Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1095
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024746-15|AAF60409.1| 168|Caenorhabditis elegans Hypothetical... 167 6e-42
AL117203-11|CAB55116.1| 126|Caenorhabditis elegans Hypothetical... 48 5e-06
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 41 0.001
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 41 0.001
AL034392-2|CAA22305.1| 120|Caenorhabditis elegans Hypothetical ... 38 0.010
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 35 0.054
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 35 0.054
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 0.66
U80842-9|AAB37945.2| 258|Caenorhabditis elegans Hypothetical pr... 31 0.66
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 31 0.66
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 29 2.7
AC087082-1|AAG37982.2| 157|Caenorhabditis elegans Hypothetical ... 29 4.7
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 28 6.2
U41105-15|AAT81191.1| 298|Caenorhabditis elegans Hypothetical p... 28 8.1
U41105-14|AAA82408.2| 399|Caenorhabditis elegans Hypothetical p... 28 8.1
>AC024746-15|AAF60409.1| 168|Caenorhabditis elegans Hypothetical
protein Y110A2AL.13 protein.
Length = 168
Score = 167 bits (407), Expect = 6e-42
Identities = 86/169 (50%), Positives = 110/169 (65%), Gaps = 10/169 (5%)
Frame = +1
Query: 64 LPEGWEARKSRSTGMTYYLNKHTKKSQWEKPGGPASXXXXXXXXXXGGIPKEVRCSHLLV 243
LP GWE R+SRS YY N T +SQWE+P A G K V+C HLLV
Sbjct: 6 LPAGWEKRQSRSNDRVYYFNTATGRSQWERPDESA--------FGKGSELKSVQCLHLLV 57
Query: 244 KHSGSRRPSSWREEHITRTKEEALDILQE-------YRRKIIDR---EAKFEELASTYSD 393
KH GSR PSSWR +HITR+K++A++IL+ Y +++ D E KF ELA +SD
Sbjct: 58 KHDGSRNPSSWRSDHITRSKDDAINILKSADLRNFHYEKELKDASNIEGKFRELAKQFSD 117
Query: 394 CSSAKRDGDLGRFKKGQMQKPFEDVAFSLKIGQLSQPVHTDSGIHIILR 540
CSSAKR GDLG F++ QMQKPFED +F+L+IG++S V T SG+H+I R
Sbjct: 118 CSSAKRGGDLGPFERRQMQKPFEDASFALEIGEMSDIVDTSSGVHLIYR 166
>AL117203-11|CAB55116.1| 126|Caenorhabditis elegans Hypothetical
protein Y48C3A.16 protein.
Length = 126
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +1
Query: 361 KFEELASTYSDCSSAKRDGDLGRFKKGQMQKPFEDVAFSLKIGQLSQPVHTD 516
KF E+A+ YS+ A+ GDLG +G M PF+D AF+L +P++TD
Sbjct: 58 KFNEVAAQYSE-DKARSGGDLGWMTRGSMVGPFQDAAFALSNSSCDKPIYTD 108
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 16 FPAQRTNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 156
F Q+ N A LPEGWE R+ +T Y++N + +QWE P
Sbjct: 310 FLLQQNNFSADDPLGPLPEGWEKRQDPNTSRMYFVNHVNRTTQWEDP 356
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1
Query: 43 ASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 156
A+ EE LP+GWE R + G YY++ TK + WE+P
Sbjct: 214 AAGAEEQLPDGWEMRFDQY-GRKYYVDHTTKSTTWERP 250
Score = 35.5 bits (78), Expect = 0.041
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 31 TNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 156
T + STQ LP+GWE R+ G YY++ +T+ + W++P
Sbjct: 246 TWERPSTQP--LPQGWEMRRD-PRGRVYYVDHNTRTTTWQRP 284
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 16 FPAQRTNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 156
F Q+ N A LPEGWE R+ +T Y++N + +QWE P
Sbjct: 310 FLLQQNNFSADDPLGPLPEGWEKRQDPNTSRMYFVNHVNRTTQWEDP 356
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1
Query: 43 ASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 156
A+ EE LP+GWE R + G YY++ TK + WE+P
Sbjct: 214 AAGAEEQLPDGWEMRFDQY-GRKYYVDHTTKSTTWERP 250
Score = 35.5 bits (78), Expect = 0.041
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 31 TNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 156
T + STQ LP+GWE R+ G YY++ +T+ + W++P
Sbjct: 246 TWERPSTQP--LPQGWEMRRD-PRGRVYYVDHNTRTTTWQRP 284
>AL034392-2|CAA22305.1| 120|Caenorhabditis elegans Hypothetical
protein Y40B1A.2 protein.
Length = 120
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 73 GWEARKSRSTGMTYYLNKHTKKSQWEKPG-GPASXXXXXXXXXXGGIPKEVR 225
GW + S S+G YY NK T+ SQW+KP PA GG+ ++ R
Sbjct: 10 GWTEQMS-SSGKMYYYNKKTEISQWDKPAEWPAEGGSAERDKPKGGVNEKPR 60
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 1 KNLLAFPAQRTNDMASTQEEILPEG---WEARKSRSTGMTYYLNKHTKKSQWEKP 156
K + +R N+ + ++E L + W KS + G TYY NK TK++QW P
Sbjct: 1324 KEAIKAACRRANEEEAKRQEALAKTKYVWAIAKSEA-GETYYYNKITKETQWTAP 1377
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 1 KNLLAFPAQRTNDMASTQEEILPEG---WEARKSRSTGMTYYLNKHTKKSQWEKP 156
K + +R N+ + ++E L + W KS + G TYY NK TK++QW P
Sbjct: 1338 KEAIKAACRRANEEEAKRQEALAKTKYVWAIAKSEA-GETYYYNKITKETQWTAP 1391
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 34 NDMASTQEEILPEG----WEARKSRSTGMTYYLNKHTKKSQWEKP 156
+D T E L + W+ S+S + YY+ + ++K+QWE P
Sbjct: 3035 SDFGPTSEHFLNQSVTLPWQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 34 NDMASTQEEILPEG----WEARKSRSTGMTYYLNKHTKKSQWEKP 156
+D T E L + W+ S+S + YY+ + ++K+QWE P
Sbjct: 3035 SDFGPTSEHFLNQSVTLPWQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>U80842-9|AAB37945.2| 258|Caenorhabditis elegans Hypothetical
protein ZC239.6 protein.
Length = 258
Score = 31.5 bits (68), Expect = 0.66
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 313 LDILQEYRRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKGQMQKPFEDV 468
+D+ QEY +++ REA+F L DC A D+G + + P D+
Sbjct: 61 VDLPQEYLNQLL-REARFYGLVKLVRDCEQAIARLDVGSGRPSERADPLSDI 111
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 34 NDMASTQEEILPEG----WEARKSRSTGMTYYLNKHTKKSQWEKP 156
+D T E L + W+ S+S + YY+ + ++K+QWE P
Sbjct: 3035 SDFGPTSEHFLNQSVTLPWQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 31.1 bits (67), Expect = 0.87
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 64 LPEGWEARKSRSTGMTYYLNKHTKKSQWEKPGG 162
LP GWE ++ G T+Y++ +K+Q+E+P G
Sbjct: 332 LPPGWEQVDDQNYG-TFYVDHINRKTQYERPYG 363
>Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical
protein ZK1098.1 protein.
Length = 724
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1
Query: 103 GMTYYLNKHTKKSQWEKPGG 162
G YY N TKK+QW KP G
Sbjct: 137 GKPYYYNTLTKKTQWVKPDG 156
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 328 EYRRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKGQ-MQKPFEDVAFSLKIGQLSQP 504
E R+K I+ + K EE D A+RD + R K+ + ++K + +K +
Sbjct: 205 EARKKYIETQKKAEENEEKRRDAQKAERDAHIARHKQAEALEKEKREQEEKMKKEDRERA 264
Query: 505 VHTDSGIHI 531
D HI
Sbjct: 265 TQKDRSDHI 273
>AC087082-1|AAG37982.2| 157|Caenorhabditis elegans Hypothetical
protein Y92H12BM.1 protein.
Length = 157
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 76 WEARKSRSTGMTYYLNKHTKKSQWEKPGG 162
WE S+ TG YY N + ++W+KP G
Sbjct: 9 WELFDSK-TGRYYYYNASSSVTKWQKPTG 36
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 223 RCSHLLVKHSGSRRPSSWREEHITRTKEEALDILQEYRRKIIDREAKFEELASTYSDCS- 399
+C L +K + + + + ++R ++E L+ + ++ + +A EE+ + Y D +
Sbjct: 24 KCEELTLKFEQADKEKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALREEIQAKYDDVTQ 83
Query: 400 SAKR-DGDLGRFKK 438
A+R G+L KK
Sbjct: 84 KAERIQGELEESKK 97
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 223 RCSHLLVKHSGSRRPSSWREEHITRTKEEALDILQEYRRKIIDREAKFEELASTYSDCS- 399
+C L +K + + + + ++R ++E L+ + ++ + +A EE+ + Y D +
Sbjct: 24 KCEELTLKFEQADKEKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALREEIQAKYDDVTQ 83
Query: 400 SAKR-DGDLGRFKK 438
A+R G+L KK
Sbjct: 84 KAERIQGELEESKK 97
>U41105-15|AAT81191.1| 298|Caenorhabditis elegans Hypothetical
protein T02G5.13b protein.
Length = 298
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 334 RRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKGQMQK 453
R I+D+E+ E +S Y + GDL R ++ QM+K
Sbjct: 207 RSSIMDKESVSEVCSSLYEFWDTIGESGDLERRRQDQMKK 246
>U41105-14|AAA82408.2| 399|Caenorhabditis elegans Hypothetical
protein T02G5.13a protein.
Length = 399
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 334 RRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKGQMQK 453
R I+D+E+ E +S Y + GDL R ++ QM+K
Sbjct: 308 RSSIMDKESVSEVCSSLYEFWDTIGESGDLERRRQDQMKK 347
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,676,551
Number of Sequences: 27780
Number of extensions: 330352
Number of successful extensions: 901
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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