Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1087
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical pr... 103 8e-23
Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical pr... 103 1e-22
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 81 7e-16
AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical ... 81 7e-16
AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical ... 81 7e-16
AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical ... 81 7e-16
AF039046-12|AAB94215.1| 299|Caenorhabditis elegans Hydroxy-acyl... 76 2e-14
Z81055-2|CAB02891.2| 437|Caenorhabditis elegans Hypothetical pr... 73 2e-13
Z81055-3|CAB02892.2| 434|Caenorhabditis elegans Hypothetical pr... 66 3e-11
>Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical
protein B0272.3 protein.
Length = 309
Score = 103 bits (248), Expect = 8e-23
Identities = 51/125 (40%), Positives = 72/125 (57%)
Frame = +2
Query: 167 VNDSLGRINTXXXXXXXXXXXXLXVEAIGENXGVXHXLFXQLDGVTPSHTIFASNTSSLS 346
V+ L RI L +EAI EN + LF +++ T+ +NTSSL
Sbjct: 88 VSSVLDRIKMSTNVSDSVKDADLVIEAIVENIDIKRKLFAEVEVAAKPTTLITTNTSSLR 147
Query: 347 INEIASVVKRXDKXGGLHFFNPVPXMRXLXVVKGXXTSXATYQTMMEWGKSVGKTCITCK 526
+ +I +K + GGLHFFNPVP M+ L VV+ TS AT+ ++++GK+VGKT + CK
Sbjct: 148 LADIGLNLKDKSRFGGLHFFNPVPMMKLLEVVRHTETSDATFNQLVDYGKTVGKTTVACK 207
Query: 527 DTPGF 541
DTPGF
Sbjct: 208 DTPGF 212
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +3
Query: 42 NVTLIDXTNDALAKAXXSIGTXLSRVAKK 128
NVT++D AL KA I L RVAKK
Sbjct: 47 NVTVVDSNQSALEKAQQGIANSLKRVAKK 75
>Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical
protein F54C8.1 protein.
Length = 298
Score = 103 bits (246), Expect = 1e-22
Identities = 49/131 (37%), Positives = 74/131 (56%)
Frame = +2
Query: 149 KEGEKFVNDSLGRINTXXXXXXXXXXXXLXVEAIGENXGVXHXLFXQLDGVTPSHTIFAS 328
KE FV ++ RI T L +EA EN + +F Q++ +I +
Sbjct: 70 KEKSDFVTLTMSRIKTCNNVSTAVADADLIIEAAIENIDLKRGIFAQIEQSCKKDSILTT 129
Query: 329 NTSSLSINEIASVVKRXDKXGGLHFFNPVPXMRXLXVVKGXXTSXATYQTMMEWGKSVGK 508
NTSS + ++A ++ + GGLHFFNPVP M+ L V++ TS TY T++++G +VGK
Sbjct: 130 NTSSFLLEDVAKGLQDKTRFGGLHFFNPVPVMKLLEVIRSDDTSDETYATLIKFGTAVGK 189
Query: 509 TCITCKDTPGF 541
T + CKD+PGF
Sbjct: 190 TTVACKDSPGF 200
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 81.0 bits (191), Expect = 7e-16
Identities = 39/101 (38%), Positives = 58/101 (57%)
Frame = +2
Query: 239 VEAIGENXGVXHXLFXQLDGVTPSHTIFASNTSSLSINEIASVVKRXDKXGGLHFFNPVP 418
+EA+ E+ + H + Q++ V +TI ASNTS+L I +IA+ R DK G+H+F+PV
Sbjct: 436 IEAVFEDLPLKHKVIRQIENVVGPNTIIASNTSALPIKDIAAASSRSDKVIGMHYFSPVE 495
Query: 419 XMRXLXVVKGXXTSXATYQTMMEWGKSVGKTCITCKDTPGF 541
M+ L ++ TS T T + G GK + KD PGF
Sbjct: 496 KMQLLEIITHDGTSKETLATAAQLGLKQGKLVVVVKDCPGF 536
>AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical
protein T08B2.7c protein.
Length = 697
Score = 81.0 bits (191), Expect = 7e-16
Identities = 39/101 (38%), Positives = 58/101 (57%)
Frame = +2
Query: 239 VEAIGENXGVXHXLFXQLDGVTPSHTIFASNTSSLSINEIASVVKRXDKXGGLHFFNPVP 418
+EA+ E+ + H + Q++ V +TI ASNTS+L I +IA+ R DK G+H+F+PV
Sbjct: 462 IEAVFEDLQLKHKVIKQIESVVGPNTIIASNTSALPIKDIAAASSRPDKVIGMHYFSPVE 521
Query: 419 XMRXLXVVKGXXTSXATYQTMMEWGKSVGKTCITCKDTPGF 541
M+ L ++ TS T T + G GK + KD PGF
Sbjct: 522 KMQLLEIITHDGTSKETLATAAQLGLKQGKLVVVVKDCPGF 562
>AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical
protein T08B2.7b protein.
Length = 755
Score = 81.0 bits (191), Expect = 7e-16
Identities = 39/101 (38%), Positives = 58/101 (57%)
Frame = +2
Query: 239 VEAIGENXGVXHXLFXQLDGVTPSHTIFASNTSSLSINEIASVVKRXDKXGGLHFFNPVP 418
+EA+ E+ + H + Q++ V +TI ASNTS+L I +IA+ R DK G+H+F+PV
Sbjct: 436 IEAVFEDLQLKHKVIKQIESVVGPNTIIASNTSALPIKDIAAASSRPDKVIGMHYFSPVE 495
Query: 419 XMRXLXVVKGXXTSXATYQTMMEWGKSVGKTCITCKDTPGF 541
M+ L ++ TS T T + G GK + KD PGF
Sbjct: 496 KMQLLEIITHDGTSKETLATAAQLGLKQGKLVVVVKDCPGF 536
>AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical
protein T08B2.7a protein.
Length = 781
Score = 81.0 bits (191), Expect = 7e-16
Identities = 39/101 (38%), Positives = 58/101 (57%)
Frame = +2
Query: 239 VEAIGENXGVXHXLFXQLDGVTPSHTIFASNTSSLSINEIASVVKRXDKXGGLHFFNPVP 418
+EA+ E+ + H + Q++ V +TI ASNTS+L I +IA+ R DK G+H+F+PV
Sbjct: 462 IEAVFEDLQLKHKVIKQIESVVGPNTIIASNTSALPIKDIAAASSRPDKVIGMHYFSPVE 521
Query: 419 XMRXLXVVKGXXTSXATYQTMMEWGKSVGKTCITCKDTPGF 541
M+ L ++ TS T T + G GK + KD PGF
Sbjct: 522 KMQLLEIITHDGTSKETLATAAQLGLKQGKLVVVVKDCPGF 562
>AF039046-12|AAB94215.1| 299|Caenorhabditis elegans
Hydroxy-acyl-coa dehydrogenaseprotein 1 protein.
Length = 299
Score = 76.2 bits (179), Expect = 2e-14
Identities = 35/103 (33%), Positives = 56/103 (54%)
Frame = +2
Query: 233 LXVEAIGENXGVXHXLFXQLDGVTPSHTIFASNTSSLSINEIASVVKRXDKXGGLHFFNP 412
+ +EA+ EN + +F + P + + +NTSSL ++++ V++ GLHFFNP
Sbjct: 101 MAIEAVAENLDLKLDIFQTIQKTCPQNCMLITNTSSLKLSQMLPVIQNPALFAGLHFFNP 160
Query: 413 VPXMRXLXVVKGXXTSXATYQTMMEWGKSVGKTCITCKDTPGF 541
VP M+ + VV TS T + + K + K + KDTPGF
Sbjct: 161 VPVMKLVEVVSTDETSPETTNFLFNFCKEIKKLPVAAKDTPGF 203
>Z81055-2|CAB02891.2| 437|Caenorhabditis elegans Hypothetical
protein F01G10.2 protein.
Length = 437
Score = 72.5 bits (170), Expect = 2e-13
Identities = 38/103 (36%), Positives = 57/103 (55%)
Frame = +2
Query: 233 LXVEAIGENXGVXHXLFXQLDGVTPSHTIFASNTSSLSINEIASVVKRXDKXGGLHFFNP 412
L VEA+ E+ + LF +LD + IF +NTSSL +NE++SV++ K G+HFFNP
Sbjct: 121 LIVEAVFEDMKLKKELFTKLDKICKPSCIFGTNTSSLDLNEMSSVLRDPTKVVGIHFFNP 180
Query: 413 VPXMRXLXVVKGXXTSXATYQTMMEWGKSVGKTCITCKDTPGF 541
+R + V+ G TS T E +S+ K + + P F
Sbjct: 181 ANLIRMVEVIYGSKTSSKAVATAFEACRSIKKLPVLVGNCPAF 223
>Z81055-3|CAB02892.2| 434|Caenorhabditis elegans Hypothetical
protein F01G10.3 protein.
Length = 434
Score = 65.7 bits (153), Expect = 3e-11
Identities = 33/92 (35%), Positives = 52/92 (56%)
Frame = +2
Query: 233 LXVEAIGENXGVXHXLFXQLDGVTPSHTIFASNTSSLSINEIASVVKRXDKXGGLHFFNP 412
L VE++ E+ + LF L+ + S IF +NTSSL +NEI+SV++ G+HFFNP
Sbjct: 118 LIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISSVLRDPSNLVGIHFFNP 177
Query: 413 VPXMRXLXVVKGXXTSXATYQTMMEWGKSVGK 508
+R + ++ G TS T + +S+ K
Sbjct: 178 ANVIRLVEIIYGSHTSSQAIATAFQACESIKK 209
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,735,874
Number of Sequences: 27780
Number of extensions: 140507
Number of successful extensions: 167
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 167
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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