Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1102
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX640878-1|CAE45935.1|  664|Homo sapiens hypothetical protein pr...    30   9.1  

>BX640878-1|CAE45935.1|  664|Homo sapiens hypothetical protein
           protein.
          Length = 664

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
 Frame = +1

Query: 82  ERNPCLWNVGCSNYQNKTQRDLAWEDICKRIIPHWNDLNMEDRK-QIREYKKKQWNNVRD 258
           E NP   + G   + N     L+W+   +R  P  + LN +D   +I +   K     RD
Sbjct: 225 ELNPLGLDEGAPRHSN-----LSWQSQTRRT-PSLSSLNSQDSSIEISKLTDKVQAEYRD 278

Query: 259 GYRKYLNRNKNTSGAQKKIHIRG*STVLTTH 351
            YR+Y+ +     G      I G S+  +T+
Sbjct: 279 AYREYIAQMSQLEGGPGSTTISGRSSPHSTY 309


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,866,335
Number of Sequences: 237096
Number of extensions: 1824439
Number of successful extensions: 3484
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3484
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)