Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1080
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    24   1.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.2  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   5.5  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   5.5  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   9.7  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +3

Query: 9   KVCCLILRLYPNIVLNFLRL 68
           +VC  ++++YP +V+N + L
Sbjct: 168 EVCTFVVQVYPRLVVNTINL 187


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 439 LTASSRNLTSYVQQVSNKSNSNESTMLV 522
           +T+ S   TS     SNK NS++  ML+
Sbjct: 423 ITSPSNTNTSTSSTNSNKPNSSDLNMLI 450


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 697 LTVIENCFSGHFFLHHRA 644
           L++++NC S  F L+H A
Sbjct: 277 LSIVKNCLSYCFNLYHLA 294


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 697 LTVIENCFSGHFFLHHRA 644
           L++++NC S  F L+H A
Sbjct: 277 LSIVKNCLSYCFNLYHLA 294


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/46 (21%), Positives = 17/46 (36%)
 Frame = +3

Query: 153 RLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNE 290
           R W +D +  +     L I        + K+  L     +C L N+
Sbjct: 302 RAWAMDDESDINGTPPLHISGPAEAGPLTKDAGLLSYPEICTLLND 347


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,211
Number of Sequences: 336
Number of extensions: 3225
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)