAKRLIGR + + TVQ D+KHWPF++V KP ++V E K F PEEV L
Sbjct: 93 NTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSAMVL 152
Query: 381 RK*RKL 398
K +++
Sbjct: 153 TKMKQI 158
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2
Query: 371 MVLTKMKETAEAYLGXTVQNAAITV 445
MVLTKMK+ AE+YLG V+NA +TV
Sbjct: 150 MVLTKMKQIAESYLGHEVKNAVVTV 174
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 100 bits (240), Expect = 4e-22
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 2/126 (1%)
Frame = +3
Query: 15 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 191
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 192 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVX 368
N NT+F KRLIGR++ED VQ D+K P+++V + G + + + K + P +V
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWV----EAQGKVYSPSQVG 145
Query: 369 XWCLRK 386
+ L K
Sbjct: 146 AFVLMK 151
Score = 39.9 bits (89), Expect = 8e-04
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +2
Query: 374 VLTKMKETAEAYLGXTVQNAAITV 445
VL KMKETAE+YLG TV NA +TV
Sbjct: 148 VLMKMKETAESYLGTTVNNAVVTV 171
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 99.5 bits (237), Expect = 1e-21
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 2/126 (1%)
Frame = +3
Query: 15 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 191
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 192 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVX 368
N NT+F KRLIGR++ED VQ D+K P+++V + G + + + K + P +V
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWV----EAQGKEYPPSQVG 145
Query: 369 XWCLRK 386
+ L K
Sbjct: 146 AFVLMK 151
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +2
Query: 374 VLTKMKETAEAYLGXTVQNAAITV 445
VL KMKETAE+YLG TV N +TV
Sbjct: 148 VLMKMKETAESYLGTTVNNPVVTV 171
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 99.1 bits (236), Expect = 1e-21
Identities = 49/107 (45%), Positives = 73/107 (68%), Gaps = 2/107 (1%)
Frame = +3
Query: 24 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 200
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIG-KAT 60
Query: 201 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGE 338
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ +K E
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEI-HKNE 106
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 99.1 bits (236), Expect = 1e-21
Identities = 49/107 (45%), Positives = 73/107 (68%), Gaps = 2/107 (1%)
Frame = +3
Query: 24 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 200
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIG-KAT 60
Query: 201 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGE 338
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ +K E
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEI-HKNE 106
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 84.2 bits (199), Expect = 4e-17
Identities = 48/118 (40%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
Frame = +3
Query: 30 GIDLGTTYSCVGVFQH--GKVEIIANDQGNRTTPSYVAFTDTER-LIGDAAKNQVAMNPN 200
GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG A Q NP
Sbjct: 37 GIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIGTRATEQQEHNPK 96
Query: 201 NTIFDAKRLIGRKFE--DATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEV 365
TI+DAKR IGR FE + +D K +PF++ D GK ++ K +PEE+
Sbjct: 97 RTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEEI 154
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 82.6 bits (195), Expect = 1e-16
Identities = 46/125 (36%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Frame = +3
Query: 27 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 206
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V N NT
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTNIKNT 63
Query: 207 IFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVXXWCLR 383
+ + K LIGRKF D Q + P +VV ++V+Y GE TF PE+V L
Sbjct: 64 VINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAALLT 123
Query: 384 K*RKL 398
K R +
Sbjct: 124 KLRTI 128
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 48.0 bits (109), Expect = 3e-06
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Frame = +3
Query: 12 AKAPAVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 188
A A+ IDLG+ + +G+ + G ++I+ N + R TP+ ++F + ER +AA +
Sbjct: 8 AALAAMSIDLGSQFIKIGLVKPGVPMDIVLNKESRRKTPNVISFKNDERFFAEAAAAMSS 67
Query: 189 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGE 338
+P ++ +I RK D K +PF D + + YK E
Sbjct: 68 SHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYKEE 118
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 48.0 bits (109), Expect = 3e-06
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Frame = +3
Query: 12 AKAPAVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 188
A A+ IDLG+ + +G+ + G ++I+ N + R TP+ ++F + ER +AA +
Sbjct: 24 AALAAMSIDLGSQFIKIGLVKPGVPMDIVLNKESRRKTPNVISFKNDERFFAEAAAAMSS 83
Query: 189 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGE 338
+P ++ +I RK D K +PF D + + YK E
Sbjct: 84 SHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYKEE 134
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 42.3 bits (95), Expect = 2e-04
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Frame = +3
Query: 24 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 200
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA P+
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAAIGMQVRYPH 85
Query: 201 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYK--GEDKT 347
L+G+ + + + + F V D K + +K GE T
Sbjct: 86 LVHGQLNDLVGKSTQHPSFELFKRRNTFFEVDDAPKNASSINFKLGGESYT 136
>Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical
protein T08G11.2 protein.
Length = 282
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 116 DHSVLCCVHRHRASHRRCRQEPGGDEPQQHNI 211
D V+CCVH R S+ + Q+ D+ Q N+
Sbjct: 23 DGEVVCCVHGRRCSYGKGNQDGKRDDNQYVNL 54
>Z82059-2|CAB04876.3| 557|Caenorhabditis elegans Hypothetical
protein T27E9.5 protein.
Length = 557
Score = 27.5 bits (58), Expect = 4.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 404 LRQFPSFS*APXXDFLGKKGFVFTLICYLDL 312
+RQF FS P +G + +VF +IC L+L
Sbjct: 439 IRQFYVFSTDPLTRRVGMQSWVFVVICVLEL 469
>U41007-6|AAA82269.2| 348|Caenorhabditis elegans Hypothetical
protein C33H5.10 protein.
Length = 348
Score = 27.5 bits (58), Expect = 4.8
Identities = 18/69 (26%), Positives = 25/69 (36%)
Frame = +2
Query: 23 RSRNRSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPGGDEPQQ 202
R R +S H L P GG + G + S H H + RQ+ D P+
Sbjct: 252 RERTKSKQHPLSIMDAPKDRGGRTEEMVGVKQESFRQQQHTFDRQHSQNRQKSTFDRPKT 311
Query: 203 HNIRCQTSH 229
H + H
Sbjct: 312 HEEQVLEQH 320
>Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical
protein T09B9.5 protein.
Length = 363
Score = 27.1 bits (57), Expect = 6.3
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 115 LLPWSLAMISTFPCWKTPTQEY-VVPRSIPTAGAFA 11
+LP A TFPC + EY +VP +P+A A
Sbjct: 287 VLPMRDAATRTFPCMLSALPEYSLVPPQVPSASTSA 322
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 177 protein.
Length = 1667
Score = 27.1 bits (57), Expect = 6.3
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 317 DLRFASITDNLERPVLHVGLHSSIFELTSDETFGIEY 207
DLR +S L PVL +H+ FEL+S + I Y
Sbjct: 81 DLRSSSDKVLLRLPVLKQEVHNISFELSSSDVLAIMY 117
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical protein
F29G6.3c protein.
Length = 1453
Score = 26.6 bits (56), Expect = 8.3
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +2
Query: 89 DHRQRPGQQDHSVLCCVHRHRASHRRCRQ 175
+H Q+ + H+ + VH H +H+ RQ
Sbjct: 1107 EHHQKHVHEQHNYIPAVHHHETNHQLDRQ 1135
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical protein
F29G6.3b protein.
Length = 1785
Score = 26.6 bits (56), Expect = 8.3
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +2
Query: 89 DHRQRPGQQDHSVLCCVHRHRASHRRCRQ 175
+H Q+ + H+ + VH H +H+ RQ
Sbjct: 1107 EHHQKHVHEQHNYIPAVHHHETNHQLDRQ 1135
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 161 RRCRQEPGGDEPQQHNIRCQTS 226
R + P GDEP+QH I +T+
Sbjct: 4602 REVYESPEGDEPEQHYIETKTT 4623
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 161 RRCRQEPGGDEPQQHNIRCQTS 226
R + P GDEP+QH I +T+
Sbjct: 4602 REVYESPEGDEPEQHYIETKTT 4623
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 373 HXLTSSGKKVLSSPLYATLILGLPPSLTTS 284
H +SS +SSP Y T + LPPS + S
Sbjct: 1102 HVRSSSSHSQVSSPTYKTPQIQLPPSSSAS 1131
>AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical
protein Y51A2D.8 protein.
Length = 386
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1
Query: 69 RHQRKSTWYPDRFLLR 22
RH+R+ST YPD F LR
Sbjct: 139 RHKRRSTRYPDYFDLR 154
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,988,178
Number of Sequences: 27780
Number of extensions: 231665
Number of successful extensions: 699
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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