Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1091
         (700 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    73   9e-12
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    44   0.004
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    40   0.059
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    36   1.3  
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    34   2.9  
UniRef50_Q7N0G3 Cluster: Similarities with ribonuclease; n=1; Ph...    33   5.1  
UniRef50_A1VP16 Cluster: Peptidase C14, caspase catalytic subuni...    33   8.9  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 72.5 bits (170), Expect = 9e-12
 Identities = 40/72 (55%), Positives = 44/72 (61%)
 Frame = +2

Query: 425 GAPTARRTNATTSFLTATILVYXXXXXXXXXXXXRLALQLFLVKIFKVYSFRLRGLVRVP 604
           G P AR  + TTSFLTA  L+Y            RLALQ  LVK FKV SF+L+GL RV 
Sbjct: 30  GGPPARSQDPTTSFLTAATLIYAIGAGITAAAGTRLALQWILVKGFKVDSFQLQGLERVL 89

Query: 605 YRYFSSLPXRAG 640
           Y YFSSLP R G
Sbjct: 90  YCYFSSLPPRVG 101


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +2

Query: 83  GKCFR*CSSCDDPRISPLTSQYECPQ 160
           GKCFR C S ++ RISPLTS+Y+CPQ
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQ 284


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
          Predicted protein - Nematostella vectensis
          Length = 79

 Score = 39.9 bits (89), Expect = 0.059
 Identities = 18/23 (78%), Positives = 18/23 (78%)
 Frame = -3

Query: 74 FHQSRTKVRGSKAIRYRPSSNRK 6
          F   RTKVRGSK IRYRPSSN K
Sbjct: 6  FRCQRTKVRGSKTIRYRPSSNHK 28


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
          lucimarinus CCE9901|Rep: Predicted protein -
          Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 16/23 (69%), Positives = 16/23 (69%)
 Frame = -3

Query: 74 FHQSRTKVRGSKAIRYRPSSNRK 6
          FH  RTKV GSK IRY PS N K
Sbjct: 6  FHCQRTKVGGSKMIRYHPSLNHK 28


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +1

Query: 499 SWNYRGCWHQTCP 537
           SWNYR CWHQT P
Sbjct: 7   SWNYRSCWHQTGP 19


>UniRef50_Q7N0G3 Cluster: Similarities with ribonuclease; n=1;
           Photorhabdus luminescens subsp. laumondii|Rep:
           Similarities with ribonuclease - Photorhabdus
           luminescens subsp. laumondii
          Length = 272

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = +1

Query: 379 SPTICSANVSVSPRMRCTDSAAH-KCNYELFNRNNFSIRYWSWNYRGCWHQTC 534
           SP  C        R++ ++  A  +  YE F    FS   +SW   G W QTC
Sbjct: 92  SPAFCKGKAKNIERLKKSNKLAEAQREYEKFELQCFSENKFSWVIHGLWAQTC 144


>UniRef50_A1VP16 Cluster: Peptidase C14, caspase catalytic subunit
           p20; n=1; Polaromonas naphthalenivorans CJ2|Rep:
           Peptidase C14, caspase catalytic subunit p20 -
           Polaromonas naphthalenivorans (strain CJ2)
          Length = 562

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +1

Query: 403 VSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWS 501
           V+  PR+R  D AA + NY L NR+N+ +  W+
Sbjct: 163 VNAPPRVRAADPAAVQANY-LANRSNYEVSQWT 194


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,645,953
Number of Sequences: 1657284
Number of extensions: 12577555
Number of successful extensions: 27307
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27302
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)