Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1083
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0716 + 20088311-20088637,20088730-20089107 33 0.18
10_08_0718 + 20091001-20091327,20091426-20091806 32 0.42
10_08_0723 + 20111974-20112705 31 0.98
10_08_0710 + 20070655-20070990,20071074-20071469 31 0.98
10_08_0705 + 20032111-20032437,20032525-20032896 31 1.3
06_01_0996 + 7746358-7746493,7747102-7747262,7747586-7747647,774... 30 2.3
10_08_0709 + 20055748-20056077,20056169-20056534 29 3.0
10_08_0706 + 20034534-20034860,20034988-20035368 29 3.0
10_08_0708 + 20040482-20040808,20040906-20041280 29 3.9
10_08_0707 + 20037301-20037633,20037862-20038248 29 3.9
06_01_0455 - 3241217-3243176,3244426-3244670,3244869-3245255 29 3.9
05_03_0643 - 16515183-16515758,16516502-16516532,16516717-165167... 29 3.9
10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010 29 5.2
06_01_0897 - 6903294-6903401,6903781-6903855,6904239-6904379,690... 29 5.2
04_01_0519 + 6831912-6831978,6832333-6832488,6832748-6833098,683... 29 5.2
03_05_0250 - 22394024-22394148,22394379-22394940 29 5.2
12_02_0538 + 20134594-20136042 28 6.9
11_03_0064 + 9518810-9519164,9519533-9520359 28 6.9
06_03_0045 - 15844748-15845021,15846349-15846560 28 6.9
06_01_0983 - 7630651-7630683,7630717-7630942,7630993-7631234,763... 28 6.9
12_02_0348 - 17816851-17817387 28 9.1
12_02_0345 - 17767704-17768240 28 9.1
10_08_0714 + 20081801-20082130,20082205-20082597 28 9.1
10_08_0711 + 20073470-20073799,20073882-20074274 28 9.1
02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196 28 9.1
01_01_0485 - 3576989-3577173,3577476-3577795,3577895-3578178,357... 28 9.1
>10_08_0716 + 20088311-20088637,20088730-20089107
Length = 234
Score = 33.5 bits (73), Expect = 0.18
Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Frame = +3
Query: 180 SPYCLKVETWLRLAGIKYENVEHHAKYRSKK--------GQLPFVELNGEEIADSTFIIK 335
SP+ +V+ L G+ YEN+E K +S+ ++P + NG+ + +S I++
Sbjct: 16 SPFASRVKFVFHLKGLSYENIEEDLKNKSELLLKSNPVIKKVPVLLHNGKPLCESMVIVE 75
Query: 336 DLSEKYNKDLDAGLTSE--QRVISHAMISMIENHL 434
L E + + + ++ +R ++ +S I+N L
Sbjct: 76 YLDETFAAVGPSVVPADPYERAVARFWVSYIDNKL 110
>10_08_0718 + 20091001-20091327,20091426-20091806
Length = 235
Score = 32.3 bits (70), Expect = 0.42
Identities = 22/95 (23%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Frame = +3
Query: 180 SPYCLKVETWLRLAGIKYENVEHHAKYRSKK--------GQLPFVELNGEEIADSTFIIK 335
SP+ +V+ L G+ YEN+E K +S+ ++P + NG+ + +S I++
Sbjct: 16 SPFVSRVKFVFHLKGLSYENIEEDLKNKSELLLKSNPAIKKVPVLFHNGKPLCESMIIVE 75
Query: 336 DLSEKYNKDLDAGLTSE--QRVISHAMISMIENHL 434
+ E + + + ++ +R ++ +S I+N L
Sbjct: 76 YIDETFAGVGPSVVPTDAYERAVARFWVSYIDNKL 110
>10_08_0723 + 20111974-20112705
Length = 243
Score = 31.1 bits (67), Expect = 0.98
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Frame = +3
Query: 180 SPYCLKVETWLRLAGIKYENVEHHAKYRSK--------KGQLPFVELNGEEIADSTFIIK 335
SPY +V+ L L G+ YE VE +S ++P + NG+ IA+S I++
Sbjct: 19 SPYVNRVQIVLNLKGLSYEYVEEDLMNKSDLLLGSNPVHKKVPVLIHNGKPIAESRVIVE 78
Query: 336 DLSEKY 353
L E +
Sbjct: 79 YLDEAF 84
>10_08_0710 + 20070655-20070990,20071074-20071469
Length = 243
Score = 31.1 bits (67), Expect = 0.98
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Frame = +3
Query: 180 SPYCLKVETWLRLAGIKYENVEHHAKYRSK--------KGQLPFVELNGEEIADSTFIIK 335
SPY L+ + L G+ YENVE +S+ ++P + NG+ I +S I++
Sbjct: 19 SPYVLRAKFALSFKGLSYENVEEDLHNKSELLLSSNPVHKKVPVLIHNGKPICESQIIVE 78
Query: 336 DLSEKY 353
+ E +
Sbjct: 79 YVDEAF 84
>10_08_0705 + 20032111-20032437,20032525-20032896
Length = 232
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Frame = +3
Query: 180 SPYCLKVETWLRLAGIKYENVEHHAKYRSK--------KGQLPFVELNGEEIADSTFIIK 335
SPY L+V+ L L G+ YE VE +S ++P + NG+ + +S I++
Sbjct: 16 SPYVLRVKFALSLKGLSYEYVEEDLMNKSDLLLSSNPVNKKVPVLIHNGKPVCESQVILQ 75
Query: 336 DLSEKY 353
L E +
Sbjct: 76 YLDEAF 81
>06_01_0996 +
7746358-7746493,7747102-7747262,7747586-7747647,
7748142-7748595,7748994-7749134,7749444-7749633,
7749842-7750530,7750605-7750804,7751210-7751375,
7751850-7752046,7752162-7752396
Length = 876
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 387 QRVISHAMISMIENHLSWVILWWRAKYPDSVIK 485
+++++H M+S EN + W+ + W K PD +K
Sbjct: 843 KKLLTHKMLSFQENRVQWMQVLW-GKEPDPTLK 874
>10_08_0709 + 20055748-20056077,20056169-20056534
Length = 231
Score = 29.5 bits (63), Expect = 3.0
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Frame = +3
Query: 180 SPYCLKVETWLRLAGIKYENVEHHAKYRSK--------KGQLPFVELNGEEIADSTFIIK 335
SPY +V+ L G+ YE VE +S+ ++P + NG+ I +S I++
Sbjct: 17 SPYTHRVKLALSFKGLSYEYVEEDLSNKSELLLSTNPVHKKVPVLIHNGKPICESQVIVQ 76
Query: 336 DLSEKYNKDLDAGLTSE--QRVISHAMISMIENHL--SWV 443
L E++ + L S+ R I+ + I + L SW+
Sbjct: 77 YLDEEFPNSGVSLLPSDSYDRAIARFWAAYINDKLMPSWL 116
>10_08_0706 + 20034534-20034860,20034988-20035368
Length = 235
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Frame = +3
Query: 177 TSPYCLKVETWLRLAGIKYENVEHHAKYRSK--------KGQLPFVELNGEEIADSTFII 332
TSP+ L+V+ L G+ YE E +S+ ++P + NG+ I +S I+
Sbjct: 15 TSPFALRVKLALSFKGLSYEYAEEDLSNKSELLLSSNPVHKKVPVLIHNGKPICESQVIV 74
Query: 333 KDLSEKY 353
+ + E +
Sbjct: 75 QYIDEAF 81
>10_08_0708 + 20040482-20040808,20040906-20041280
Length = 233
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Frame = +3
Query: 180 SPYCLKVETWLRLAGIKYENVEHHAKYRSK--------KGQLPFVELNGEEIADSTFIIK 335
SP+ L+ + L G+ YE VE K +S+ ++P + NG+ + +S I++
Sbjct: 16 SPFALRAKLALSFKGLSYEYVEEDLKNKSELLLTSNPVHKKVPVLIHNGKPVCESQVIVQ 75
Query: 336 DLSEKY 353
+ E +
Sbjct: 76 YIDEAF 81
>10_08_0707 + 20037301-20037633,20037862-20038248
Length = 239
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = +3
Query: 180 SPYCLKVETWLRLAGIKYENVEHHAKYRSK--------KGQLPFVELNGEEIADSTFIIK 335
SP+ +VE L L G+ YE V+ +S+ ++P + NG+ + +S+ I++
Sbjct: 16 SPFVTRVELALGLKGLSYEYVKQDLVNKSELLLASNPVHKKIPVLIHNGKPVCESSIIVQ 75
Query: 336 DLSEKYNKDLDAG 374
+ E + D AG
Sbjct: 76 YIDEAF-PDAGAG 87
>06_01_0455 - 3241217-3243176,3244426-3244670,3244869-3245255
Length = 863
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 328 MKVLSAISSPFSSTNGSWPFLERYLA*CSTFSYL 227
+K L ++ PFS T GSW + + C F++L
Sbjct: 751 LKALEYLALPFSDTQGSWLTISNHGFRCLKFAFL 784
>05_03_0643 -
16515183-16515758,16516502-16516532,16516717-16516756,
16517183-16517243
Length = 235
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Frame = +2
Query: 293 TEWRRNSR*HF---HHQR--SFREIQQRS*CWSDVG--AAGYISRHDLHDREPPVVGDSL 451
T++ N R HF HH +++++S S++ A I+R+D D+ PV+ +L
Sbjct: 27 TDYLANIRVHFLRSHHSTVGKVSKMEEKSSAMSNIAPVAPTRITRYDKDDKHKPVIVCAL 86
Query: 452 VARQVPGQ 475
A +P Q
Sbjct: 87 AALPIPSQ 94
>10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010
Length = 520
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 222 GIKYENVEHHAKYRSKKGQLPFVELNGEE 308
G KYE +HH+K+ KK + E+ GEE
Sbjct: 60 GEKYETDDHHSKHGHKKRKHSGCEIVGEE 88
>06_01_0897 -
6903294-6903401,6903781-6903855,6904239-6904379,
6904496-6904646,6905035-6905178,6905276-6905366,
6906071-6906308
Length = 315
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 264 SKKGQLPFVELNGEEIADSTFIIKDLSEKY 353
S +G++P V+L + +ADS I + + EKY
Sbjct: 115 SPEGKVPIVKLEEQWVADSDVITQAIEEKY 144
>04_01_0519 +
6831912-6831978,6832333-6832488,6832748-6833098,
6833481-6833662,6833756-6834004,6834182-6834406,
6837492-6837791,6838642-6839215,6839959-6840059
Length = 734
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/86 (25%), Positives = 37/86 (43%)
Frame = -1
Query: 318 YRLFLRHSVPRTAVGLFWNDIWHDALRSRT*CRPNEAMFQLLSNMGMSTVTKECAKIDRD 139
+R + ++ A LFWND+W+D + + PN L N + T+ + D
Sbjct: 607 FRGIAKCTIQSGATALFWNDLWNDDFKCTS--YPNLFSVTLYKNDSVRTMCLRPME-DSF 663
Query: 138 ILRLSQNLFYGLLVSAELVRIFSLQI 61
+L LS + L E + LQ+
Sbjct: 664 VLPLSDDACGEFLQLQEELNHLQLQL 689
>03_05_0250 - 22394024-22394148,22394379-22394940
Length = 228
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -1
Query: 273 LFWNDIWHDALRSRT*CRPNEAMFQLLSNMGMSTVTKECAKIDRDILRL 127
LFW+D+W+D +RS T P+ ++ N ++ CAK D +L
Sbjct: 79 LFWDDMWNDQIRSIT--YPHLCGHAIVRNESLAVT---CAKPFEDCFKL 122
>12_02_0538 + 20134594-20136042
Length = 482
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -3
Query: 346 SERSLMMKVLSAISSPFSST----NGSWPFLERYLA*CSTFSYLMPAKRSHVSTFKQYGD 179
S SL+ K L I + ST G WP E L CS FS L + ++ + + G+
Sbjct: 23 SSLSLVSKRLYTIDAEHRSTIRVGRGLWPAKEALLTLCSRFSNLRKVEINYHDSTRGDGN 82
Query: 178 VDGNKGV 158
N+G+
Sbjct: 83 QIDNQGL 89
>11_03_0064 + 9518810-9519164,9519533-9520359
Length = 393
Score = 28.3 bits (60), Expect = 6.9
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +3
Query: 165 LLPSTSPYCLKVETWLRLAGIKYENVEHHAKYRSKKGQLPFVELNGEEIAD---STFIIK 335
+L S S Y + L A +E ++ Y G+LP V ++ EEI T ++
Sbjct: 186 ILNSLSEYFHLINGSLMPANEDHEVIQQKPIYVVFDGKLPGVYISFEEIVAQKIDTKLMG 245
Query: 336 DLSEKYNKDLDAGLTSEQRVI 398
+S K KD+D L+ ++++
Sbjct: 246 GISWKKYKDIDEALSQARKIL 266
>06_03_0045 - 15844748-15845021,15846349-15846560
Length = 161
Score = 28.3 bits (60), Expect = 6.9
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -1
Query: 273 LFWNDIWHDALRS 235
LFW+DIW+D +RS
Sbjct: 85 LFWDDIWNDKIRS 97
>06_01_0983 -
7630651-7630683,7630717-7630942,7630993-7631234,
7631502-7631591,7631680-7631845,7632225-7633191,
7633402-7633591,7633908-7634048,7634416-7634736
Length = 791
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = +3
Query: 387 QRVISHAMISMIENHLSWVILWWRAKYPDSVIKGYQVN 500
+++++H M+S N + W+ + W K PD +K ++
Sbjct: 750 KKLLTHKMLSFQGNRVQWMQVLW-GKEPDPTLKNQHIS 786
>12_02_0348 - 17816851-17817387
Length = 178
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 325 KVLSAISSPFSSTNGSWPFLERY-LA*CSTFSYLMPAKRSHVSTFKQYGDVDGNKGVRE 152
K+ ++S F+ N + F E + L CSTF L ++T ++ G V+G+KG E
Sbjct: 83 KIQQEVNSLFAQLNPN--FSENFILPKCSTFVLLRFTPEDIITTPRRMGYVEGDKGYVE 139
>12_02_0345 - 17767704-17768240
Length = 178
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 325 KVLSAISSPFSSTNGSWPFLERY-LA*CSTFSYLMPAKRSHVSTFKQYGDVDGNKGVRE 152
K+ ++S F+ N + F E + L CSTF L ++T ++ G V+G+KG E
Sbjct: 83 KIQQEVNSLFAQLNPN--FSENFILPKCSTFVLLRFTPEDIITTPRRMGYVEGDKGYVE 139
>10_08_0714 + 20081801-20082130,20082205-20082597
Length = 240
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Frame = +3
Query: 180 SPYCLKVETWLRLAGIKYENV--EHHAKYRSK--------KGQLPFVELNGEEIADSTFI 329
SPY +V+ L L G+ YE V E H +S+ ++P + NG+ I +S I
Sbjct: 15 SPYVSRVKLALHLKGLSYEYVVEEDHFNNKSELLLSSNPVHKKVPVMIHNGKPICESLII 74
Query: 330 IKDLSEKY 353
++ L E +
Sbjct: 75 MEYLDEAF 82
>10_08_0711 + 20073470-20073799,20073882-20074274
Length = 240
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Frame = +3
Query: 180 SPYCLKVETWLRLAGIKYENVEHHAKYRSK--------KGQLPFVELNGEEIADSTFIIK 335
SPY + + L+L G+ YE +E +S +P + NG I +S+ I++
Sbjct: 17 SPYVSRAKLALQLKGVSYEYIEEDLGNKSDLFLRSNPVHKTVPVLIHNGNPICESSIIVQ 76
Query: 336 DLSEKYNKDLDAGLTSE--QRVISHAMISMIENHLS 437
+ E + + L ++ R ++ + I++ L+
Sbjct: 77 YIDESFPSSAASLLPADPYDRAVARFWAAYIDDKLA 112
>02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196
Length = 933
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 165 LLPSTSPYCLKVETWLRLAGIKYENVEHHAKYRSKKGQLPFVELNGEEIADSTF---IIK 335
+L S S Y + L A +E ++ Y G+LP V ++ EEI ++
Sbjct: 726 ILNSLSEYFYLINGSLMPANEDHEVIQQKPIYVVFDGKLPGVYISFEEIVAQKIDAKLMG 785
Query: 336 DLSEKYNKDLDAGLTSEQRVI 398
+S K KD+D L+ ++++
Sbjct: 786 GISWKKYKDIDEALSQARKIL 806
>01_01_0485 -
3576989-3577173,3577476-3577795,3577895-3578178,
3579780-3580095,3580441-3580859
Length = 507
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 575 GYEKRPELTESACTVKMK*LNFGK 646
GYE+RPE T+ T ++ +FG+
Sbjct: 382 GYERRPEQTKETMTTPLRLFDFGR 405
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,596,291
Number of Sequences: 37544
Number of extensions: 450030
Number of successful extensions: 1277
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1277
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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