Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1088
(700 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0351 - 17829874-17830005,17830250-17830267,17830544-178306... 165 3e-41
10_08_0021 + 14217455-14217505,14217742-14217909,14219137-142193... 81 6e-16
04_03_0438 + 15929220-15929453,15929564-15929764,15930874-159310... 75 7e-14
01_05_0718 - 24575946-24576121,24576721-24576874,24576964-245770... 74 1e-13
03_05_0299 + 22887603-22887797,22887891-22887986,22888089-228881... 69 4e-12
04_03_0447 + 16015043-16015489,16017358-16017530,16017906-160180... 62 4e-10
04_03_0436 + 15918144-15918377,15918514-15918717,15918813-15918911 60 2e-09
04_03_0439 + 15937934-15938167,15938276-15938476,15938852-159389... 58 9e-09
04_01_0350 - 4610444-4610668,4612181-4612969 42 4e-04
01_06_1338 + 36411536-36411646,36411738-36411791,36411898-364119... 41 8e-04
04_03_0435 + 15902356-15902574,15902680-15902777,15905100-159051... 39 0.004
10_01_0066 + 848523-849269,849520-849741 38 0.008
05_05_0196 + 23152389-23152658,23153042-23153092,23153167-231532... 38 0.010
10_01_0065 + 845447-846187,846969-847193 35 0.054
09_03_0022 + 11610691-11610760,11611153-11611564,11613581-11614109 31 0.67
07_01_0316 + 2226010-2226256,2226956-2227047,2227143-2227180,222... 31 0.67
06_02_0101 - 11816507-11816878,11817571-11817840,11818014-118180... 31 0.67
03_01_0100 - 791425-792996 31 0.67
09_02_0587 - 10948888-10949124,10949281-10949393,10949830-109502... 31 1.2
05_05_0085 - 22265143-22265226,22265294-22265602,22266915-222671... 29 3.5
06_02_0099 - 11730617-11730988,11731423-11731692,11732509-11732904 29 4.7
09_03_0005 + 11411828-11411894,11412122-11412677,11413424-11413433 28 6.2
01_07_0314 - 42688284-42688517,42688587-42688655,42688881-426890... 28 6.2
01_06_0238 - 27774546-27775418 28 6.2
01_02_0042 - 10513799-10514152,10514252-10514545,10514630-105148... 28 6.2
02_05_0739 + 31401372-31402371,31402667-31402719 28 8.2
>12_02_0351 -
17829874-17830005,17830250-17830267,17830544-17830672,
17831037-17831336,17831447-17831675,17831762-17831989,
17832380-17832645
Length = 433
Score = 165 bits (401), Expect = 3e-41
Identities = 86/229 (37%), Positives = 132/229 (57%), Gaps = 2/229 (0%)
Frame = +2
Query: 20 NMRYNELGTTGIKVSHISVGSAAFSNIYGKYDEKRSLELIKESLNLGINYLETGPWYGQG 199
+M ELG TG++VS + G++ +++G + ++ +L+LGIN+ +T P+YG
Sbjct: 111 DMELRELGATGLRVSPVGFGASPLGHVFGDVPRDVARAAVRRALDLGINFFDTSPYYGGT 170
Query: 200 SSEKVIGKAL--VGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDYV 373
SE V+G L GVPRD + + +K GRY + FDFSA + +D +L+ LGLDYV
Sbjct: 171 VSESVLGDCLRAAGVPRDRFVVATKCGRYREG----FDFSAARVTRSVDESLARLGLDYV 226
Query: 374 DLIQVHDITFAPDTSVVLKETLPVLEQAVRDGKARFIGIADYDIDLMKEVVEESGSQDIN 553
D++ HDI F D ++ ET+PVL++ GKARFIGI + + V+++ ++
Sbjct: 227 DILHCHDIEFT-DLDQIVNETIPVLQKIKESGKARFIGITGLPLSIYTYVLDQVPPGSVD 285
Query: 554 HTLLFRSPRSSIIAYRTILASSXSKGVGVINAAATGMGLLTNKGPQPWH 700
L + + A +L SKGVGVI+A+ MGLLT+ GP WH
Sbjct: 286 VILSYCHYGINDTALVDLLPYLKSKGVGVISASPLAMGLLTDNGPPEWH 334
>10_08_0021 +
14217455-14217505,14217742-14217909,14219137-14219340,
14219429-14219601,14219970-14220066,14220183-14220336,
14222029-14222209,14222858-14222898,14223146-14223231,
14223282-14223389,14223538-14223579
Length = 434
Score = 81.4 bits (192), Expect = 6e-16
Identities = 45/163 (27%), Positives = 87/163 (53%), Gaps = 2/163 (1%)
Frame = +2
Query: 35 ELGTTGIKVSHISVGSAAFSNIYGK-YDEKRSLELIKESLNLGINYLETGPWYGQGSSEK 211
+LGT G++VS + G + +Y E+ + +++ + G+ + +T YG ++E
Sbjct: 10 KLGTQGLEVSKLGFGCMGLTGVYNAPVAEEDGVAVVRRAFEAGVTFFDTSDAYGPHTNEV 69
Query: 212 VIGKALVGVPRDSYYIGSKVGRYDKDTLKMF-DFSAEKTAAGLDNTLSLLGLDYVDLIQV 388
++GKAL +PR+ + +K G D M + + A + +L L +DY+DL
Sbjct: 70 LLGKALKQLPREKVQVATKFGIAGFDANGMLVKGTPDYVRACCEASLERLAVDYIDLYYQ 129
Query: 389 HDITFAPDTSVVLKETLPVLEQAVRDGKARFIGIADYDIDLMK 517
H I D SV ++ET+ L++ V +GK +F+G+++ D ++
Sbjct: 130 HRI----DQSVPIEETMGELKKLVEEGKVKFVGLSEASADTIR 168
>04_03_0438 +
15929220-15929453,15929564-15929764,15930874-15931046,
15931131-15931233,15931763-15932107
Length = 351
Score = 74.5 bits (175), Expect = 7e-14
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Frame = +2
Query: 2 ASPQSFNMRYNELGTTGIKVSHISVGSAAFSNIYGK-YDEKRSLELIKESLNLGINYLET 178
A+P + +R +LG+ G++VS +G S YG E + LI ++ G+ L+T
Sbjct: 4 AAPATAAVRRMKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMVALIHHAVAAGVTLLDT 63
Query: 179 GPWYGQGSSEKVIGKALVGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLL 358
YG ++E ++GKAL G RD + +K G +D + A + +L L
Sbjct: 64 SDIYGPHTNELLLGKALQGGVRDKVELATKFGIAFEDGKRDVRGDPAYVRAACEGSLRRL 123
Query: 359 GLDYVDLIQVHDITFAPDTSVVLKETLPVLEQAVRDGKARFIGIAD 496
G+D +DL H + D V ++ T+ L++ V +GK ++IG+++
Sbjct: 124 GVDSIDLYYQHRV----DKKVPIEVTIGELKKLVEEGKIKYIGLSE 165
>01_05_0718 -
24575946-24576121,24576721-24576874,24576964-24577060,
24577142-24577314,24577426-24577629,24577725-24577892,
24577938-24578084
Length = 372
Score = 74.1 bits (174), Expect = 1e-13
Identities = 42/157 (26%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
Frame = +2
Query: 53 IKVSHISVGSAAFSNIYGK-YDEKRSLELIKESLNLGINYLETGPWYGQGSSEKVIGKAL 229
+ VS + G + Y D+ +I + G+ + +T YG ++E ++GKAL
Sbjct: 48 VTVSKLGFGCMGLTGAYNSPLDDDAGAAVIAHAFRRGVTFFDTSDVYGPLANEILLGKAL 107
Query: 230 VGVPRDSYYIGSKVG-RYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDYVDLIQVHDITFA 406
+PR+ + +K G R D ++ E A + +L LG+DY+DL H +
Sbjct: 108 KQLPREQVQVATKFGIRRGADGVRAVCGRPEYVRACCEASLGRLGVDYIDLYYQHRV--- 164
Query: 407 PDTSVVLKETLPVLEQAVRDGKARFIGIADYDIDLMK 517
DT++ +++T+ L++ V +GK R+IG+++ D ++
Sbjct: 165 -DTTIPIEDTIGELKKLVEEGKVRYIGLSEASPDTIR 200
>03_05_0299 +
22887603-22887797,22887891-22887986,22888089-22888172,
22888573-22888733,22889458-22889575,22889914-22890049,
22890351-22890529,22890690-22890929
Length = 402
Score = 68.9 bits (161), Expect = 4e-12
Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 26/223 (11%)
Frame = +2
Query: 2 ASPQSFNMRYNELGTTGIKVSHISVGSAAFSNIYGKYDEKRSLELIKESLNLGINYLETG 181
A QS M+Y +LG + + +S +++G+ F + EK + +++ S + G+N L+T
Sbjct: 40 AQAQS-QMQYRKLGDSDLVISEVTLGTMTFGE---QNTEKEAHDILSYSFDQGVNILDTA 95
Query: 182 PWYG-------QGSSEKVIGKALVGVPRDSYYIGSKVGRYD------KDTLKMFDFSAEK 322
Y QG ++ IG + PRD + +KV Y +D K+ A
Sbjct: 96 EMYPVPPRKETQGRTDLYIGSWMQSKPRDKIILATKVSGYSERSTFLRDNAKVVRVDAAN 155
Query: 323 TAAGLDNTLSLLGLDYVDLIQVH----------DITFAPD---TSVVLKETLPVLEQAVR 463
++ +LS L DY+DL+Q+H + + P SV +E L ++ +
Sbjct: 156 IKESVEKSLSRLSTDYIDLLQIHWPDRYVPLFGEYCYNPTKWRPSVPFEEQLKAFQELID 215
Query: 464 DGKARFIGIADYDIDLMKEVVEESGSQDINHTLLFRSPRSSII 592
+GK R+IG+++ + E V + Q + + ++ S I+
Sbjct: 216 EGKVRYIGVSNETSYGVMEFVHAAKVQGLPKIVSIQNSYSLIV 258
>04_03_0447 +
16015043-16015489,16017358-16017530,16017906-16018008,
16018177-16018521
Length = 355
Score = 62.1 bits (144), Expect = 4e-10
Identities = 50/229 (21%), Positives = 106/229 (46%), Gaps = 4/229 (1%)
Frame = +2
Query: 5 SPQSFNMRYNELGTTGIKVSHISVGSAAFSNIYG-KYDEKRSLELIKESLNLGINYLETG 181
+P + +R +LG+ G++VS +G S +YG + E + L++ ++ G+ +L+T
Sbjct: 8 APAAAVVRRMKLGSQGMEVSAQGLGCMGMSAVYGERKPEADMVALVRHAVAAGVTFLDTS 67
Query: 182 PWYGQGSSEKVIGKALVGVPRDSYYIGSKVG-RYDKDTLKMFDFSAEKTAAGLDNTLSLL 358
YG ++E ++GKA+ + +V ++ A + +L L
Sbjct: 68 DVYGPHTNEVLVGKAVAAAAATEEEVQVQVATKFGITPAWEVRGDPAYVRAACEGSLRRL 127
Query: 359 GLDYVDLIQVHDITFAPDTSVVLKETLPVLEQAVRDGKARFIGIADYDIDLMK--EVVEE 532
G+ +DL H I D++V ++ T+ L++ V +GK ++IG+++ ++ VV
Sbjct: 128 GVGCIDLYYQHRI----DSTVPVEITMGELKKLVEEGKIKYIGLSEASASTIRRAHVVHP 183
Query: 533 SGSQDINHTLLFRSPRSSIIAYRTILASSXSKGVGVINAAATGMGLLTN 679
+ I +L R I+ + G+G++ + G G ++
Sbjct: 184 ITAVQIEWSLWSRDVEEDIV------PTCRELGIGIVAYSPLGRGFFSS 226
>04_03_0436 + 15918144-15918377,15918514-15918717,15918813-15918911
Length = 178
Score = 59.7 bits (138), Expect = 2e-09
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
Frame = +2
Query: 2 ASPQSFNMRYNELGTTGIKVSHISVGSAAFSNIYG-KYDEKRSLELIKESLNLGINYLET 178
A+P + +R +LG+ G++VS +G S +G E + LI ++ G+ L+T
Sbjct: 4 AAPATAAVRRVKLGSQGLEVSAQGLGCMGMSAFHGPSKPEADMVALIHHAVAAGVTLLDT 63
Query: 179 GPWYGQGSSEKVIGKAL-VGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSL 355
YG ++E ++GKAL VG RD+ + +K G++ D A + +L
Sbjct: 64 ADIYGPHANEALLGKALQVGSVRDNVALATKFGKFLADGKVGIRGDPAYVRAACEGSLQR 123
Query: 356 LGLDYVDLIQVHDI 397
LG+D +DL H +
Sbjct: 124 LGVDCIDLYYQHRV 137
>04_03_0439 +
15937934-15938167,15938276-15938476,15938852-15938911,
15939896-15939958,15940822-15940848,15941020-15941358
Length = 307
Score = 57.6 bits (133), Expect = 9e-09
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Frame = +2
Query: 2 ASPQSFNMRYNELGTTGIKVSHISVGSAAFSNIYGK-YDEKRSLELIKESLNLGINYLET 178
A+P + +R +LG+ G++VS +G S YG E + LI ++ G+ +L+T
Sbjct: 4 AAPATAAVRRMKLGSQGLEVSAQGLGCMGMSAFYGPPKPEADMVALIHHAVAAGVTHLDT 63
Query: 179 GPWYGQGSSEKVIGKALVGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLL 358
YG ++E ++GKAL G R+ + +K D A + +L L
Sbjct: 64 SDMYGPHTNELLLGKALQGGVREKVEVATKFAVSFADGKVEIRGDPAYVRAACEGSLRRL 123
Query: 359 GLDYVDLIQVHDI 397
G+D VDL H +
Sbjct: 124 GVDCVDLYYQHRV 136
>04_01_0350 - 4610444-4610668,4612181-4612969
Length = 337
Score = 42.3 bits (95), Expect = 4e-04
Identities = 28/85 (32%), Positives = 41/85 (48%)
Frame = +2
Query: 137 IKESLNLGINYLETGPWYGQGSSEKVIGKALVGVPRDSYYIGSKVGRYDKDTLKMFDFSA 316
I ++ LG +L+T YG +E +G A+ R + S+ + L M D
Sbjct: 51 IAHAVRLGYRHLDTAAVYG---TEGAVGAAVAEAVRCGA-VASRGELFVTTKLSMADAHP 106
Query: 317 EKTAAGLDNTLSLLGLDYVDLIQVH 391
+ A L +LS LGLDYVDL +H
Sbjct: 107 PRVVAALRESLSRLGLDYVDLFLIH 131
>01_06_1338 +
36411536-36411646,36411738-36411791,36411898-36411974,
36412108-36412195,36412289-36412561,36412651-36412968
Length = 306
Score = 41.1 bits (92), Expect = 8e-04
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Frame = +2
Query: 131 ELIKESLNLGINYLETGPWYGQGSSEKVIGKALVGVPRDSYYIGSKVGRYDKDTLKMFDF 310
+++ ++ G +++ P Y + ++VIG AL + D + + + + D
Sbjct: 30 DVVSAAVKAGYRHIDCAPLYK--NEQEVIGGALKKLFDDG--VVKREDLFITSKIWCSDL 85
Query: 311 SAEKTAAGLDNTLSLLGLDYVDLIQVH-------DITFAPDTSVV--LKETLPVLEQAVR 463
+ E +D+TL L LDYVDL +H +P+ V + T +EQ
Sbjct: 86 APEDVPLAMDSTLKDLQLDYVDLYLIHWPFQIKKGTELSPENFVKPDIPSTWRAMEQLYD 145
Query: 464 DGKARFIGIADY 499
GKAR IG++++
Sbjct: 146 SGKARAIGVSNF 157
>04_03_0435 +
15902356-15902574,15902680-15902777,15905100-15905163,
15906707-15907045
Length = 239
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +2
Query: 35 ELGTTGIKVSHISVGSAAFSNIYGK-YDEKRSLELIKESLNLGINYLETGPWYGQGSSEK 211
+LG+ G++VS +G + E + LI+ ++ G+ + +T YG ++E
Sbjct: 10 KLGSQGMEVSAQGLGCMGMCPAFEPPKPEADMVALIRHAIAAGVTFFDTSDLYGPHTNEV 69
Query: 212 VIGKALV-GVPRDSYYIGSKVGRY 280
++GKAL G RD + +K G++
Sbjct: 70 LLGKALQGGGVRDRVELATKFGKF 93
>10_01_0066 + 848523-849269,849520-849741
Length = 322
Score = 37.9 bits (84), Expect = 0.008
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Frame = +2
Query: 68 ISVGSAAFSNIYGKYDEKRSLELIKESLNLGINYLETGPWYGQGSSEKVIGKALVGVPRD 247
I +G+AAF E+ + L++ ++ LG + +T Y ++E + +A+ R
Sbjct: 21 IGMGTAAFPFTSS---EETTAALLR-AIELGYRHFDTARLY---ATEGCVSEAVAEAVRR 73
Query: 248 SYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDYVDLIQVH-DITFAP---DT 415
+ S+ + L D A + TL LG+DYVDL+ VH T AP D
Sbjct: 74 GL-VASRADVFVTSKLWCSDLHAGRVVPAARETLRNLGMDYVDLLLVHWPATVAPGSYDF 132
Query: 416 SVVLKETLPV---------LEQAVRDGKARFIGIADYDIDLMKEVV 526
+E P +E+ R G AR IG++++ +++++
Sbjct: 133 PFPKEEMAPAFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLL 178
>05_05_0196 +
23152389-23152658,23153042-23153092,23153167-23153240,
23153356-23153443,23153541-23153738,23153824-23153895,
23154034-23154093,23154194-23154370,23154975-23155064
Length = 359
Score = 37.5 bits (83), Expect = 0.010
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 16/150 (10%)
Frame = +2
Query: 134 LIKESLNLGINYLETGPWYGQGSSEKVIGKAL-----VGVPRDSYYIGSKVGRYDKDTLK 298
LI L G +++T YG E+ +GK L G+ R ++ SK+
Sbjct: 84 LIVNHLQAGYRHVDTAAQYG---IEQEVGKGLKAAMEAGINRKDLFVTSKIW-------- 132
Query: 299 MFDFSAEKTAAGLDNTLSLLGLDYVDLIQVH-------DITFAPDTSVVLKETLPV---- 445
+ + E+ L NTL L LDY+DL +H P+ VL+ +
Sbjct: 133 CTNLAPERVRPALKNTLKDLQLDYIDLYLIHWPFRLKDGAHQPPEAGEVLEFDMEAVWRE 192
Query: 446 LEQAVRDGKARFIGIADYDIDLMKEVVEES 535
+E+ V DG + IG+ ++ + + +++ +
Sbjct: 193 MERLVTDGLVKDIGVCNFSVTKLNRLLQSA 222
>10_01_0065 + 845447-846187,846969-847193
Length = 321
Score = 35.1 bits (77), Expect = 0.054
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Frame = +2
Query: 68 ISVGSAAFSNIYGKYDEKRSLELIKESLNLGINYLETGPWYGQGSSEKVIGKALVGVPRD 247
+ +G+AAF + ++ + L ++ LG + +T Y ++E +G+A+ R
Sbjct: 19 VGMGTAAFP--FTSSEDTTAAML--RAIELGYRHFDTARIY---ATEGCVGEAVAEAVRR 71
Query: 248 SYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDYVDLIQVH-DITFAP---DT 415
I S+ + + D A + TL LG+DYVDL+ VH ++ P D
Sbjct: 72 GL-IASRADVFVTSKIWCSDLHAGRVVPAARETLRNLGMDYVDLLLVHWPVSLTPGNYDF 130
Query: 416 SVVLKETLPV---------LEQAVRDGKARFIGIADYDIDLMKEVV 526
+ LP +E+ R G AR IG++++ +++++
Sbjct: 131 PFPKEVILPSFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLL 176
>09_03_0022 + 11610691-11610760,11611153-11611564,11613581-11614109
Length = 336
Score = 31.5 bits (68), Expect = 0.67
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 98 IYGKYDEKRSLELIKESLNLGINYLET 178
+YG YD K S ++ L+LG+NY +T
Sbjct: 73 VYGNYDGKNSSSTLQFDLHLGVNYWKT 99
>07_01_0316 +
2226010-2226256,2226956-2227047,2227143-2227180,
2227289-2227450,2227540-2227562,2227673-2227744,
2227858-2228025,2228318-2228400,2228533-2228595,
2228735-2228917
Length = 376
Score = 31.5 bits (68), Expect = 0.67
Identities = 45/231 (19%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Frame = +2
Query: 38 LGTTGIKVSHISVGSAAFSNIY----GKYDEKRSLEL---IKESLNLGINYLETGPWYGQ 196
LG + + VS + +G+ ++ + ++D++R E S++ G+ +T YG
Sbjct: 53 LGGSEVAVSKLGIGAWSWGDTTYWNDSEWDDRRLQEAKAAFDTSIDNGMTLFDTAEVYGT 112
Query: 197 GSSEKVIGKALVG--VPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDY 370
V ++L+G + V K + F + L +L LGL
Sbjct: 113 ALMGAVNSESLLGGFIKERQEKEQIDVAVATKFAALPWRFGRGSVLSALKKSLDRLGLSS 172
Query: 371 VDLIQVHDITFAPDTSVVLKETLPVLEQAVRDGKARFIGIADYDIDLMKEV---VEESG- 538
V+L Q+H + L L A G + +G+++Y+ +++ +++ G
Sbjct: 173 VELYQLHWPGLWGNEGY-----LDGLADAYEQGLVKAVGVSNYNEKRLRDAYARMKKRGV 227
Query: 539 ---SQDINHTLLFRSPRSSIIAYRTILASSXSKGVGVINAAATGMGLLTNK 682
+ +N++L++R+P + A+ G+ +I + G+L+ K
Sbjct: 228 PLAANQVNYSLIYRTPE-----LNGVKAACDELGITLIAYSPIAQGVLSGK 273
>06_02_0101 -
11816507-11816878,11817571-11817840,11818014-11818076,
11818610-11819002
Length = 365
Score = 31.5 bits (68), Expect = 0.67
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Frame = +2
Query: 218 GKALVGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDYVDLIQVHDI 397
G +G S+ + ++ +D +E+ +G L+ LG +++ D+
Sbjct: 166 GNICIGKATPSHVVKLFQKKFKEDFSLFLALRSEELVSGGCMVLTFLGRKSSEMLAHGDV 225
Query: 398 TFAPDTS-VVLKETLPVLEQA--VRDGKARFIGIADY--DIDLMKEVVEESGSQDINHTL 562
DT +L E L +L Q V++ + Y +D + E++EESG D+ HT
Sbjct: 226 ----DTMWELLAEALQILVQKGRVKEEDLTTFNLPFYAPSVDEVTELIEESGLFDVEHTG 281
Query: 563 LFRS 574
+F S
Sbjct: 282 VFES 285
>03_01_0100 - 791425-792996
Length = 523
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 473 ARFIGIADYDIDLMKEVVEESGSQDINHTLLFRSPRSSII 592
ARF+G YD+DL + +GS D+ LL +PRS I+
Sbjct: 252 ARFLGYDIYDVDLSR-----AGSDDLRALLLHTTPRSLIL 286
>09_02_0587 -
10948888-10949124,10949281-10949393,10949830-10950293,
10951223-10951766,10951902-10951971
Length = 475
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +2
Query: 101 YGKYDEKRSLELIKESLNLGINYLET--GPW 187
YG YD K S I+ L LG+NY T PW
Sbjct: 108 YGNYDGKNSSSTIQFDLYLGVNYWATVKDPW 138
>05_05_0085 -
22265143-22265226,22265294-22265602,22266915-22267187,
22267413-22267500,22267620-22267696,22267791-22267841,
22267967-22268077
Length = 330
Score = 29.1 bits (62), Expect = 3.5
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Frame = +2
Query: 203 SEKVIGKALVGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDYVDLI 382
+EK IG AL V + I + + L + + E LD+TL L DYVDL
Sbjct: 51 NEKEIGVALKKVFDEG--IVKREDIFITSKLWCTNHAPEDVPVALDSTLQDLQTDYVDLY 108
Query: 383 QVH-DITFAPDTSVVLKETLP--------VLEQAVRDGKARFIGIADYDIDLMKEVV 526
+H + + LP +E+ GKAR IG++++ +++++
Sbjct: 109 LIHWPVRMKKGAGFGGQNVLPTDIPATWAAMEKLHDSGKARAIGVSNFSSKKLEDLL 165
>06_02_0099 - 11730617-11730988,11731423-11731692,11732509-11732904
Length = 345
Score = 28.7 bits (61), Expect = 4.7
Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 4/123 (3%)
Frame = +2
Query: 218 GKALVGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDYVDLIQVHDI 397
G +G S+ + ++ +D E+ +G L+ LG ++ D+
Sbjct: 146 GNIYIGKATPSHVVKLFQKKFKEDFSLFLTLRQEELVSGGRMVLTFLGRKSSQMLAHGDV 205
Query: 398 TFAPDTSVVLKETLPVLEQA--VRDGKARFIGIADY--DIDLMKEVVEESGSQDINHTLL 565
+ +L + L +L Q V++ + Y +D + E++EESG D+ HT +
Sbjct: 206 GTMWE---LLAQALQILVQKGRVKEEDLTTFNLPFYAPSVDEVTELIEESGLFDVEHTGV 262
Query: 566 FRS 574
F S
Sbjct: 263 FES 265
>09_03_0005 + 11411828-11411894,11412122-11412677,11413424-11413433
Length = 210
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 101 YGKYDEKRSLELIKESLNLGINYLET 178
YG YD K S ++ L+LG NY +T
Sbjct: 107 YGNYDGKNSSSSLQFDLHLGSNYWDT 132
>01_07_0314 -
42688284-42688517,42688587-42688655,42688881-42689001,
42689196-42689371,42689473-42689574,42690376-42691320
Length = 548
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 428 KETLPVLEQAVRDGKARFIGIADYDIDLMKEVVEESG 538
+ET VLE R GKA G A++D +K+ + +G
Sbjct: 211 EETAEVLEGWFRSGKAAMAGKAEWDACKVKDAIVANG 247
>01_06_0238 - 27774546-27775418
Length = 290
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = -1
Query: 541 TSGLLYYFLHQVDIIVSDPNEASFSISHGLLQHWQRLFEYNRSVRSKS 398
+ G + ++H+ D+ +DP++ + S + R + + +VRSKS
Sbjct: 35 SGGNPWRYVHEADVYAADPDDLTGKYSPAVASDGSRAWYFFTTVRSKS 82
>01_02_0042 -
10513799-10514152,10514252-10514545,10514630-10514893,
10515019-10515285,10515363-10516207,10516311-10516584,
10516694-10517219,10518009-10518247,10518370-10518591,
10518689-10518864,10518962-10519358
Length = 1285
Score = 28.3 bits (60), Expect = 6.2
Identities = 39/141 (27%), Positives = 54/141 (38%), Gaps = 5/141 (3%)
Frame = +2
Query: 260 GSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDYVDLIQVHDITFAPDTSVVLKETL 439
G VGR DT+ + D EK + ++ LG V Q +T +V+ T+
Sbjct: 171 GEVVGRMSGDTVLIQDAMGEKVGKFIQLVVTFLGGFIVAFAQGWLLT------LVMMATI 224
Query: 440 P--VLEQAVRD---GKARFIGIADYDIDLMKEVVEESGSQDINHTLLFRSPRSSIIAYRT 604
P V+ AV K +G A Y VV E I F + ++ Y
Sbjct: 225 PPLVVAGAVMSNVVAKMASLGQAAY---AESSVVVEQTIGSIRTVASFTGEKQAVEKYNK 281
Query: 605 ILASSXSKGVGVINAAATGMG 667
L S+ GV AA GMG
Sbjct: 282 SLKSAYKSGVREGLAAGLGMG 302
>02_05_0739 + 31401372-31402371,31402667-31402719
Length = 350
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +2
Query: 104 GKYDEKRSLELIKESLNLGINYLETGPWYGQGSSEKVIGKALVGVPRDSYYIGSKVGRYD 283
GK E + + + LNL IN+ G G+ E+ GK + + + GS G++
Sbjct: 140 GKQFESGKFQDMCKGLNLQINFASVGHPQTNGAVERANGKIMEAIKK--RLEGSAKGKWP 197
Query: 284 KDTLKM 301
+D L +
Sbjct: 198 EDLLSV 203
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,245,056
Number of Sequences: 37544
Number of extensions: 361502
Number of successful extensions: 968
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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