Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1099
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    27   0.75 
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    27   0.75 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   7.0  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    23   7.0  

>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 26.6 bits (56), Expect = 0.75
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 623 IIPLPSCSQDVQPLENRW 676
           ++P P+ S D+ P+EN W
Sbjct: 185 VLPWPALSPDLNPIENLW 202


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 26.6 bits (56), Expect = 0.75
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 623 IIPLPSCSQDVQPLENRW 676
           ++P P+ S D+ P+EN W
Sbjct: 257 VLPWPALSPDLNPIENLW 274


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +2

Query: 242 NMFIIYLSRDNVGIHYNNILTQSK 313
           N   ++ +  N+G+H NN+L  ++
Sbjct: 488 NAHSVHAANSNMGLHLNNLLCDAE 511


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 399 KHEIIFQQFQYITYKKNIKM 340
           KH  +F Q   +TY++ +K+
Sbjct: 664 KHNAVFDQLDLVTYEEVVKV 683


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,041
Number of Sequences: 2352
Number of extensions: 11337
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)