Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1086
(400 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 32 0.61
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 32 0.81
BC032025-1|AAH32025.1| 141|Homo sapiens chromosome 3 open readi... 30 2.5
AL162426-8|CAI41183.1| 520|Homo sapiens chromosome 9 open readi... 30 3.3
AF308819-1|AAL55819.1| 450|Homo sapiens nuclear receptor-intera... 30 3.3
AF209198-1|AAF85941.1| 438|Homo sapiens zinc finger protein 277... 30 3.3
AC004112-1|AAS07407.1| 419|Homo sapiens unknown protein. 30 3.3
X72889-1|CAA51407.1| 1586|Homo sapiens HBRM protein. 29 4.3
D26155-1|BAA05142.1| 1572|Homo sapiens transcriptional activator... 29 4.3
BC040029-1|AAH40029.1| 298|Homo sapiens SMARCA2 protein protein. 29 4.3
AL359076-5|CAI12969.1| 559|Homo sapiens SWI/SNF related, matrix... 29 4.3
AL359076-4|CAI12968.1| 1572|Homo sapiens SWI/SNF related, matrix... 29 4.3
AL359076-3|CAI12967.1| 1590|Homo sapiens SWI/SNF related, matrix... 29 4.3
AL138755-9|CAI14600.1| 1572|Homo sapiens SWI/SNF related, matrix... 29 4.3
AL138755-8|CAI14599.1| 1590|Homo sapiens SWI/SNF related, matrix... 29 4.3
AF260261-1|AAF70308.1| 513|Homo sapiens Abl-interactor protein ... 29 4.3
BC033215-1|AAH33215.1| 250|Homo sapiens microtubule associated ... 28 9.9
AY439222-1|AAR13901.1| 238|Homo sapiens unknown protein. 28 9.9
AK128409-1|BAC87426.1| 160|Homo sapiens protein ( Homo sapiens ... 28 9.9
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 32.3 bits (70), Expect = 0.61
Identities = 22/70 (31%), Positives = 31/70 (44%)
Frame = -1
Query: 358 VLPAGPRTAPAHSGGGTPSRTLARTSSPGALISGALTSLTLPNLVGMNGRLAQSAFIHTV 179
V+ PRT + + T S + SGA TS T+P L G +A + T
Sbjct: 3424 VMATSPRTEASSAVLTTISPGAPEMVTSQITSSGAATSTTVPTLTHSPGMPETTALLSTH 3483
Query: 178 TKTIQAKTFP 149
+T +KTFP
Sbjct: 3484 PRTETSKTFP 3493
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 31.9 bits (69), Expect = 0.81
Identities = 22/70 (31%), Positives = 31/70 (44%)
Frame = -1
Query: 358 VLPAGPRTAPAHSGGGTPSRTLARTSSPGALISGALTSLTLPNLVGMNGRLAQSAFIHTV 179
V+ PRT + + T S + SGA TS T+P L G +A + T
Sbjct: 11720 VMATSPRTEASSAVLTTISPGAPEMVTSQITSSGAATSTTVPTLTHSPGMPETTALLSTH 11779
Query: 178 TKTIQAKTFP 149
+T +KTFP
Sbjct: 11780 PRTGTSKTFP 11789
>BC032025-1|AAH32025.1| 141|Homo sapiens chromosome 3 open reading
frame 22 protein.
Length = 141
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 219 IPTRLGSVKEVSAPDMRAPGELVRARVREGVPPPLC 326
+PTR V+ + APD +P A + PPPLC
Sbjct: 63 VPTRSIPVRGLGAPDFTSPSGSCPAPLPAPSPPPLC 98
>AL162426-8|CAI41183.1| 520|Homo sapiens chromosome 9 open reading
frame 117 protein.
Length = 520
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 198 DCASLPFIPTRLGSVKEVSAPDMRAPGELVR 290
D L +I TR+G+ + S+P+MRAPG L R
Sbjct: 477 DLRLLSYI-TRVGTFRAHSSPEMRAPGSLKR 506
>AF308819-1|AAL55819.1| 450|Homo sapiens nuclear
receptor-interacting factor protein.
Length = 450
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 132 ESKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVFRRTDVYGCR 1
E Y H A+E L++ + L+ YQ ++V F R V+ CR
Sbjct: 315 EKLYVHMEDAHEFDLLKIKSELGLNFYQQVKLVNFIRRQVHQCR 358
>AF209198-1|AAF85941.1| 438|Homo sapiens zinc finger protein 277
protein.
Length = 438
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 132 ESKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVFRRTDVYGCR 1
E Y H A+E L++ + L+ YQ ++V F R V+ CR
Sbjct: 303 EKLYVHMEDAHEFDLLKIKSELGLNFYQQVKLVNFIRRQVHQCR 346
>AC004112-1|AAS07407.1| 419|Homo sapiens unknown protein.
Length = 419
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 132 ESKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVFRRTDVYGCR 1
E Y H A+E L++ + L+ YQ ++V F R V+ CR
Sbjct: 284 EKLYVHMEDAHEFDLLKIKSELGLNFYQQVKLVNFIRRQVHQCR 327
>X72889-1|CAA51407.1| 1586|Homo sapiens HBRM protein.
Length = 1586
Score = 29.5 bits (63), Expect = 4.3
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = -1
Query: 391 SPFRXHQRRILVLPAGPRTAPAH-----SGGGTPSRTLARTSSPGALISGALTSLTLPN 230
SP H + + P AP H SGGG P+ S PGALI G +++ PN
Sbjct: 111 SPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGG-PTPPQMPPSQPGALIPGDPQAMSQPN 168
>D26155-1|BAA05142.1| 1572|Homo sapiens transcriptional activator
hSNF2a protein.
Length = 1572
Score = 29.5 bits (63), Expect = 4.3
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = -1
Query: 391 SPFRXHQRRILVLPAGPRTAPAH-----SGGGTPSRTLARTSSPGALISGALTSLTLPN 230
SP H + + P AP H SGGG P+ S PGALI G +++ PN
Sbjct: 111 SPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGG-PTPPQMPPSQPGALIPGDPQAMSQPN 168
>BC040029-1|AAH40029.1| 298|Homo sapiens SMARCA2 protein protein.
Length = 298
Score = 29.5 bits (63), Expect = 4.3
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = -1
Query: 391 SPFRXHQRRILVLPAGPRTAPAH-----SGGGTPSRTLARTSSPGALISGALTSLTLPN 230
SP H + + P AP H SGGG P+ S PGALI G +++ PN
Sbjct: 111 SPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGG-PTPPQMPPSQPGALIPGDPQAMSQPN 168
>AL359076-5|CAI12969.1| 559|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 559
Score = 29.5 bits (63), Expect = 4.3
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = -1
Query: 391 SPFRXHQRRILVLPAGPRTAPAH-----SGGGTPSRTLARTSSPGALISGALTSLTLPN 230
SP H + + P AP H SGGG P+ S PGALI G +++ PN
Sbjct: 111 SPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGG-PTPPQMPPSQPGALIPGDPQAMSQPN 168
>AL359076-4|CAI12968.1| 1572|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1572
Score = 29.5 bits (63), Expect = 4.3
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = -1
Query: 391 SPFRXHQRRILVLPAGPRTAPAH-----SGGGTPSRTLARTSSPGALISGALTSLTLPN 230
SP H + + P AP H SGGG P+ S PGALI G +++ PN
Sbjct: 111 SPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGG-PTPPQMPPSQPGALIPGDPQAMSQPN 168
>AL359076-3|CAI12967.1| 1590|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1590
Score = 29.5 bits (63), Expect = 4.3
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = -1
Query: 391 SPFRXHQRRILVLPAGPRTAPAH-----SGGGTPSRTLARTSSPGALISGALTSLTLPN 230
SP H + + P AP H SGGG P+ S PGALI G +++ PN
Sbjct: 111 SPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGG-PTPPQMPPSQPGALIPGDPQAMSQPN 168
>AL138755-9|CAI14600.1| 1572|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1572
Score = 29.5 bits (63), Expect = 4.3
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = -1
Query: 391 SPFRXHQRRILVLPAGPRTAPAH-----SGGGTPSRTLARTSSPGALISGALTSLTLPN 230
SP H + + P AP H SGGG P+ S PGALI G +++ PN
Sbjct: 111 SPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGG-PTPPQMPPSQPGALIPGDPQAMSQPN 168
>AL138755-8|CAI14599.1| 1590|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1590
Score = 29.5 bits (63), Expect = 4.3
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = -1
Query: 391 SPFRXHQRRILVLPAGPRTAPAH-----SGGGTPSRTLARTSSPGALISGALTSLTLPN 230
SP H + + P AP H SGGG P+ S PGALI G +++ PN
Sbjct: 111 SPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGG-PTPPQMPPSQPGALIPGDPQAMSQPN 168
>AF260261-1|AAF70308.1| 513|Homo sapiens Abl-interactor protein 2b
protein.
Length = 513
Score = 29.5 bits (63), Expect = 4.3
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -1
Query: 352 PAGPRTAPAHSGG-GTPSRTLARTSSPGALISGALTSLTLPN 230
P+ P PA +G GTP S+P L+ + S T PN
Sbjct: 276 PSPPSVFPAPAGSAGTPPLPATSASAPAPLVPATVPSSTAPN 317
>BC033215-1|AAH33215.1| 250|Homo sapiens microtubule associated
serine/threonine kinase family member 4 protein.
Length = 250
Score = 28.3 bits (60), Expect = 9.9
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +3
Query: 222 PTRLGSVKEVSAPDMRAPGELVRARVREGVPPPLCAGAVRGPAGRTS 362
P LG AP AP ++ R +PPPL GAV PA R S
Sbjct: 66 PPPLGGTLGARAPAAWAPASVLLERGVLALPPPLPGGAV-PPAPRGS 111
>AY439222-1|AAR13901.1| 238|Homo sapiens unknown protein.
Length = 238
Score = 28.3 bits (60), Expect = 9.9
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +3
Query: 222 PTRLGSVKEVSAPDMRAPGELVRARVREGVPPPLCAGAVRGPAGRTS 362
P LG AP AP ++ R +PPPL GAV PA R S
Sbjct: 66 PPPLGGTLGARAPAAWAPASVLLERGVLALPPPLPGGAV-PPAPRGS 111
>AK128409-1|BAC87426.1| 160|Homo sapiens protein ( Homo sapiens
cDNA FLJ46552 fis, clone THYMU3038759. ).
Length = 160
Score = 28.3 bits (60), Expect = 9.9
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = +3
Query: 216 FIPTRLGSVKEVS----APDMRAPGELVRARVREGVPPPLCAG 332
F P+RLG +S AP + PG +R R G P C+G
Sbjct: 14 FFPSRLGPGTCLSGCSVAPSLLRPGRKLRIRAASGPSPRWCSG 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,525,475
Number of Sequences: 237096
Number of extensions: 1344550
Number of successful extensions: 3835
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3829
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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