Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1083
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070234-1|AAL58538.1|  223|Anopheles gambiae glutathione S-tran...    27   0.47 
AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...    25   1.9  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    25   2.5  

>AY070234-1|AAL58538.1|  223|Anopheles gambiae glutathione
           S-transferase E3 protein.
          Length = 223

 Score = 27.5 bits (58), Expect = 0.47
 Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 14/112 (12%)
 Frame = +3

Query: 228 KYENVEHHAKYRSKKGQLPFVELNGEEIADSTFIIKDLSEKYNKD------LDAGLTSEQ 389
           K EN+       +    +P V  NG  + DS  II  L +KY KD       D    +  
Sbjct: 38  KKENMTEEYLKMNPMHTVPTVNDNGVPLYDSHAIINYLVQKYAKDDTLYPAKDLVKQANI 97

Query: 390 RVISHAMISMIENHLSWVI----LWWRAKYP----DSVIKGYQVNLQSALNT 521
             + H    ++   L W++     W + + P    DSV K Y + L++ L T
Sbjct: 98  NALLHFESGVLFARLRWILEPVFYWGQTEVPQEKIDSVHKAYDL-LEATLKT 148


>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -3

Query: 718 GELVRRQRRMVGRLSRSESTRXIVLPKIQLFHLDCARR 605
           G ++R QR+  G + R+ + +    PK++  HLD A R
Sbjct: 2   GRVIRAQRKGAGSVFRAHTKKRKGQPKLR--HLDYAER 37


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 631 IEFWEERFXVCSLICLTDRPFFF 699
           IEFW+     C LICL   P ++
Sbjct: 405 IEFWDGGRDFCFLICLFSFPRYY 427


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 797,624
Number of Sequences: 2352
Number of extensions: 16750
Number of successful extensions: 55
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)