Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1086
(400 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068708-11|AAC17757.1| 136|Caenorhabditis elegans Hypothetical... 31 0.40
U80445-7|AAB37798.1| 368|Caenorhabditis elegans Hypothetical pr... 29 1.2
U80437-6|AAB37621.1| 368|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 28 2.8
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 28 2.8
Z92849-6|CAB07429.2| 306|Caenorhabditis elegans Hypothetical pr... 27 5.0
U97005-4|AAB52283.1| 314|Caenorhabditis elegans Hypothetical pr... 27 5.0
AF016674-7|AAB66126.2| 415|Caenorhabditis elegans C-type lectin... 27 5.0
Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical pr... 26 8.7
L15347-1|AAA28142.1| 813|Caenorhabditis elegans raf proto-oncog... 26 8.7
AY493414-1|AAR86713.1| 769|Caenorhabditis elegans LIN-45 isofor... 26 8.7
AY493413-1|AAR86712.1| 813|Caenorhabditis elegans LIN-45 isofor... 26 8.7
AY455928-1|AAR26307.1| 813|Caenorhabditis elegans LIN-45 protein. 26 8.7
AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein. 26 8.7
AC024204-7|AAM97982.1| 614|Caenorhabditis elegans Abnormal cell... 26 8.7
AC024204-6|AAF36042.1| 813|Caenorhabditis elegans Abnormal cell... 26 8.7
>AF068708-11|AAC17757.1| 136|Caenorhabditis elegans Hypothetical
protein C18G1.1 protein.
Length = 136
Score = 30.7 bits (66), Expect = 0.40
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -2
Query: 192 LSIQSLKLYKQKPFRLTFPTESKYRHHRTAYEIVL 88
+S+ LK Y +KP R TE++ +H+RT + I+L
Sbjct: 45 ISLFPLKDYSRKPGRGPQRTEAEMKHYRTVFYIIL 79
>U80445-7|AAB37798.1| 368|Caenorhabditis elegans Hypothetical
protein C50F2.5 protein.
Length = 368
Score = 29.1 bits (62), Expect = 1.2
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -2
Query: 129 SKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVF 28
+KY T E+V+ +N++ SNY++ R++VF
Sbjct: 189 TKYELELTDSEVVIDKNSDDPNASNYKSHRLIVF 222
>U80437-6|AAB37621.1| 368|Caenorhabditis elegans Hypothetical
protein C43E11.5 protein.
Length = 368
Score = 29.1 bits (62), Expect = 1.2
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -2
Query: 129 SKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVF 28
+KY T E+V+ +N++ SNY++ R++VF
Sbjct: 189 TKYELELTDSEVVIDKNSDDPNASNYKSHRLIVF 222
>Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical
protein AC3.6 protein.
Length = 325
Score = 28.7 bits (61), Expect = 1.6
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1
Query: 361 LVLPAGPRTAPAHSGGGTPSRTLARTSSPGALISGALTSLTLP 233
L+ P GP P H G + + SPG + G L S+ LP
Sbjct: 103 LICPEGPPGRPGHPGHPGEDGSAGQPGSPGGV--GVLLSMKLP 143
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 27.9 bits (59), Expect = 2.8
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -1
Query: 394 SSPFRXHQRRILVLPAGPRTAPAHSGGGTPSRTLARTSSPGALISG 257
SS H RR G TA A GGGT T +S A SG
Sbjct: 28 SSTSSSHHRRPAQEMNGTSTATATGGGGTSGATTTASSGAPAASSG 73
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 27.9 bits (59), Expect = 2.8
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -1
Query: 394 SSPFRXHQRRILVLPAGPRTAPAHSGGGTPSRTLARTSSPGALISG 257
SS H RR G TA A GGGT T +S A SG
Sbjct: 76 SSTSSSHHRRPAQEMNGTSTATATGGGGTSGATTTASSGAPAASSG 121
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 27.9 bits (59), Expect = 2.8
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -1
Query: 394 SSPFRXHQRRILVLPAGPRTAPAHSGGGTPSRTLARTSSPGALISG 257
SS H RR G TA A GGGT T +S A SG
Sbjct: 28 SSTSSSHHRRPAQEMNGTSTATATGGGGTSGATTTASSGAPAASSG 73
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 27.9 bits (59), Expect = 2.8
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -1
Query: 394 SSPFRXHQRRILVLPAGPRTAPAHSGGGTPSRTLARTSSPGALISG 257
SS H RR G TA A GGGT T +S A SG
Sbjct: 76 SSTSSSHHRRPAQEMNGTSTATATGGGGTSGATTTASSGAPAASSG 121
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 27.9 bits (59), Expect = 2.8
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -1
Query: 394 SSPFRXHQRRILVLPAGPRTAPAHSGGGTPSRTLARTSSPGALISG 257
SS H RR G TA A GGGT T +S A SG
Sbjct: 28 SSTSSSHHRRPAQEMNGTSTATATGGGGTSGATTTASSGAPAASSG 73
>Z92849-6|CAB07429.2| 306|Caenorhabditis elegans Hypothetical
protein H12D21.7 protein.
Length = 306
Score = 27.1 bits (57), Expect = 5.0
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -1
Query: 340 RTAPAHSGGGTPSRTLARTSSPGALISGALTSLTLPNLVGMNGRLAQ 200
RT P +G ++T T + G+ ++GA+ S + ++G +G ++Q
Sbjct: 195 RTTPQFTGEEPLNKTFPDTKATGSHVTGAI-SFPMAKVIGPDGFISQ 240
>U97005-4|AAB52283.1| 314|Caenorhabditis elegans Hypothetical
protein F19F10.5 protein.
Length = 314
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = -1
Query: 340 RTAPAHSGGGTPSRTLARTSSPGALISGALTSLTLPNLVGMNGRLAQSAFIHTVTKTIQA 161
+++P+ S + +RT++ TSSP + + + L + M F+ T +QA
Sbjct: 233 QSSPSSSSNSSSARTMSATSSPTSSLEDVINPPVLIDPFQMQMAHITQTFLATQLPALQA 292
Query: 160 KTFPLNI 140
FP+ +
Sbjct: 293 --FPMQL 297
>AF016674-7|AAB66126.2| 415|Caenorhabditis elegans C-type lectin
protein 10 protein.
Length = 415
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 364 ILVLPAGPRTAPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 230
I +PAG +PA TP+ L+ + P + SG TS PN
Sbjct: 278 ICKIPAGVPCSPAPPV--TPTPNLSNCNGPRMMYSGVFTSPNYPN 320
>Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 26.6 bits (56), Expect = 6.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 317 RRHPLADPRSDQLTRGSHIRCADFFDAPQSRWNER 213
RR P + R TRG +R F+DA Q+ N++
Sbjct: 271 RRSPTSTHRPWTSTRGPFVRRLTFYDASQALINQK 305
>Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 26.6 bits (56), Expect = 6.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 317 RRHPLADPRSDQLTRGSHIRCADFFDAPQSRWNER 213
RR P + R TRG +R F+DA Q+ N++
Sbjct: 271 RRSPTSTHRPWTSTRGPFVRRLTFYDASQALINQK 305
>Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical
protein DY3.7 protein.
Length = 922
Score = 26.2 bits (55), Expect = 8.7
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -1
Query: 355 LPAGPRTAPAHSGGGTPSRTL--ARTSSPGALISGALTSLTLPNLVG 221
+P GP P PSRT AR S+P L++ + P +VG
Sbjct: 809 VPPGPGAQPRSGAASAPSRTTPSARPSAP-PLVAPQVAVAVPPGVVG 854
>L15347-1|AAA28142.1| 813|Caenorhabditis elegans raf proto-oncogene
protein.
Length = 813
Score = 26.2 bits (55), Expect = 8.7
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = -1
Query: 319 GGGTPSRTLARTSSPGALISGALTSLTLPNLVGMNGRLAQSAFIHTVTKTIQAKTFPLNI 140
G +PS T + S PG LI G T PN+ G +A +HT+ T P I
Sbjct: 386 GSNSPSSTCS--SPPGGLI-GQPTLGQSPNVSGSTTSSLVAAHLHTLPLTPPQSAPPQKI 442
Query: 139 S 137
S
Sbjct: 443 S 443
>AY493414-1|AAR86713.1| 769|Caenorhabditis elegans LIN-45 isoform 3
protein.
Length = 769
Score = 26.2 bits (55), Expect = 8.7
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = -1
Query: 319 GGGTPSRTLARTSSPGALISGALTSLTLPNLVGMNGRLAQSAFIHTVTKTIQAKTFPLNI 140
G +PS T + S PG LI G T PN+ G +A +HT+ T P I
Sbjct: 342 GSNSPSSTCS--SPPGGLI-GQPTLGQSPNVSGSTTSSLVAAHLHTLPLTPPQSAPPQKI 398
Query: 139 S 137
S
Sbjct: 399 S 399
>AY493413-1|AAR86712.1| 813|Caenorhabditis elegans LIN-45 isoform 2
protein.
Length = 813
Score = 26.2 bits (55), Expect = 8.7
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = -1
Query: 319 GGGTPSRTLARTSSPGALISGALTSLTLPNLVGMNGRLAQSAFIHTVTKTIQAKTFPLNI 140
G +PS T + S PG LI G T PN+ G +A +HT+ T P I
Sbjct: 386 GSNSPSSTCS--SPPGGLI-GQPTLGQSPNVSGSTTSSLVAAHLHTLPLTPPQSAPPQKI 442
Query: 139 S 137
S
Sbjct: 443 S 443
>AY455928-1|AAR26307.1| 813|Caenorhabditis elegans LIN-45 protein.
Length = 813
Score = 26.2 bits (55), Expect = 8.7
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = -1
Query: 319 GGGTPSRTLARTSSPGALISGALTSLTLPNLVGMNGRLAQSAFIHTVTKTIQAKTFPLNI 140
G +PS T + S PG LI G T PN+ G +A +HT+ T P I
Sbjct: 386 GSNSPSSTCS--SPPGGLI-GQPTLGQSPNVSGSTTSSLVAAHLHTLPLTPPQSAPPQKI 442
Query: 139 S 137
S
Sbjct: 443 S 443
>AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein.
Length = 922
Score = 26.2 bits (55), Expect = 8.7
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -1
Query: 355 LPAGPRTAPAHSGGGTPSRTL--ARTSSPGALISGALTSLTLPNLVG 221
+P GP P PSRT AR S+P L++ + P +VG
Sbjct: 809 VPPGPGAQPRSGAASAPSRTTPSARPSAP-PLVAPQVAVAVPPGVVG 854
>AC024204-7|AAM97982.1| 614|Caenorhabditis elegans Abnormal cell
lineage protein 45,isoform b protein.
Length = 614
Score = 26.2 bits (55), Expect = 8.7
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = -1
Query: 319 GGGTPSRTLARTSSPGALISGALTSLTLPNLVGMNGRLAQSAFIHTVTKTIQAKTFPLNI 140
G +PS T + S PG LI G T PN+ G +A +HT+ T P I
Sbjct: 428 GSNSPSSTCS--SPPGGLI-GQPTLGQSPNVSGSTTSSLVAAHLHTLPLTPPQSAPPQKI 484
Query: 139 S 137
S
Sbjct: 485 S 485
>AC024204-6|AAF36042.1| 813|Caenorhabditis elegans Abnormal cell
lineage protein 45,isoform a protein.
Length = 813
Score = 26.2 bits (55), Expect = 8.7
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = -1
Query: 319 GGGTPSRTLARTSSPGALISGALTSLTLPNLVGMNGRLAQSAFIHTVTKTIQAKTFPLNI 140
G +PS T + S PG LI G T PN+ G +A +HT+ T P I
Sbjct: 386 GSNSPSSTCS--SPPGGLI-GQPTLGQSPNVSGSTTSSLVAAHLHTLPLTPPQSAPPQKI 442
Query: 139 S 137
S
Sbjct: 443 S 443
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,622,043
Number of Sequences: 27780
Number of extensions: 195873
Number of successful extensions: 664
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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